RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 ZC3H7BQ9UGR2 993 aaKnown RBP13.77□□□□□ -0.2
SLC28A1-201ENST00000286749 PLLPQ9Y342 182 aa13.77□□□□□ -0.2
SLC28A1-201ENST00000286749 KCNN4O15554 427 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 UGT1A9O60656 530 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 KRT37O76014 449 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 MICAL2O94851 1124 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 NPTXRO95502 500 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 SNRPAP09012 282 aaKnown RBP13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 STAT5BP51692 787 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 MRPS5P82675 430 aaKnown RBP13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 LAMTOR4Q0VGL1 99 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 ZNF667Q5HYK9 610 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 LRRC71Q8N4P6 559 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 SLC4A11Q8NBS3 891 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 MCRS1Q96EZ8 462 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 ACAP3Q96P50 834 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 ASCC2Q9H1I8 757 aaPredicted RBP13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 SMYD3Q9H7B4 428 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 UGT1A7Q9HAW7 530 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 UGT1A10Q9HAW8 530 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 UGT1A8Q9HAW9 530 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 POPDC2Q9HBU9 364 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 ASNSD1Q9NWL6 643 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 KCNK4Q9NYG8 393 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 MARCOQ9UEW3 520 aaPredicted RBP13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 CAPN14A8MX76 684 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 M0QYV0 167 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 CYB561D2O14569 222 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 MAP3K6O95382 1288 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 KITP10721 976 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 PTPRAP18433 802 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 ERFP50548 548 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 AP1B1Q10567 949 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 CHI3L2Q15782 390 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 C15orf59Q2T9L4 293 aaPredicted RBP13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 THEMIS2Q5TEJ8 643 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 ANGEL2Q5VTE6 544 aaKnown RBP13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 FAM91A1Q658Y4 838 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 CYP4V2Q6ZWL3 525 aaPredicted RBP13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 DPH6Q7L8W6 267 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 ARHGAP24Q8N264 748 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 CCDC110Q8TBZ0 833 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 LRRN4Q8WUT4 740 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 E2F7Q96AV8 911 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 PLAC1Q9HBJ0 212 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 USP29Q9HBJ7 922 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 AS3MTQ9HBK9 375 aa13.77□□□□□ -0.21
SLC28A1-201ENST00000286749 SMIM24O75264 130 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 FARP2O94887 1054 aaPredicted RBP13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 SATB1Q01826 763 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 PTPN11Q06124 597 aaPredicted RBP13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 CDO1Q16878 200 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 TRNP1Q6NT89 227 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 ZBTB8OSQ8IWT0 167 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 KBTBD2Q8IY47 623 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 TMEM192Q8IY95 271 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 PPFIBP2Q8ND30 876 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 RBM15BQ8NDT2 890 aaKnown RBP13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 SMC1BQ8NDV3 1235 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 TEKT4Q8WW24 435 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 C7orf26Q96N11 449 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 TSC22D3Q99576 134 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 BCO2Q9BYV7 579 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 ELOVL4Q9GZR5 314 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 PICK1Q9NRD5 415 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 SMYD2Q9NRG4 433 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 PAK5Q9P286 719 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 SIX4Q9UIU6 781 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 AFG3L2Q9Y4W6 797 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 A8MXQ7 604 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 B4GALT5O43286 388 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 MAP3K7O43318 606 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 RFPL1O75677 317 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 ENDOD1O94919 500 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 CXCL8P10145 99 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 OSBPP22059 807 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 RAP1GDS1P52306 607 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 ZNF143P52747 638 aaPredicted RBP13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 KDSRQ06136 332 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 TFDP2Q14188 446 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 ZRSR2Q15696 482 aaKnown RBP13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 TMEM132AQ24JP5 1023 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 ATG16L1Q676U5 607 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 CAND1Q86VP6 1230 aaKnown RBP13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 UBA3Q8TBC4 463 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 CLPTM1LQ96KA5 538 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 WRNIP1Q96S55 665 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 TRIM56Q9BRZ2 755 aaKnown RBP13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 VCXQ9H320 206 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 KRT82Q9NSB4 513 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 ZNF212Q9UDV6 495 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 HEY1Q9Y5J3 304 aa13.76□□□□□ -0.21
SLC28A1-201ENST00000286749 LOC285556D6RIA3 1793 aa13.75□□□□□ -0.21
SLC28A1-201ENST00000286749 SRCAPQ6ZRS2 3230 aa13.75□□□□□ -0.21
SLC28A1-201ENST00000286749 B4GALT4O60513 344 aa13.75□□□□□ -0.21
SLC28A1-201ENST00000286749 PEX10O60683 326 aa13.75□□□□□ -0.21
SLC28A1-201ENST00000286749 GRAP2O75791 330 aa13.75□□□□□ -0.21
SLC28A1-201ENST00000286749 APRTP07741 180 aa13.75□□□□□ -0.21
SLC28A1-201ENST00000286749 CSH1P0DML2 217 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms