RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 CAPN14A8MX76 684 aa19.64■□□□□ 0.73
HERPUD2-201ENST00000311350 ATP2A1O14983 1001 aa19.64■□□□□ 0.73
HERPUD2-201ENST00000311350 TM7SF2O76062 418 aa19.64■□□□□ 0.73
HERPUD2-201ENST00000311350 ITGAVP06756 1048 aa19.64■□□□□ 0.73
HERPUD2-201ENST00000311350 TCF4P15884 667 aa19.64■□□□□ 0.73
HERPUD2-201ENST00000311350 NLRX1Q86UT6 975 aa19.64■□□□□ 0.73
HERPUD2-201ENST00000311350 ERO1BQ86YB8 467 aa19.64■□□□□ 0.73
HERPUD2-201ENST00000311350 RMDN3Q96TC7 470 aa19.64■□□□□ 0.73
HERPUD2-201ENST00000311350 PCDH9Q9HC56 1237 aa19.64■□□□□ 0.73
HERPUD2-201ENST00000311350 IL1RAPL1Q9NZN1 696 aa19.64■□□□□ 0.73
HERPUD2-201ENST00000311350 PPARGC1AQ9UBK2 798 aaKnown RBP19.64■□□□□ 0.73
HERPUD2-201ENST00000311350 PCDHB4Q9Y5E5 795 aa19.64■□□□□ 0.73
HERPUD2-201ENST00000311350 CIB2O75838 187 aa19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 GLRA2P23416 452 aa19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 MAGEA8P43361 318 aa19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 TAP1Q03518 808 aa19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 CENPUQ71F23 418 aa19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 PCGF5Q86SE9 256 aa19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 ZNF513Q8N8E2 541 aaPredicted RBP19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 MTBPQ96DY7 904 aa19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 WDR83Q9BRX9 315 aaKnown RBP19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 XPNPEP1Q9NQW7 623 aa19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 DDX18Q9NVP1 670 aaKnown RBP19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 DDX56Q9NY93 547 aaKnown RBP19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 BLOC1S6Q9UL45 172 aa19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 PCDHGA4Q9Y5G9 962 aa19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 TMEM191CA6NGB0 347 aa19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 VNN1O95497 513 aa19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 CALB1P05937 261 aa19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 TMEM191BP0C7N4 346 aa19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 MYCLP12524 364 aaPredicted RBP19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 CCND2P30279 289 aa19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 LIG4P49917 911 aa19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 ZNF132P52740 706 aa19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 VCPP55072 806 aaKnown RBP19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 OASLQ15646 514 aaKnown RBP19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 FNBP1LQ5T0N5 605 aa19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 RNASEH2BQ5TBB1 312 aaKnown RBP19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 NME8Q8N427 588 aa19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 MS4A4AQ96JQ5 239 aa19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 SERAC1Q96JX3 654 aa19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 CCDC28BQ9BUN5 200 aa19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 CFHR5Q9BXR6 569 aa19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 RAVER2Q9HCJ3 691 aaKnown RBP19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.63■□□□□ 0.73
HERPUD2-201ENST00000311350 TESPA1A2RU30 521 aaPredicted RBP19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 LSM8O95777 96 aaKnown RBP19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 LDHAP00338 332 aaKnown RBP19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 IFNB1P01574 187 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 KITP10721 976 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 MMP8P22894 467 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 PDE1BQ01064 536 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 MED21Q13503 144 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 TRMT5Q32P41 509 aaKnown RBP19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 FAM182AQ5T1J6 154 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 ARHGEF16Q5VV41 709 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 SLFN12LQ6IEE8 588 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 USP6NLQ92738 828 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 MIS12Q9H081 205 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 GABBR1Q9UBS5 961 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 ADAMTS6Q9UKP5 1117 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 EFR3BQ9Y2G0 817 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 ARID2Q68CP9 1835 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 LPXNO60711 386 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 PSAPP07602 524 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 TSHRP16473 764 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 TNNI1P19237 187 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 GTF2A2P52657 109 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 NCOA4Q13772 614 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 HNRNPDQ14103 355 aaKnown RBP19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 ANKRD22Q5VYY1 191 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 ADGRD1Q6QNK2 874 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 SPOCD1Q6ZMY3 1216 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 C3orf62Q6ZUJ4 267 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 VSIG10LQ86VR7 867 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 UBR7Q8N806 425 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 CGRRF1Q99675 332 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 MECRQ9BV79 373 aa19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 APOBEC3GQ9HC16 384 aaKnown RBP19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 MARCOQ9UEW3 520 aaPredicted RBP19.62■□□□□ 0.73
HERPUD2-201ENST00000311350 TM9SF1O15321 606 aa19.61■□□□□ 0.73
HERPUD2-201ENST00000311350 KRT1P04264 644 aa19.61■□□□□ 0.73
HERPUD2-201ENST00000311350 ATF7P17544 494 aaPredicted RBP19.61■□□□□ 0.73
HERPUD2-201ENST00000311350 MAP7Q14244 749 aa19.61■□□□□ 0.73
HERPUD2-201ENST00000311350 CES4AQ5XG92 561 aa19.61■□□□□ 0.73
HERPUD2-201ENST00000311350 NIPA2Q8N8Q9 360 aa19.61■□□□□ 0.73
HERPUD2-201ENST00000311350 DCAKDQ8WVC6 231 aa19.61■□□□□ 0.73
HERPUD2-201ENST00000311350 ACSF2Q96CM8 615 aaPredicted RBP19.61■□□□□ 0.73
HERPUD2-201ENST00000311350 AGO2Q9UKV8 859 aaKnown RBP19.61■□□□□ 0.73
HERPUD2-201ENST00000311350 A0A0J9YVX5 310 aa19.61■□□□□ 0.73
HERPUD2-201ENST00000311350 TCRBV5S1A1TA0A578 114 aa19.61■□□□□ 0.73
HERPUD2-201ENST00000311350 TXNDC9O14530 226 aa19.61■□□□□ 0.73
HERPUD2-201ENST00000311350 VILLO15195 856 aa19.61■□□□□ 0.73
HERPUD2-201ENST00000311350 CFHP08603 1231 aa19.61■□□□□ 0.73
HERPUD2-201ENST00000311350 VCLP18206 1134 aa19.61■□□□□ 0.73
HERPUD2-201ENST00000311350 PEX2P28328 305 aa19.61■□□□□ 0.73
HERPUD2-201ENST00000311350 ETV4P43268 484 aa19.61■□□□□ 0.73
HERPUD2-201ENST00000311350 ZFYVE27Q5T4F4 411 aa19.61■□□□□ 0.73
HERPUD2-201ENST00000311350 FBXL19Q6PCT2 694 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms