RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 SAYSD1Q9NPB0 183 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 CYLDQ9NQC7 956 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 SYBUQ9NX95 663 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 CORO2BQ9UQ03 480 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 EIF3LQ9Y262 564 aaKnown RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 A0A0A6YYK5 440 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 IRF6O14896 467 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 VPS4BO75351 444 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ALPPL2P10696 532 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 GRK2P25098 689 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 YWHAQP27348 245 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ADORA2AP29274 412 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ACOT2P49753 483 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 POU4F1Q01851 419 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ADCY1Q08828 1119 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 KCNA1Q09470 495 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 USP41Q3LFD5 358 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ATAT1Q5SQI0 421 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 FAM182BQ5T319 152 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 FAM47EQ6ZV65 393 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 DHX40Q8IX18 779 aaKnown RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ST13P4Q8IZP2 240 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 DIS3LQ8TF46 1054 aaKnown RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 DDI1Q8WTU0 396 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 SLC22A17Q8WUG5 538 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 RIPOR3Q96MK2 946 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 SLC28A3Q9HAS3 691 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 KRT84Q9NSB2 600 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 TMEM161AQ9NX61 479 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ZNF232Q9UNY5 417 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 MRPS33Q9Y291 106 aaKnown RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 GIT1Q9Y2X7 761 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ARIH1Q9Y4X5 557 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 RNF103-CHMP3A0A140T963 221 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 SPDYE5A6NIY4 337 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 CES2O00748 559 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 CYB561D2O14569 222 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ITGB3P05106 788 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 RHOCP08134 193 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 GNSP15586 552 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 KLRC1P26715 233 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 TLX1P31314 330 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 PFKPQ01813 784 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 NCAPHQ15003 741 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 E2F4Q16254 413 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 SPDYE7PQ495Y7 208 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ATAD3BQ5T9A4 648 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 NIPAL1Q6NVV3 410 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 INTS5Q6P9B9 1019 aaKnown RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 PAGE2Q7Z2X7 111 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 C16orf62Q7Z3J2 963 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 FMR1NBQ8N0W7 255 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 CLYBLQ8N0X4 340 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ICA1LQ8NDH6 482 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 CDC26Q8NHZ8 85 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 CASS4Q9NQ75 786 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 TAS2R13Q9NYV9 303 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 SEPT3Q9UH03 358 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 LIMA1Q9UHB6 759 aaKnown RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 PLAGL2Q9UPG8 496 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 C15orf38-AP3S2A0A0A6YYH1 394 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 TTLL8A6PVC2 850 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ZNF862O60290 1169 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 NDUFS2O75306 463 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 PALMO75781 387 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 GRAP2O75791 330 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 BAG2O95816 211 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 AGTP01019 485 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 SNRPAP09012 282 aaKnown RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ADORA2BP29275 332 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 RAP1GDS1P52306 607 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 C1DQ13901 141 aaKnown RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ARPINQ7Z6K5 226 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 APLFQ8IW19 511 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 PPIL6Q8IXY8 311 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 NFKBIZQ9BYH8 718 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 VPS11Q9H270 941 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 RGS18Q9NS28 235 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ABI2Q9NYB9 513 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 C2CD2Q9Y426 696 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 VSTM5A8MXK1 200 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 PHF2O75151 1096 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 ENTPD5O75356 428 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 LCP1P13796 627 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 POLR2EP19388 210 aaKnown RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 RFC2P35250 354 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 CDK7P50613 346 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 C1QBPQ07021 282 aaKnown RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 FSTL1Q12841 308 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 NAB1Q13506 487 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 HIC1Q14526 733 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 SETMARQ53H47 684 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 CATSPER3Q86XQ3 398 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 RBBP8NLQ8NC74 664 aaPredicted RBP3.29□□□□□ -1.88
CLOCK-201ENST00000309964 PPTC7Q8NI37 304 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 INPP5DQ92835 1189 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 TIFAQ96CG3 184 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 BBS4Q96RK4 519 aa3.29□□□□□ -1.88
CLOCK-201ENST00000309964 DYRK1BQ9Y463 629 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms