RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 DPYSL3Q14195 570 aa17.59■□□□□ 0.41
GAPDH-201ENST00000229239 HIF1AQ16665 826 aa17.59■□□□□ 0.41
GAPDH-201ENST00000229239 C6orf89Q6UWU4 347 aa17.59■□□□□ 0.41
GAPDH-201ENST00000229239 PPP1R21Q6ZMI0 780 aa17.59■□□□□ 0.41
GAPDH-201ENST00000229239 NAT8LQ8N9F0 302 aa17.59■□□□□ 0.41
GAPDH-201ENST00000229239 RNF157Q96PX1 679 aa17.59■□□□□ 0.41
GAPDH-201ENST00000229239 SNX25Q9H3E2 840 aa17.59■□□□□ 0.41
GAPDH-201ENST00000229239 DDX20Q9UHI6 824 aaKnown RBP17.59■□□□□ 0.41
GAPDH-201ENST00000229239 SLC24A2Q9UI40 661 aa17.59■□□□□ 0.41
GAPDH-201ENST00000229239 HES2Q9Y543 173 aa17.59■□□□□ 0.41
GAPDH-201ENST00000229239 TREHO43280 583 aa17.58■□□□□ 0.41
GAPDH-201ENST00000229239 RPLP2P05387 115 aaKnown RBP17.58■□□□□ 0.41
GAPDH-201ENST00000229239 RBP3P10745 1247 aa17.58■□□□□ 0.41
GAPDH-201ENST00000229239 RPL22P35268 128 aaKnown RBP17.58■□□□□ 0.41
GAPDH-201ENST00000229239 GNL1P36915 607 aaPredicted RBP17.58■□□□□ 0.41
GAPDH-201ENST00000229239 PDE4CQ08493 712 aa17.58■□□□□ 0.41
GAPDH-201ENST00000229239 HIC1Q14526 733 aa17.58■□□□□ 0.41
GAPDH-201ENST00000229239 KRT81Q14533 505 aa17.58■□□□□ 0.41
GAPDH-201ENST00000229239 ARHGEF18Q6ZSZ5 1173 aa17.58■□□□□ 0.41
GAPDH-201ENST00000229239 SLC26A9Q7LBE3 791 aa17.58■□□□□ 0.41
GAPDH-201ENST00000229239 NECAB2Q7Z6G3 386 aa17.58■□□□□ 0.41
GAPDH-201ENST00000229239 TOP6BLQ8N6T0 577 aa17.58■□□□□ 0.41
GAPDH-201ENST00000229239 APPL2Q8NEU8 664 aa17.58■□□□□ 0.41
GAPDH-201ENST00000229239 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.58■□□□□ 0.41
GAPDH-201ENST00000229239 CABS1Q96KC9 395 aa17.58■□□□□ 0.41
GAPDH-201ENST00000229239 TNIP3Q96KP6 325 aa17.58■□□□□ 0.41
GAPDH-201ENST00000229239 HSFY1Q96LI6 401 aa17.58■□□□□ 0.41
GAPDH-201ENST00000229239 HTATIP2Q9BUP3 242 aa17.58■□□□□ 0.41
GAPDH-201ENST00000229239 CXCL16Q9H2A7 254 aa17.58■□□□□ 0.41
GAPDH-201ENST00000229239 NAALADL1Q9UQQ1 740 aa17.58■□□□□ 0.41
GAPDH-201ENST00000229239 E7ESA3 106 aa17.58■□□□□ 0.4
GAPDH-201ENST00000229239 PAPSS1O43252 624 aaPredicted RBP17.58■□□□□ 0.4
GAPDH-201ENST00000229239 RGS7P49802 495 aa17.58■□□□□ 0.4
GAPDH-201ENST00000229239 ROR1Q01973 937 aa17.58■□□□□ 0.4
GAPDH-201ENST00000229239 GLRA4Q5JXX5 417 aa17.58■□□□□ 0.4
GAPDH-201ENST00000229239 TAX1BP1Q86VP1 789 aa17.58■□□□□ 0.4
GAPDH-201ENST00000229239 C7orf31Q8N865 590 aa17.58■□□□□ 0.4
GAPDH-201ENST00000229239 SPATA18Q8TC71 538 aa17.58■□□□□ 0.4
GAPDH-201ENST00000229239 DIS3LQ8TF46 1054 aaKnown RBP17.58■□□□□ 0.4
GAPDH-201ENST00000229239 KBTBD7Q8WVZ9 684 aa17.58■□□□□ 0.4
GAPDH-201ENST00000229239 TMEM40Q8WWA1 233 aa17.58■□□□□ 0.4
GAPDH-201ENST00000229239 CPT1BQ92523 772 aa17.58■□□□□ 0.4
GAPDH-201ENST00000229239 DPF3Q92784 378 aa17.58■□□□□ 0.4
GAPDH-201ENST00000229239 KHSRPQ92945 711 aaKnown RBP eCLIP17.58■□□□□ 0.4
GAPDH-201ENST00000229239 SEC16BQ96JE7 1060 aa17.58■□□□□ 0.4
GAPDH-201ENST00000229239 ZNF670Q9BS34 389 aa17.58■□□□□ 0.4
GAPDH-201ENST00000229239 FAM49BQ9NUQ9 324 aa17.58■□□□□ 0.4
GAPDH-201ENST00000229239 NME7Q9Y5B8 376 aa17.58■□□□□ 0.4
GAPDH-201ENST00000229239 PDCD11Q14690 1871 aaKnown RBP17.58■□□□□ 0.4
GAPDH-201ENST00000229239 EXOC1LA0A1B0GW35 172 aa17.57■□□□□ 0.4
GAPDH-201ENST00000229239 TMEM120BA0PK00 339 aa17.57■□□□□ 0.4
GAPDH-201ENST00000229239 SEPT4O43236 478 aa17.57■□□□□ 0.4
GAPDH-201ENST00000229239 ATP2A2P16615 1042 aaKnown RBP17.57■□□□□ 0.4
GAPDH-201ENST00000229239 ZFXP17010 805 aaPredicted RBP17.57■□□□□ 0.4
GAPDH-201ENST00000229239 AKAP5P24588 427 aa17.57■□□□□ 0.4
GAPDH-201ENST00000229239 LRPAP1P30533 357 aa17.57■□□□□ 0.4
GAPDH-201ENST00000229239 MNX1P50219 401 aaPredicted RBP17.57■□□□□ 0.4
GAPDH-201ENST00000229239 TAF5Q15542 800 aa17.57■□□□□ 0.4
GAPDH-201ENST00000229239 FSCN1Q16658 493 aaKnown RBP17.57■□□□□ 0.4
GAPDH-201ENST00000229239 C15orf59Q2T9L4 293 aaPredicted RBP17.57■□□□□ 0.4
GAPDH-201ENST00000229239 VSTM1Q6UX27 236 aa17.57■□□□□ 0.4
GAPDH-201ENST00000229239 FAM172AQ8WUF8 416 aa17.57■□□□□ 0.4
GAPDH-201ENST00000229239 FAF2Q96CS3 445 aa17.57■□□□□ 0.4
GAPDH-201ENST00000229239 NKIRAS1Q9NYS0 192 aa17.57■□□□□ 0.4
GAPDH-201ENST00000229239 SAE1Q9UBE0 346 aaPredicted RBP17.57■□□□□ 0.4
GAPDH-201ENST00000229239 ALPK3Q96L96 1907 aa17.57■□□□□ 0.4
GAPDH-201ENST00000229239 GOLGA6L7A0A1B0GV03 622 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 APOL1O14791 398 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 AKR1A1P14550 325 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 WARSP23381 471 aaKnown RBP17.56■□□□□ 0.4
GAPDH-201ENST00000229239 GDF10P55107 478 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 PURAQ00577 322 aaKnown RBP17.56■□□□□ 0.4
GAPDH-201ENST00000229239 PDIA2Q13087 525 aaKnown RBP17.56■□□□□ 0.4
GAPDH-201ENST00000229239 ITIH4Q14624 930 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 ZBED8Q8IZ13 594 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 ATP11CQ8NB49 1132 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 DYDC1Q8WWB3 177 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 MAML1Q92585 1016 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 CENPIQ92674 756 aaPredicted RBP17.56■□□□□ 0.4
GAPDH-201ENST00000229239 RTP4Q96DX8 246 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 SGSM3Q96HU1 749 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 PIWIL1Q96J94 861 aaKnown RBP17.56■□□□□ 0.4
GAPDH-201ENST00000229239 PRMT1Q99873 361 aaKnown RBP17.56■□□□□ 0.4
GAPDH-201ENST00000229239 C11orf84Q9BUA3 381 aaPredicted RBP17.56■□□□□ 0.4
GAPDH-201ENST00000229239 APOL6Q9BWW8 343 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 ACTR5Q9H9F9 607 aaPredicted RBP17.56■□□□□ 0.4
GAPDH-201ENST00000229239 SAMD15Q9P1V8 674 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 ZMYND8Q9ULU4 1186 aaPredicted RBP17.56■□□□□ 0.4
GAPDH-201ENST00000229239 IPPQ9Y573 584 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 FRMPD3Q5JV73 1810 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 HUS1O60921 280 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 CPP00450 1065 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 BRAFP15056 766 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 SLC8A3P57103 927 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 CCDC38Q502W7 563 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 ZC3H12AQ5D1E8 599 aaKnown RBP17.56■□□□□ 0.4
GAPDH-201ENST00000229239 SH3PXD2AQ5TCZ1 1133 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 SLC9A4Q6AI14 798 aa17.56■□□□□ 0.4
GAPDH-201ENST00000229239 DARS2Q6PI48 645 aaKnown RBP17.56■□□□□ 0.4
GAPDH-201ENST00000229239 UNC45BQ8IWX7 931 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms