RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 UTP15Q8TED0 518 aaKnown RBP11.41□□□□□ -0.58
USP31-201ENST00000219689 SH3TC2Q8TF17 1288 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 PTPRN2Q92932 1015 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 APEX2Q9UBZ4 518 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 M0QYV0 167 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 CDK16Q00536 496 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 OR8H1Q8NGG4 311 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 ACTRT1Q8TDG2 376 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 SEMA4DQ92854 862 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 PDCD10Q9BUL8 212 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 PFDN2Q9UHV9 154 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 NUDT5Q9UKK9 219 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 FAM92AA1XBS5 289 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 UCHL3P15374 230 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 RTP1P59025 263 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 UBE3CQ15386 1083 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 DGKDQ16760 1214 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 ABRAXAS1Q6UWZ7 409 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 NCCRP1Q6ZVX7 275 aaPredicted RBP11.41□□□□□ -0.58
USP31-201ENST00000219689 ZNF285Q96NJ3 590 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 PSEN1P49768 467 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 ATP2C1P98194 919 aaPredicted RBP11.41□□□□□ -0.58
USP31-201ENST00000219689 TAP1Q03518 808 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.41□□□□□ -0.58
USP31-201ENST00000219689 SLC9A4Q6AI14 798 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 SCARA3Q6AZY7 606 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 TYW3Q6IPR3 259 aaKnown RBP11.41□□□□□ -0.58
USP31-201ENST00000219689 CEP170P1Q96L14 293 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 OGDHLQ9ULD0 1010 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 C15orf38-AP3S2A0A0A6YYH1 394 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 INO80B-WBP1J3KQ70 363 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 MATN2O00339 956 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 NADKO95544 446 aaPredicted RBP11.41□□□□□ -0.58
USP31-201ENST00000219689 CYP19A1P11511 503 aaPredicted RBP11.41□□□□□ -0.58
USP31-201ENST00000219689 UBAP2LQ14157 1087 aaKnown RBP11.41□□□□□ -0.58
USP31-201ENST00000219689 RABL6Q3YEC7 729 aaPredicted RBP11.41□□□□□ -0.58
USP31-201ENST00000219689 ARPINQ7Z6K5 226 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 TTC30AQ86WT1 665 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 DHFR2Q86XF0 187 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 DQX1Q8TE96 717 aaKnown RBP11.41□□□□□ -0.58
USP31-201ENST00000219689 PAFAH2Q99487 392 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 NUDT12Q9BQG2 462 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 FAM213AQ9BRX8 229 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 INO80BQ9C086 356 aaPredicted RBP11.41□□□□□ -0.58
USP31-201ENST00000219689 AASDHPPTQ9NRN7 309 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 UBA2Q9UBT2 640 aaPredicted RBP11.41□□□□□ -0.58
USP31-201ENST00000219689 ALG6Q9Y672 507 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 FNTAP49354 379 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 EPS8Q12929 822 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 GALNT15Q8N3T1 639 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 WDR36Q8NI36 951 aaKnown RBP11.41□□□□□ -0.58
USP31-201ENST00000219689 PLEKHA5Q9HAU0 1116 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 K7ERI5 159 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 NPTXRO95502 500 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 TBC1D10CQ8IV04 446 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 BHMTQ93088 406 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 FLT1P17948 1338 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 SLC27A3Q5K4L6 730 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 ERMARDQ5T6L9 678 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 PPP1R16BQ96T49 567 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 AVENQ9NQS1 362 aaPredicted RBP11.41□□□□□ -0.58
USP31-201ENST00000219689 PNPLA3Q9NST1 481 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 CD274Q9NZQ7 290 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 TPRKBQ9Y3C4 175 aa11.41□□□□□ -0.58
USP31-201ENST00000219689 EPN2O95208 641 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 ASMTLO95671 621 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 ALFQ53S48 1182 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 AMIGO2Q86SJ2 522 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 CAMKK1Q8N5S9 505 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 XXYLT1Q8NBI6 393 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 TCP10LQ8TDR4 215 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 CLK4Q9HAZ1 481 aaKnown RBP11.4□□□□□ -0.58
USP31-201ENST00000219689 CEP152O94986 1710 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 CAMTA2O94983 1202 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 CENPAP49450 140 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 CENPCQ03188 943 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 HMBOX1Q6NT76 420 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 FBXO25Q8TCJ0 367 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 FIG4Q92562 907 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 ACSF2Q96CM8 615 aaPredicted RBP11.4□□□□□ -0.58
USP31-201ENST00000219689 CDRT15Q96T59 188 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 SMARCAD1Q9H4L7 1026 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 ATPIF1Q9UII2 106 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 ULK2Q8IYT8 1036 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 RNF139Q8WU17 664 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 KIAA1586Q9HCI6 787 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 ZNF407Q9C0G0 2248 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 POLR2EP19388 210 aaKnown RBP11.4□□□□□ -0.58
USP31-201ENST00000219689 SPRP35270 261 aaPredicted RBP11.4□□□□□ -0.58
USP31-201ENST00000219689 CYP4F2P78329 520 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 CYP4F3Q08477 520 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 FAM98BQ52LJ0 330 aaKnown RBP11.4□□□□□ -0.58
USP31-201ENST00000219689 PDCD4Q53EL6 469 aaKnown RBP11.4□□□□□ -0.58
USP31-201ENST00000219689 FAM160B1Q5W0V3 765 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 BPIFB6Q8NFQ5 453 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 LRMDAQ9H2I8 198 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 CUEDC1Q9NWM3 386 aaPredicted RBP11.4□□□□□ -0.58
USP31-201ENST00000219689 UMODL1Q5DID0 1318 aa11.4□□□□□ -0.58
USP31-201ENST00000219689 PKN2Q16513 984 aaKnown RBP11.4□□□□□ -0.58
USP31-201ENST00000219689 EXOC3L1Q86VI1 746 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms