RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 NAMPTP43490 491 aa18.69■□□□□ 0.58
TRAF4-201ENST00000262395 YWHAZP63104 245 aaKnown RBP18.69■□□□□ 0.58
TRAF4-201ENST00000262395 TTC39BQ5VTQ0 682 aaPredicted RBP18.69■□□□□ 0.58
TRAF4-201ENST00000262395 TRMT10BQ6PF06 316 aaKnown RBP18.69■□□□□ 0.58
TRAF4-201ENST00000262395 TMPRSS6Q8IU80 811 aa18.69■□□□□ 0.58
TRAF4-201ENST00000262395 GSTCDQ8NEC7 633 aa18.69■□□□□ 0.58
TRAF4-201ENST00000262395 GBP5Q96PP8 586 aa18.69■□□□□ 0.58
TRAF4-201ENST00000262395 TTLL3Q9Y4R7 772 aa18.69■□□□□ 0.58
TRAF4-201ENST00000262395 MAGEA13PA6NCF6 341 aa18.68■□□□□ 0.58
TRAF4-201ENST00000262395 CAPN14A8MX76 684 aa18.68■□□□□ 0.58
TRAF4-201ENST00000262395 DKC1O60832 514 aaKnown RBP eCLIP18.68■□□□□ 0.58
TRAF4-201ENST00000262395 LYPLA1O75608 230 aaPredicted RBP18.68■□□□□ 0.58
TRAF4-201ENST00000262395 SLC25A3Q00325 362 aa18.68■□□□□ 0.58
TRAF4-201ENST00000262395 STYK1Q6J9G0 422 aa18.68■□□□□ 0.58
TRAF4-201ENST00000262395 GALNT15Q8N3T1 639 aa18.68■□□□□ 0.58
TRAF4-201ENST00000262395 UBA3Q8TBC4 463 aa18.68■□□□□ 0.58
TRAF4-201ENST00000262395 NSUN6Q8TEA1 469 aaKnown RBP18.68■□□□□ 0.58
TRAF4-201ENST00000262395 PYDC1Q8WXC3 89 aa18.68■□□□□ 0.58
TRAF4-201ENST00000262395 LPAR1Q92633 364 aa18.68■□□□□ 0.58
TRAF4-201ENST00000262395 IFT43Q96FT9 208 aa18.68■□□□□ 0.58
TRAF4-201ENST00000262395 GMLQ99445 158 aa18.68■□□□□ 0.58
TRAF4-201ENST00000262395 APOL6Q9BWW8 343 aa18.68■□□□□ 0.58
TRAF4-201ENST00000262395 SLC17A6Q9P2U8 582 aa18.68■□□□□ 0.58
TRAF4-201ENST00000262395 PLLPQ9Y342 182 aa18.68■□□□□ 0.58
TRAF4-201ENST00000262395 ARHGAP42A6NI28 874 aa18.68■□□□□ 0.58
TRAF4-201ENST00000262395 SPECC1L-ADORA2AF8WAN1 911 aa18.68■□□□□ 0.58
TRAF4-201ENST00000262395 CIB2O75838 187 aa18.68■□□□□ 0.58
TRAF4-201ENST00000262395 OATP04181 439 aa18.68■□□□□ 0.58
TRAF4-201ENST00000262395 CSH1P0DML2 217 aa18.68■□□□□ 0.58
TRAF4-201ENST00000262395 CSH2P0DML3 217 aa18.68■□□□□ 0.58
TRAF4-201ENST00000262395 RXRBP28702 533 aa18.68■□□□□ 0.58
TRAF4-201ENST00000262395 TAP1Q03518 808 aa18.68■□□□□ 0.58
TRAF4-201ENST00000262395 C16orf46Q6P387 395 aa18.68■□□□□ 0.58
TRAF4-201ENST00000262395 SCYL2Q6P3W7 929 aa18.68■□□□□ 0.58
TRAF4-201ENST00000262395 NDUFAF2Q8N183 169 aa18.68■□□□□ 0.58
TRAF4-201ENST00000262395 ARHGAP24Q8N264 748 aa18.68■□□□□ 0.58
TRAF4-201ENST00000262395 WNT10BO00744 389 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 NDC80O14777 642 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 TOM1L1O75674 476 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 RNF8O76064 485 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 EGFRP00533 1210 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 C6orf222P0C671 652 aaPredicted RBP18.67■□□□□ 0.58
TRAF4-201ENST00000262395 ASPAP45381 313 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 RPS6KA3P51812 740 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 ROR2Q01974 943 aaKnown RBP18.67■□□□□ 0.58
TRAF4-201ENST00000262395 KCNJ11Q14654 390 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 PPP1R2P3Q6NXS1 205 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 ISLR2Q6UXK2 745 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 XYLT1Q86Y38 959 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 BRSK2Q8IWQ3 736 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 UNC5BQ8IZJ1 945 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 PIWIL1Q96J94 861 aaKnown RBP18.67■□□□□ 0.58
TRAF4-201ENST00000262395 TWNKQ96RR1 684 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 NR2E3Q9Y5X4 410 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 ARID2Q68CP9 1835 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 E2F8A0AVK6 867 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 LYNP07948 512 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 SNRPAP09012 282 aaKnown RBP18.67■□□□□ 0.58
TRAF4-201ENST00000262395 ARL2P36404 184 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 ENPEPQ07075 957 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 DUOXA2Q1HG44 320 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 FAM102AQ5T9C2 384 aaPredicted RBP18.67■□□□□ 0.58
TRAF4-201ENST00000262395 RAPH1Q70E73 1250 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 MPP5Q8N3R9 675 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 PRPF31Q8WWY3 499 aaKnown RBP18.67■□□□□ 0.58
TRAF4-201ENST00000262395 AKT1S1Q96B36 256 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 MTBPQ96DY7 904 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 MMADHCQ9H3L0 296 aaPredicted RBP18.67■□□□□ 0.58
TRAF4-201ENST00000262395 DHX33Q9H6R0 707 aaKnown RBP18.67■□□□□ 0.58
TRAF4-201ENST00000262395 PLAC1Q9HBJ0 212 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 PIH1D1Q9NWS0 290 aaKnown RBP18.67■□□□□ 0.58
TRAF4-201ENST00000262395 NDE1Q9NXR1 346 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 ANGPTL2Q9UKU9 493 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 RFPL1O75677 317 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 KRT37O76014 449 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 TRUB2O95900 331 aaKnown RBP18.67■□□□□ 0.58
TRAF4-201ENST00000262395 RBL1P28749 1068 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 POLR2BP30876 1174 aaKnown RBP18.67■□□□□ 0.58
TRAF4-201ENST00000262395 EPHB1P54762 984 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 PEX6Q13608 980 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.67■□□□□ 0.58
TRAF4-201ENST00000262395 CCDC124Q96CT7 223 aaKnown RBP18.67■□□□□ 0.58
TRAF4-201ENST00000262395 KCNK4Q9NYG8 393 aa18.67■□□□□ 0.58
TRAF4-201ENST00000262395 ATG7O95352 703 aa18.66■□□□□ 0.58
TRAF4-201ENST00000262395 GJB1P08034 283 aa18.66■□□□□ 0.58
TRAF4-201ENST00000262395 ETS2P15036 469 aa18.66■□□□□ 0.58
TRAF4-201ENST00000262395 GMPRP36959 345 aa18.66■□□□□ 0.58
TRAF4-201ENST00000262395 YWHAEP62258 255 aaKnown RBP18.66■□□□□ 0.58
TRAF4-201ENST00000262395 RALGPS1Q5JS13 557 aa18.66■□□□□ 0.58
TRAF4-201ENST00000262395 CFAP157Q5JU67 520 aa18.66■□□□□ 0.58
TRAF4-201ENST00000262395 RASIP1Q5U651 963 aa18.66■□□□□ 0.58
TRAF4-201ENST00000262395 WDR49Q8IV35 697 aa18.66■□□□□ 0.58
TRAF4-201ENST00000262395 LRRC71Q8N4P6 559 aa18.66■□□□□ 0.58
TRAF4-201ENST00000262395 ZNF518BQ9C0D4 1074 aa18.66■□□□□ 0.58
TRAF4-201ENST00000262395 PGAP2Q9UHJ9 254 aa18.66■□□□□ 0.58
TRAF4-201ENST00000262395 TAGLN3Q9UI15 199 aa18.66■□□□□ 0.58
TRAF4-201ENST00000262395 PLA2G4CQ9UP65 541 aa18.66■□□□□ 0.58
TRAF4-201ENST00000262395 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.66■□□□□ 0.58
TRAF4-201ENST00000262395 PDE5AO76074 875 aa18.66■□□□□ 0.58
TRAF4-201ENST00000262395 RAP1GDS1P52306 607 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms