RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 HSP90AA4PQ58FG1 418 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 HERC4Q5GLZ8 1057 aaPredicted RBP5.29□□□□□ -1.56
CKS1B-201ENST00000308987 CRB2Q5IJ48 1285 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 EARS2Q5JPH6 523 aaKnown RBP5.29□□□□□ -1.56
CKS1B-201ENST00000308987 BICRALQ6AI39 1079 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 CNNM4Q6P4Q7 775 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 CRTC3Q6UUV7 619 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 GBP6Q6ZN66 633 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 GK5Q6ZS86 529 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 ADGRD2Q7Z7M1 963 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 BLIDQ8IZY5 108 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 MMGT1Q8N4V1 131 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 SRBD1Q8N5C6 995 aaKnown RBP5.29□□□□□ -1.56
CKS1B-201ENST00000308987 TMEM52Q8NDY8 209 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 CPLX3Q8WVH0 158 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 LMBR1Q8WVP7 490 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 ZNF689Q96CS4 500 aaPredicted RBP5.29□□□□□ -1.56
CKS1B-201ENST00000308987 MSLNLQ96KJ4 702 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 JMJD8Q96S16 334 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 PNKPQ96T60 521 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 YME1L1Q96TA2 773 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 MPHOSPH6Q99547 160 aaKnown RBP5.29□□□□□ -1.56
CKS1B-201ENST00000308987 KATNAL1Q9BW62 490 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 IFIH1Q9BYX4 1025 aaKnown RBP5.29□□□□□ -1.56
CKS1B-201ENST00000308987 TTYH3Q9C0H2 523 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 MAF1Q9H063 256 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 VPS16Q9H269 839 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 EHMT1Q9H9B1 1298 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 PDE11AQ9HCR9 933 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 TMEM51Q9NW97 253 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 CLEC1BQ9P126 229 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 MAGEC2Q9UBF1 373 aaPredicted RBP5.29□□□□□ -1.56
CKS1B-201ENST00000308987 RNF14Q9UBS8 474 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 PRKAG3Q9UGI9 489 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 PUF60Q9UHX1 559 aaKnown RBP5.29□□□□□ -1.56
CKS1B-201ENST00000308987 FEZ2Q9UHY8 353 aaPredicted RBP5.29□□□□□ -1.56
CKS1B-201ENST00000308987 PNMA2Q9UL42 364 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 MRPL11Q9Y3B7 192 aaKnown RBP5.29□□□□□ -1.56
CKS1B-201ENST00000308987 SAR1BQ9Y6B6 198 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 CACNA1IQ9P0X4 2223 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 NCOR2Q9Y618 2525 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 CACNA1BQ00975 2339 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 OTOGLQ3ZCN5 2332 aa5.29□□□□□ -1.56
CKS1B-201ENST00000308987 EMSYQ7Z589 1322 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 FANCMQ8IYD8 2048 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 PVALEFA0A1B0GWK0 134 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 C17orf102A2RUQ5 167 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 B4DLN1 442 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 KLRF2D3W0D1 207 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 hCG_1984214I3L0E3 225 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 ENPP3O14638 875 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 SLC26A4O43511 780 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 KLRC4O43908 158 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 USO1O60763 962 aaKnown RBP5.28□□□□□ -1.56
CKS1B-201ENST00000308987 SHOX2O60902 331 aaPredicted RBP5.28□□□□□ -1.56
CKS1B-201ENST00000308987 ATP9AO75110 1047 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 CSPG5O95196 566 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 LCA5LO95447 670 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 FGFR1OPO95684 399 aaKnown RBP5.28□□□□□ -1.56
CKS1B-201ENST00000308987 GSTM1P09488 218 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 GHRP10912 638 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 TNFRSF8P28908 595 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 ICAM3P32942 547 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 CTNNB1P35222 781 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 BMPR1AP36894 532 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 CCT6AP40227 531 aaKnown RBP5.28□□□□□ -1.56
CKS1B-201ENST00000308987 UBA7P41226 1012 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 STAT6P42226 847 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 LMAN1P49257 510 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 GATMP50440 423 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 MRPL12P52815 198 aaKnown RBP5.28□□□□□ -1.56
CKS1B-201ENST00000308987 ADAM15Q13444 863 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 GRM4Q14833 912 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 GLE1Q53GS7 698 aaKnown RBP5.28□□□□□ -1.56
CKS1B-201ENST00000308987 MARCH8Q5T0T0 291 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 CCDC122Q5T0U0 273 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 CWF19L1Q69YN2 538 aaKnown RBP5.28□□□□□ -1.56
CKS1B-201ENST00000308987 TTI2Q6NXR4 508 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 WDR59Q6PJI9 974 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 CCNI2Q6ZMN8 369 aaPredicted RBP5.28□□□□□ -1.56
CKS1B-201ENST00000308987 EP400NLQ6ZTU2 488 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 SRLQ86TD4 932 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 MCF2L2Q86YR7 1114 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 ZNF713Q8N859 430 aaPredicted RBP5.28□□□□□ -1.56
CKS1B-201ENST00000308987 C1orf131Q8NDD1 294 aaKnown RBP5.28□□□□□ -1.56
CKS1B-201ENST00000308987 ACRBPQ8NEB7 543 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 VN1R2Q8NFZ6 395 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 TRIM58Q8NG06 486 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 NEK11Q8NG66 645 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 COG1Q8WTW3 980 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 SEPT8Q92599 483 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 INPP4AQ96PE3 977 aaPredicted RBP5.28□□□□□ -1.56
CKS1B-201ENST00000308987 PIGSQ96S52 555 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 C7orf25Q9BPX7 421 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 AMNQ9BXJ7 453 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 LRRC27Q9C0I9 530 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 EPC1Q9H2F5 836 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 RIOX1Q9H6W3 641 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 KAT14Q9H8E8 782 aa5.28□□□□□ -1.56
CKS1B-201ENST00000308987 AGO3Q9H9G7 860 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms