RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 RNF8O76064 485 aa25.99■■□□□ 1.75
RUNDC3A-201ENST00000225441 P4HA1P13674 534 aa25.99■■□□□ 1.75
RUNDC3A-201ENST00000225441 MSH2P43246 934 aa25.99■■□□□ 1.75
RUNDC3A-201ENST00000225441 ACLYP53396 1101 aa25.99■■□□□ 1.75
RUNDC3A-201ENST00000225441 KIZQ2M2Z5 673 aa25.99■■□□□ 1.75
RUNDC3A-201ENST00000225441 ZNF394Q53GI3 561 aa25.99■■□□□ 1.75
RUNDC3A-201ENST00000225441 SESTD1Q86VW0 696 aa25.99■■□□□ 1.75
RUNDC3A-201ENST00000225441 XYLT1Q86Y38 959 aa25.99■■□□□ 1.75
RUNDC3A-201ENST00000225441 ANKRD27Q96NW4 1050 aa25.99■■□□□ 1.75
RUNDC3A-201ENST00000225441 LRRC37BQ96QE4 947 aa25.99■■□□□ 1.75
RUNDC3A-201ENST00000225441 LRMDAQ9H2I8 198 aa25.99■■□□□ 1.75
RUNDC3A-201ENST00000225441 ASNSD1Q9NWL6 643 aa25.99■■□□□ 1.75
RUNDC3A-201ENST00000225441 RPL26L1Q9UNX3 145 aaKnown RBP25.99■■□□□ 1.75
RUNDC3A-201ENST00000225441 CLUHO75153 1309 aa25.98■■□□□ 1.75
RUNDC3A-201ENST00000225441 B4GALT5O43286 388 aa25.98■■□□□ 1.75
RUNDC3A-201ENST00000225441 GPR32O75388 356 aa25.98■■□□□ 1.75
RUNDC3A-201ENST00000225441 CD19P15391 556 aa25.98■■□□□ 1.75
RUNDC3A-201ENST00000225441 RPL22P35268 128 aaKnown RBP25.98■■□□□ 1.75
RUNDC3A-201ENST00000225441 RAD23BP54727 409 aa25.98■■□□□ 1.75
RUNDC3A-201ENST00000225441 ATP11AP98196 1134 aa25.98■■□□□ 1.75
RUNDC3A-201ENST00000225441 RNASELQ05823 741 aaKnown RBP25.98■■□□□ 1.75
RUNDC3A-201ENST00000225441 TMEM62Q0P6H9 643 aa25.98■■□□□ 1.75
RUNDC3A-201ENST00000225441 SF3A3Q12874 501 aaKnown RBP eCLIP25.98■■□□□ 1.75
RUNDC3A-201ENST00000225441 AMHR2Q16671 573 aa25.98■■□□□ 1.75
RUNDC3A-201ENST00000225441 FAM47CQ5HY64 1035 aa25.98■■□□□ 1.75
RUNDC3A-201ENST00000225441 GDF6Q6KF10 455 aaPredicted RBP25.98■■□□□ 1.75
RUNDC3A-201ENST00000225441 TAF2Q6P1X5 1199 aa25.98■■□□□ 1.75
RUNDC3A-201ENST00000225441 ARFGAP1Q8N6T3 406 aa25.98■■□□□ 1.75
RUNDC3A-201ENST00000225441 SLC4A11Q8NBS3 891 aa25.98■■□□□ 1.75
RUNDC3A-201ENST00000225441 VPS11Q9H270 941 aa25.98■■□□□ 1.75
RUNDC3A-201ENST00000225441 KIAA1257Q9ULG3 409 aa25.98■■□□□ 1.75
RUNDC3A-201ENST00000225441 FRMPD3Q5JV73 1810 aa25.98■■□□□ 1.75
RUNDC3A-201ENST00000225441 CSDE1O75534 798 aaKnown RBP25.98■■□□□ 1.75
RUNDC3A-201ENST00000225441 RPA3P35244 121 aaPredicted RBP25.98■■□□□ 1.75
RUNDC3A-201ENST00000225441 TSEN34Q9BSV6 310 aaKnown RBP25.98■■□□□ 1.75
RUNDC3A-201ENST00000225441 NOP53Q9NZM5 478 aaKnown RBP25.98■■□□□ 1.75
RUNDC3A-201ENST00000225441 MOXD2PA6NHM9 499 aa25.97■■□□□ 1.75
RUNDC3A-201ENST00000225441 GOLGA8SH3BPF8 625 aa25.97■■□□□ 1.75
RUNDC3A-201ENST00000225441 MCF2LO15068 1137 aa25.97■■□□□ 1.75
RUNDC3A-201ENST00000225441 ENDOD1O94919 500 aa25.97■■□□□ 1.75
RUNDC3A-201ENST00000225441 PDE4CQ08493 712 aa25.97■■□□□ 1.75
RUNDC3A-201ENST00000225441 DNAJC3Q13217 504 aa25.97■■□□□ 1.75
RUNDC3A-201ENST00000225441 TFDP2Q14188 446 aa25.97■■□□□ 1.75
RUNDC3A-201ENST00000225441 SLC45A4Q5BKX6 768 aa25.97■■□□□ 1.75
RUNDC3A-201ENST00000225441 FYB2Q5VWT5 728 aa25.97■■□□□ 1.75
RUNDC3A-201ENST00000225441 NME8Q8N427 588 aa25.97■■□□□ 1.75
RUNDC3A-201ENST00000225441 KCTD6Q8NC69 237 aa25.97■■□□□ 1.75
RUNDC3A-201ENST00000225441 JOSD2Q8TAC2 188 aa25.97■■□□□ 1.75
RUNDC3A-201ENST00000225441 GCOM2Q9BZD3 368 aaPredicted RBP25.97■■□□□ 1.75
RUNDC3A-201ENST00000225441 UNC93B1Q9H1C4 597 aa25.97■■□□□ 1.75
RUNDC3A-201ENST00000225441 SYNCQ9H7C4 482 aa25.97■■□□□ 1.75
RUNDC3A-201ENST00000225441 CYLDQ9NQC7 956 aa25.97■■□□□ 1.75
RUNDC3A-201ENST00000225441 TRUB2O95900 331 aaKnown RBP25.96■■□□□ 1.75
RUNDC3A-201ENST00000225441 KRT16P08779 473 aa25.96■■□□□ 1.75
RUNDC3A-201ENST00000225441 VDRP11473 427 aa25.96■■□□□ 1.75
RUNDC3A-201ENST00000225441 IL1R2P27930 398 aa25.96■■□□□ 1.75
RUNDC3A-201ENST00000225441 PTPN11Q06124 597 aaPredicted RBP25.96■■□□□ 1.75
RUNDC3A-201ENST00000225441 SCARA3Q6AZY7 606 aa25.96■■□□□ 1.75
RUNDC3A-201ENST00000225441 C3orf62Q6ZUJ4 267 aa25.96■■□□□ 1.75
RUNDC3A-201ENST00000225441 FAM47EQ6ZV65 393 aa25.96■■□□□ 1.75
RUNDC3A-201ENST00000225441 VSIG1Q86XK7 387 aa25.96■■□□□ 1.75
RUNDC3A-201ENST00000225441 PALM2Q8IXS6 379 aa25.96■■□□□ 1.75
RUNDC3A-201ENST00000225441 HAUS1Q96CS2 278 aa25.96■■□□□ 1.75
RUNDC3A-201ENST00000225441 CYTH2Q99418 400 aa25.96■■□□□ 1.75
RUNDC3A-201ENST00000225441 TUBB6Q9BUF5 446 aa25.96■■□□□ 1.75
RUNDC3A-201ENST00000225441 ASB7Q9H672 318 aa25.96■■□□□ 1.75
RUNDC3A-201ENST00000225441 ZWILCHQ9H900 591 aa25.96■■□□□ 1.75
RUNDC3A-201ENST00000225441 GGT7Q9UJ14 662 aa25.96■■□□□ 1.75
RUNDC3A-201ENST00000225441 FAM155BO75949 473 aa25.95■■□□□ 1.75
RUNDC3A-201ENST00000225441 EIF3EP60228 445 aaKnown RBP25.95■■□□□ 1.75
RUNDC3A-201ENST00000225441 SEPT7Q16181 437 aaKnown RBP25.95■■□□□ 1.75
RUNDC3A-201ENST00000225441 TMEM132AQ24JP5 1023 aa25.95■■□□□ 1.75
RUNDC3A-201ENST00000225441 TLDC1Q6P9B6 456 aa25.95■■□□□ 1.75
RUNDC3A-201ENST00000225441 ZNF75CPQ92670 426 aaPredicted RBP25.95■■□□□ 1.75
RUNDC3A-201ENST00000225441 CDHR5Q9HBB8 845 aa25.95■■□□□ 1.75
RUNDC3A-201ENST00000225441 SAR1AQ9NR31 198 aa25.95■■□□□ 1.75
RUNDC3A-201ENST00000225441 GINS2Q9Y248 185 aa25.95■■□□□ 1.75
RUNDC3A-201ENST00000225441 TRIP12Q14669 1992 aaPredicted RBP25.95■■□□□ 1.74
RUNDC3A-201ENST00000225441 C2CD2LO14523 706 aa25.95■■□□□ 1.74
RUNDC3A-201ENST00000225441 TRAFD1O14545 582 aaPredicted RBP25.95■■□□□ 1.74
RUNDC3A-201ENST00000225441 MCF2P10911 925 aa25.95■■□□□ 1.74
RUNDC3A-201ENST00000225441 ELF1P32519 619 aa25.95■■□□□ 1.74
RUNDC3A-201ENST00000225441 SLC1A5Q15758 541 aa25.95■■□□□ 1.74
RUNDC3A-201ENST00000225441 SCARA5Q6ZMJ2 495 aa25.95■■□□□ 1.74
RUNDC3A-201ENST00000225441 RFX6Q8HWS3 928 aa25.95■■□□□ 1.74
RUNDC3A-201ENST00000225441 ANKLE1Q8NAG6 615 aa25.95■■□□□ 1.74
RUNDC3A-201ENST00000225441 ARRDC4Q8NCT1 418 aa25.95■■□□□ 1.74
RUNDC3A-201ENST00000225441 MZB1Q8WU39 189 aa25.95■■□□□ 1.74
RUNDC3A-201ENST00000225441 C10orf82Q8WW14 230 aa25.95■■□□□ 1.74
RUNDC3A-201ENST00000225441 APBB2Q92870 758 aa25.95■■□□□ 1.74
RUNDC3A-201ENST00000225441 TMEM176AQ96HP8 235 aa25.95■■□□□ 1.74
RUNDC3A-201ENST00000225441 PAFAH2Q99487 392 aa25.95■■□□□ 1.74
RUNDC3A-201ENST00000225441 OSMRQ99650 979 aa25.95■■□□□ 1.74
RUNDC3A-201ENST00000225441 MAK16Q9BXY0 300 aaKnown RBP25.95■■□□□ 1.74
RUNDC3A-201ENST00000225441 MYLK2Q9H1R3 596 aa25.95■■□□□ 1.74
RUNDC3A-201ENST00000225441 NXF1Q9UBU9 619 aaKnown RBP25.95■■□□□ 1.74
RUNDC3A-201ENST00000225441 CYTH4Q9UIA0 394 aa25.95■■□□□ 1.74
RUNDC3A-201ENST00000225441 ANK1P16157 1881 aa25.94■■□□□ 1.74
RUNDC3A-201ENST00000225441 IQANK1A0A1B0GTG1 560 aa25.94■■□□□ 1.74
RUNDC3A-201ENST00000225441 CILPO75339 1184 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms