RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 RCOR2Q8IZ40 523 aa11.12□□□□□ -0.63
APOBEC3D-201ENST00000216099 SLC4A11Q8NBS3 891 aa11.12□□□□□ -0.63
APOBEC3D-201ENST00000216099 ARL8AQ96BM9 186 aa11.12□□□□□ -0.63
APOBEC3D-201ENST00000216099 PAWRQ96IZ0 340 aaKnown RBP11.12□□□□□ -0.63
APOBEC3D-201ENST00000216099 RBM41Q96IZ5 413 aaKnown RBP11.12□□□□□ -0.63
APOBEC3D-201ENST00000216099 DCLK3Q9C098 648 aa11.12□□□□□ -0.63
APOBEC3D-201ENST00000216099 SMYD2Q9NRG4 433 aa11.12□□□□□ -0.63
APOBEC3D-201ENST00000216099 ZNF69Q9UC07 566 aa11.12□□□□□ -0.63
APOBEC3D-201ENST00000216099 KIAA1257Q9ULG3 409 aa11.12□□□□□ -0.63
APOBEC3D-201ENST00000216099 HAS3O00219 553 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 GPR32O75388 356 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 IL33O95760 270 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 CPP00450 1065 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 ZNF865P0CJ78 1059 aaPredicted RBP11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 SMIM10L2AP0DMW4 78 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 SMIM10L2BP0DMW5 78 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 AXLP30530 894 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 RPL21P46778 160 aaKnown RBP11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 EIF3BP55884 814 aaKnown RBP11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 PTPN11Q06124 597 aaPredicted RBP11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 ZNF252P-AS1Q0IIN9 211 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 PTK6Q13882 451 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 WDR72Q3MJ13 1102 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 CST9Q5W186 159 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 FBXW10Q5XX13 1052 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 IGF2-ASQ6U949 168 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 PHLDB2Q86SQ0 1253 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 CCDC105Q8IYK2 499 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 KCT2Q8NC54 265 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 FNIP1Q8TF40 1166 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 HPDLQ96IR7 371 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 SMYD3Q9H7B4 428 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 TMBIM4Q9HC24 238 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 ZNF358Q9NW07 568 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 DPP3Q9NY33 737 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 WHRNQ9P202 907 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 MTRF1LQ9UGC7 380 aaKnown RBP11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 TMCC3Q9ULS5 477 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 SYNDIG1LA6NDD5 238 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 F5H423 210 aaPredicted RBP11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 F12P00748 615 aaPredicted RBP11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 RAP1GAPP47736 663 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 SCTRP47872 440 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 DHX9Q08211 1270 aaKnown RBP11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 CCNG2Q16589 344 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 SLC27A1Q6PCB7 646 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 LYPD8Q6UX82 237 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 RUFY4Q6ZNE9 571 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 KAT2BQ92831 832 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 ART4Q93070 314 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 TMEM176AQ96HP8 235 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 ATP6V1G3Q96LB4 118 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 ELOVL4Q9GZR5 314 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 SETD4Q9NVD3 440 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 RRN3Q9NYV6 651 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 ZFATQ9P243 1243 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 CPA4Q9UI42 421 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 SNX24Q9Y343 169 aa11.11□□□□□ -0.63
APOBEC3D-201ENST00000216099 GOLGA6L10A6NI86 522 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 SIGLEC16A6NMB1 481 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 CSDE1O75534 798 aaKnown RBP11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 MAP3K6O95382 1288 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 HMGCRP04035 888 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 GBP2P32456 591 aaPredicted RBP11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 GABRB2P47870 512 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 RPL7AP62424 266 aaKnown RBP11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 ADAM17P78536 824 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 TMPRSS15P98073 1019 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 ZNF268Q14587 947 aaPredicted RBP11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 CNGA2Q16280 664 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 AGBL2Q5U5Z8 902 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 POLNQ7Z5Q5 900 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 TLK2Q86UE8 772 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 SNX27Q96L92 541 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 PPP1R16BQ96T49 567 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 OSBPL8Q9BZF1 889 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 TRIM31Q9BZY9 425 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 RMI1Q9H9A7 625 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 BARX2Q9UMQ3 279 aaPredicted RBP11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 AGAP1Q9UPQ3 857 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 CASP8AP2Q9UKL3 1982 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 IGF2BP3O00425 579 aaKnown RBP eCLIP11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 DYNC1LI2O43237 492 aaPredicted RBP11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 KRT14P02533 472 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 NUDT17P0C025 328 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 RALAP11233 206 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 DARSP14868 501 aaKnown RBP11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 CD19P15391 556 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 DGKGP49619 791 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 PSEN2P49810 448 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 CPT1AP50416 773 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 HUNKP57058 714 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 ZNF844Q08AG5 666 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 STILQ15468 1287 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 PTPN20Q4JDL3 420 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 NOTUMQ6P988 496 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 DCUN1D2Q6PH85 259 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 KDM7AQ6ZMT4 941 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 RNF19BQ6ZMZ0 732 aa11.1□□□□□ -0.63
APOBEC3D-201ENST00000216099 UBLCP1Q8WVY7 318 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms