RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 LRRC4CQ9HCJ2 640 aa20.27■□□□□ 0.83
HOXC4-201ENST00000303406 MIOSQ9NXC5 875 aa20.27■□□□□ 0.83
HOXC4-201ENST00000303406 SRRDQ9UH36 339 aa20.27■□□□□ 0.83
HOXC4-201ENST00000303406 DDX20Q9UHI6 824 aaKnown RBP20.27■□□□□ 0.83
HOXC4-201ENST00000303406 CDH9Q9ULB4 789 aa20.27■□□□□ 0.83
HOXC4-201ENST00000303406 PTCH2Q9Y6C5 1203 aa20.27■□□□□ 0.83
HOXC4-201ENST00000303406 MEIS3P2A8K0S8 358 aa20.26■□□□□ 0.83
HOXC4-201ENST00000303406 KIF3CO14782 793 aa20.26■□□□□ 0.83
HOXC4-201ENST00000303406 APOL1O14791 398 aa20.26■□□□□ 0.83
HOXC4-201ENST00000303406 INPPL1O15357 1258 aa20.26■□□□□ 0.83
HOXC4-201ENST00000303406 FBXO21O94952 628 aa20.26■□□□□ 0.83
HOXC4-201ENST00000303406 RBP3P10745 1247 aa20.26■□□□□ 0.83
HOXC4-201ENST00000303406 LCP1P13796 627 aa20.26■□□□□ 0.83
HOXC4-201ENST00000303406 ETS1P14921 441 aa20.26■□□□□ 0.83
HOXC4-201ENST00000303406 PECAM1P16284 738 aaPredicted RBP20.26■□□□□ 0.83
HOXC4-201ENST00000303406 ZFXP17010 805 aaPredicted RBP20.26■□□□□ 0.83
HOXC4-201ENST00000303406 IL4RP24394 825 aa20.26■□□□□ 0.83
HOXC4-201ENST00000303406 MATKP42679 507 aa20.26■□□□□ 0.83
HOXC4-201ENST00000303406 MMP13P45452 471 aa20.26■□□□□ 0.83
HOXC4-201ENST00000303406 ROR1Q01973 937 aa20.26■□□□□ 0.83
HOXC4-201ENST00000303406 ADCY1Q08828 1119 aa20.26■□□□□ 0.83
HOXC4-201ENST00000303406 KYNUQ16719 465 aa20.26■□□□□ 0.83
HOXC4-201ENST00000303406 ANKRD20A8PQ5CZ79 823 aa20.26■□□□□ 0.83
HOXC4-201ENST00000303406 UBAP2Q5T6F2 1119 aaKnown RBP20.26■□□□□ 0.83
HOXC4-201ENST00000303406 PAQR9Q6ZVX9 377 aa20.26■□□□□ 0.83
HOXC4-201ENST00000303406 PRUNE1Q86TP1 453 aa20.26■□□□□ 0.83
HOXC4-201ENST00000303406 RIBC1Q8N443 379 aaPredicted RBP20.26■□□□□ 0.83
HOXC4-201ENST00000303406 P3H4Q92791 437 aa20.26■□□□□ 0.83
HOXC4-201ENST00000303406 RTP4Q96DX8 246 aa20.26■□□□□ 0.83
HOXC4-201ENST00000303406 UROC1Q96N76 676 aa20.26■□□□□ 0.83
HOXC4-201ENST00000303406 SYT15Q9BQS2 421 aa20.26■□□□□ 0.83
HOXC4-201ENST00000303406 EPN3Q9H201 632 aa20.26■□□□□ 0.83
HOXC4-201ENST00000303406 PPCSQ9HAB8 311 aa20.26■□□□□ 0.83
HOXC4-201ENST00000303406 RNF186Q9NXI6 227 aa20.26■□□□□ 0.83
HOXC4-201ENST00000303406 DDX43Q9NXZ2 648 aaKnown RBP20.26■□□□□ 0.83
HOXC4-201ENST00000303406 RCOR3Q9P2K3 495 aaPredicted RBP20.26■□□□□ 0.83
HOXC4-201ENST00000303406 PRDM4Q9UKN5 801 aa20.26■□□□□ 0.83
HOXC4-201ENST00000303406 ALOX15BO15296 676 aa20.25■□□□□ 0.83
HOXC4-201ENST00000303406 ACSL3O95573 720 aa20.25■□□□□ 0.83
HOXC4-201ENST00000303406 FAM200BP0CF97 657 aa20.25■□□□□ 0.83
HOXC4-201ENST00000303406 CD52P31358 61 aa20.25■□□□□ 0.83
HOXC4-201ENST00000303406 HNRNPH2P55795 449 aaKnown RBP20.25■□□□□ 0.83
HOXC4-201ENST00000303406 MRPS5P82675 430 aaKnown RBP20.25■□□□□ 0.83
HOXC4-201ENST00000303406 GRIK3Q13003 919 aa20.25■□□□□ 0.83
HOXC4-201ENST00000303406 LPIN1Q14693 890 aa20.25■□□□□ 0.83
HOXC4-201ENST00000303406 RAB6CQ53S08 254 aa20.25■□□□□ 0.83
HOXC4-201ENST00000303406 SCYL2Q6P3W7 929 aa20.25■□□□□ 0.83
HOXC4-201ENST00000303406 DSTYKQ6XUX3 929 aa20.25■□□□□ 0.83
HOXC4-201ENST00000303406 CENPUQ71F23 418 aa20.25■□□□□ 0.83
HOXC4-201ENST00000303406 TAOK1Q7L7X3 1001 aa20.25■□□□□ 0.83
HOXC4-201ENST00000303406 BNIPLQ7Z465 357 aa20.25■□□□□ 0.83
HOXC4-201ENST00000303406 EPS8L3Q8TE67 593 aaKnown RBP20.25■□□□□ 0.83
HOXC4-201ENST00000303406 RAB6CQ9H0N0 254 aa20.25■□□□□ 0.83
HOXC4-201ENST00000303406 LGALS13Q9UHV8 139 aa20.25■□□□□ 0.83
HOXC4-201ENST00000303406 TLDC2A0PJX2 215 aa20.24■□□□□ 0.83
HOXC4-201ENST00000303406 MOXD2PA6NHM9 499 aa20.24■□□□□ 0.83
HOXC4-201ENST00000303406 IFNB1P01574 187 aa20.24■□□□□ 0.83
HOXC4-201ENST00000303406 TSHRP16473 764 aa20.24■□□□□ 0.83
HOXC4-201ENST00000303406 RPL22P35268 128 aaKnown RBP20.24■□□□□ 0.83
HOXC4-201ENST00000303406 SCNN1GP51170 649 aa20.24■□□□□ 0.83
HOXC4-201ENST00000303406 CLCNKBP51801 687 aa20.24■□□□□ 0.83
HOXC4-201ENST00000303406 GUCY1A3Q02108 690 aa20.24■□□□□ 0.83
HOXC4-201ENST00000303406 MMRN1Q13201 1228 aa20.24■□□□□ 0.83
HOXC4-201ENST00000303406 ITGA7Q13683 1181 aa20.24■□□□□ 0.83
HOXC4-201ENST00000303406 UPP1Q16831 310 aa20.24■□□□□ 0.83
HOXC4-201ENST00000303406 SLC25A52Q3SY17 297 aa20.24■□□□□ 0.83
HOXC4-201ENST00000303406 CLEC20AQ6ZU45 233 aa20.24■□□□□ 0.83
HOXC4-201ENST00000303406 PQLC3Q8N755 202 aa20.24■□□□□ 0.83
HOXC4-201ENST00000303406 PLD5Q8N7P1 536 aa20.24■□□□□ 0.83
HOXC4-201ENST00000303406 NAT8LQ8N9F0 302 aa20.24■□□□□ 0.83
HOXC4-201ENST00000303406 PXYLP1Q8TE99 480 aa20.24■□□□□ 0.83
HOXC4-201ENST00000303406 CLEC4CQ8WTT0 213 aa20.24■□□□□ 0.83
HOXC4-201ENST00000303406 LPPQ93052 612 aa20.24■□□□□ 0.83
HOXC4-201ENST00000303406 NT5C3BQ969T7 300 aa20.24■□□□□ 0.83
HOXC4-201ENST00000303406 SLC2A13Q96QE2 648 aa20.24■□□□□ 0.83
HOXC4-201ENST00000303406 TSEN34Q9BSV6 310 aaKnown RBP20.24■□□□□ 0.83
HOXC4-201ENST00000303406 LRRC4Q9HBW1 653 aa20.24■□□□□ 0.83
HOXC4-201ENST00000303406 GPBP1L1Q9HC44 474 aaPredicted RBP20.24■□□□□ 0.83
HOXC4-201ENST00000303406 SAE1Q9UBE0 346 aaPredicted RBP20.24■□□□□ 0.83
HOXC4-201ENST00000303406 A0A087WUV0 522 aaPredicted RBP20.23■□□□□ 0.83
HOXC4-201ENST00000303406 ARHGEF37A1IGU5 675 aa20.23■□□□□ 0.83
HOXC4-201ENST00000303406 BCLAF3A2AJT9 711 aaKnown RBP20.23■□□□□ 0.83
HOXC4-201ENST00000303406 DCDC2CA8MYV0 355 aa20.23■□□□□ 0.83
HOXC4-201ENST00000303406 GNRH1P01148 92 aa20.23■□□□□ 0.83
HOXC4-201ENST00000303406 CYP11A1P05108 521 aa20.23■□□□□ 0.83
HOXC4-201ENST00000303406 PCSK1P29120 753 aa20.23■□□□□ 0.83
HOXC4-201ENST00000303406 L1CAMP32004 1257 aa20.23■□□□□ 0.83
HOXC4-201ENST00000303406 NOS2P35228 1153 aa20.23■□□□□ 0.83
HOXC4-201ENST00000303406 CTCFP49711 727 aaPredicted RBP20.23■□□□□ 0.83
HOXC4-201ENST00000303406 GDF10P55107 478 aa20.23■□□□□ 0.83
HOXC4-201ENST00000303406 CAP1Q01518 475 aa20.23■□□□□ 0.83
HOXC4-201ENST00000303406 XRCC4Q13426 336 aa20.23■□□□□ 0.83
HOXC4-201ENST00000303406 ZC3H12AQ5D1E8 599 aaKnown RBP20.23■□□□□ 0.83
HOXC4-201ENST00000303406 MDH1BQ5I0G3 518 aa20.23■□□□□ 0.83
HOXC4-201ENST00000303406 C4orf22Q6V702 233 aa20.23■□□□□ 0.83
HOXC4-201ENST00000303406 UNC45BQ8IWX7 931 aa20.23■□□□□ 0.83
HOXC4-201ENST00000303406 PCDH19Q8TAB3 1148 aa20.23■□□□□ 0.83
HOXC4-201ENST00000303406 CPT1BQ92523 772 aa20.23■□□□□ 0.83
HOXC4-201ENST00000303406 SAYSD1Q9NPB0 183 aa20.23■□□□□ 0.83
HOXC4-201ENST00000303406 CRTAC1Q9NQ79 661 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms