RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 LRRC74BQ6ZQY2 392 aa20.14■□□□□ 0.81
SCARB1-201ENST00000261693 PAXIP1Q6ZW49 1069 aaPredicted RBP20.14■□□□□ 0.81
SCARB1-201ENST00000261693 TREML1Q86YW5 311 aa20.14■□□□□ 0.81
SCARB1-201ENST00000261693 ARID3BQ8IVW6 561 aaPredicted RBP20.14■□□□□ 0.81
SCARB1-201ENST00000261693 SLC4A11Q8NBS3 891 aa20.14■□□□□ 0.81
SCARB1-201ENST00000261693 ZNF483Q8TF39 744 aaPredicted RBP20.14■□□□□ 0.81
SCARB1-201ENST00000261693 PIWIL1Q96J94 861 aaKnown RBP20.14■□□□□ 0.81
SCARB1-201ENST00000261693 ZC3H7BQ9UGR2 993 aaKnown RBP20.14■□□□□ 0.81
SCARB1-201ENST00000261693 SMAPO00193 183 aa20.13■□□□□ 0.81
SCARB1-201ENST00000261693 TSHRP16473 764 aa20.13■□□□□ 0.81
SCARB1-201ENST00000261693 STIP1P31948 543 aaKnown RBP20.13■□□□□ 0.81
SCARB1-201ENST00000261693 BST1Q10588 318 aa20.13■□□□□ 0.81
SCARB1-201ENST00000261693 ZNF667Q5HYK9 610 aa20.13■□□□□ 0.81
SCARB1-201ENST00000261693 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.13■□□□□ 0.81
SCARB1-201ENST00000261693 FAM161BQ96MY7 647 aa20.13■□□□□ 0.81
SCARB1-201ENST00000261693 ACAP3Q96P50 834 aa20.13■□□□□ 0.81
SCARB1-201ENST00000261693 GPATCH2LQ9NWQ4 482 aa20.13■□□□□ 0.81
SCARB1-201ENST00000261693 PPARGC1AQ9UBK2 798 aaKnown RBP20.13■□□□□ 0.81
SCARB1-201ENST00000261693 I3L4J1 428 aa20.13■□□□□ 0.81
SCARB1-201ENST00000261693 APRTP07741 180 aa20.13■□□□□ 0.81
SCARB1-201ENST00000261693 MRPS5P82675 430 aaKnown RBP20.13■□□□□ 0.81
SCARB1-201ENST00000261693 KDSRQ06136 332 aa20.13■□□□□ 0.81
SCARB1-201ENST00000261693 CMPK2Q5EBM0 449 aa20.13■□□□□ 0.81
SCARB1-201ENST00000261693 EEF1DP3Q658K8 133 aa20.13■□□□□ 0.81
SCARB1-201ENST00000261693 TRNP1Q6NT89 227 aa20.13■□□□□ 0.81
SCARB1-201ENST00000261693 FAM136AQ96C01 138 aa20.13■□□□□ 0.81
SCARB1-201ENST00000261693 NLRP4Q96MN2 994 aa20.13■□□□□ 0.81
SCARB1-201ENST00000261693 ELOVL4Q9GZR5 314 aa20.13■□□□□ 0.81
SCARB1-201ENST00000261693 SIX4Q9UIU6 781 aa20.13■□□□□ 0.81
SCARB1-201ENST00000261693 PPP1R12AO14974 1030 aaPredicted RBP20.12■□□□□ 0.81
SCARB1-201ENST00000261693 CHRM1P11229 460 aaPredicted RBP20.12■□□□□ 0.81
SCARB1-201ENST00000261693 KCNA3P22001 575 aa20.12■□□□□ 0.81
SCARB1-201ENST00000261693 CHI3L2Q15782 390 aa20.12■□□□□ 0.81
SCARB1-201ENST00000261693 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.12■□□□□ 0.818e-8■□□□□ 9.4
SCARB1-201ENST00000261693 CLPTM1LQ96KA5 538 aa20.12■□□□□ 0.81
SCARB1-201ENST00000261693 USP29Q9HBJ7 922 aa20.12■□□□□ 0.81
SCARB1-201ENST00000261693 AS3MTQ9HBK9 375 aa20.12■□□□□ 0.81
SCARB1-201ENST00000261693 SMYD2Q9NRG4 433 aa20.12■□□□□ 0.81
SCARB1-201ENST00000261693 ASNSD1Q9NWL6 643 aa20.12■□□□□ 0.81
SCARB1-201ENST00000261693 WDR35Q9P2L0 1181 aa20.12■□□□□ 0.81
SCARB1-201ENST00000261693 INO80B-WBP1J3KQ70 363 aa20.12■□□□□ 0.81
SCARB1-201ENST00000261693 C1QAP02745 245 aa20.12■□□□□ 0.81
SCARB1-201ENST00000261693 NFICP08651 508 aa20.12■□□□□ 0.81
SCARB1-201ENST00000261693 ICAM3P32942 547 aa20.12■□□□□ 0.81
SCARB1-201ENST00000261693 IRX1P78414 480 aaPredicted RBP20.12■□□□□ 0.81
SCARB1-201ENST00000261693 PTPN11Q06124 597 aaPredicted RBP20.12■□□□□ 0.81
SCARB1-201ENST00000261693 SCYL2Q6P3W7 929 aa20.12■□□□□ 0.81
SCARB1-201ENST00000261693 CATSPERGQ6ZRH7 1159 aa20.12■□□□□ 0.81
SCARB1-201ENST00000261693 CYP4V2Q6ZWL3 525 aaPredicted RBP20.12■□□□□ 0.81
SCARB1-201ENST00000261693 ZBTB8OSQ8IWT0 167 aa20.12■□□□□ 0.81
SCARB1-201ENST00000261693 INO80BQ9C086 356 aaPredicted RBP20.12■□□□□ 0.81
SCARB1-201ENST00000261693 PLAC1Q9HBJ0 212 aa20.12■□□□□ 0.81
SCARB1-201ENST00000261693 PLLPQ9Y342 182 aa20.12■□□□□ 0.81
SCARB1-201ENST00000261693 ANK1P16157 1881 aa20.12■□□□□ 0.81
SCARB1-201ENST00000261693 KRT37O76014 449 aa20.11■□□□□ 0.81
SCARB1-201ENST00000261693 TOP3BO95985 862 aaKnown RBP20.11■□□□□ 0.81
SCARB1-201ENST00000261693 RBL1P28749 1068 aa20.11■□□□□ 0.81
SCARB1-201ENST00000261693 KRT81Q14533 505 aa20.11■□□□□ 0.81
SCARB1-201ENST00000261693 LY6KQ17RY6 165 aa20.11■□□□□ 0.81
SCARB1-201ENST00000261693 THEMIS2Q5TEJ8 643 aa20.11■□□□□ 0.81
SCARB1-201ENST00000261693 CCDC33Q8N5R6 958 aa20.11■□□□□ 0.81
SCARB1-201ENST00000261693 TRAPPC12Q8WVT3 735 aa20.11■□□□□ 0.81
SCARB1-201ENST00000261693 E2F7Q96AV8 911 aa20.11■□□□□ 0.81
SCARB1-201ENST00000261693 HEXIM2Q96MH2 286 aaKnown RBP20.11■□□□□ 0.81
SCARB1-201ENST00000261693 SPDYE16A6NNV3 312 aaPredicted RBP20.11■□□□□ 0.81
SCARB1-201ENST00000261693 CHADO15335 359 aa20.11■□□□□ 0.81
SCARB1-201ENST00000261693 SNRPAP09012 282 aaKnown RBP20.11■□□□□ 0.81
SCARB1-201ENST00000261693 PDGFRAP16234 1089 aa20.11■□□□□ 0.81
SCARB1-201ENST00000261693 IRX4P78413 519 aa20.11■□□□□ 0.81
SCARB1-201ENST00000261693 SURF1Q15526 300 aa20.11■□□□□ 0.81
SCARB1-201ENST00000261693 ATF7IP2Q5U623 682 aa20.11■□□□□ 0.81
SCARB1-201ENST00000261693 MPZL3Q6UWV2 235 aa20.11■□□□□ 0.81
SCARB1-201ENST00000261693 CAND1Q86VP6 1230 aaKnown RBP20.11■□□□□ 0.81
SCARB1-201ENST00000261693 C1orf127Q8N9H9 656 aa20.11■□□□□ 0.81
SCARB1-201ENST00000261693 SPDYE1Q8NFV5 336 aaPredicted RBP20.11■□□□□ 0.81
SCARB1-201ENST00000261693 RXFP2Q8WXD0 754 aa20.11■□□□□ 0.81
SCARB1-201ENST00000261693 MCRS1Q96EZ8 462 aa20.11■□□□□ 0.81
SCARB1-201ENST00000261693 POPDC2Q9HBU9 364 aa20.11■□□□□ 0.81
SCARB1-201ENST00000261693 PCMTD2Q9NV79 361 aa20.11■□□□□ 0.81
SCARB1-201ENST00000261693 DOCK1Q14185 1865 aa20.1■□□□□ 0.81
SCARB1-201ENST00000261693 CSDE1O75534 798 aaKnown RBP20.1■□□□□ 0.81
SCARB1-201ENST00000261693 HMGCRP04035 888 aa20.1■□□□□ 0.81
SCARB1-201ENST00000261693 ITGB3P05106 788 aa20.1■□□□□ 0.81
SCARB1-201ENST00000261693 SP100P23497 879 aaPredicted RBP20.1■□□□□ 0.81
SCARB1-201ENST00000261693 ZNF143P52747 638 aaPredicted RBP20.1■□□□□ 0.81
SCARB1-201ENST00000261693 ALDH18A1P54886 795 aaKnown RBP20.1■□□□□ 0.81
SCARB1-201ENST00000261693 AQP5P55064 265 aa20.1■□□□□ 0.81
SCARB1-201ENST00000261693 MROH9Q5TGP6 573 aa20.1■□□□□ 0.81
SCARB1-201ENST00000261693 FAM160B1Q5W0V3 765 aa20.1■□□□□ 0.81
SCARB1-201ENST00000261693 ZCCHC23Q6ZST2 131 aa20.1■□□□□ 0.81
SCARB1-201ENST00000261693 RBM15BQ8NDT2 890 aaKnown RBP20.1■□□□□ 0.81
SCARB1-201ENST00000261693 CCDC110Q8TBZ0 833 aa20.1■□□□□ 0.81
SCARB1-201ENST00000261693 PPP1R12CQ9BZL4 782 aa20.1■□□□□ 0.81
SCARB1-201ENST00000261693 C20orf27Q9GZN8 174 aa20.1■□□□□ 0.81
SCARB1-201ENST00000261693 STX18Q9P2W9 335 aaKnown RBP20.1■□□□□ 0.81
SCARB1-201ENST00000261693 LRCH1Q9Y2L9 728 aa20.1■□□□□ 0.81
SCARB1-201ENST00000261693 TRIP11Q15643 1979 aa20.1■□□□□ 0.81
SCARB1-201ENST00000261693 SMIM24O75264 130 aa20.1■□□□□ 0.81
SCARB1-201ENST00000261693 RFPL1O75677 317 aa20.1■□□□□ 0.81
SCARB1-201ENST00000261693 OSBPP22059 807 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms