RNA–Protein interactions for RNA: ENST00000641715.1

SAMMSON-221, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-221ENST00000641715 C1orf167Q5SNV9 1468 aa17.19■□□□□ 0.34
SAMMSON-221ENST00000641715 STAC3Q96MF2 364 aa17.17■□□□□ 0.34
SAMMSON-221ENST00000641715 JCADQ9P266 1359 aa17.17■□□□□ 0.34
SAMMSON-221ENST00000641715 DDX17Q92841 729 aaKnown RBP17.16■□□□□ 0.34
SAMMSON-221ENST00000641715 SIRT1Q96EB6 747 aa17.16■□□□□ 0.34
SAMMSON-221ENST00000641715 NHSL1Q5SYE7 1610 aa17.15■□□□□ 0.34
SAMMSON-221ENST00000641715 ADGRB1O14514 1584 aa17.15■□□□□ 0.34
SAMMSON-221ENST00000641715 CDC42BPGQ6DT37 1551 aa17.15■□□□□ 0.34
SAMMSON-221ENST00000641715 ORAI2Q96SN7 254 aa17.15■□□□□ 0.34
SAMMSON-221ENST00000641715 TRIM26Q12899 539 aaPredicted RBP17.12■□□□□ 0.33
SAMMSON-221ENST00000641715 PRAM1Q96QH2 718 aa17.11■□□□□ 0.33
SAMMSON-221ENST00000641715 SHPRHQ149N8 1683 aa17.11■□□□□ 0.33
SAMMSON-221ENST00000641715 NUTM2FA1L443 756 aa17.11■□□□□ 0.33
SAMMSON-221ENST00000641715 SAFB2Q14151 953 aaKnown RBP eCLIP17.11■□□□□ 0.33
SAMMSON-221ENST00000641715 RGS17Q9UGC6 210 aaPredicted RBP17.11■□□□□ 0.33
SAMMSON-221ENST00000641715 TRAK1Q9UPV9 953 aa17.11■□□□□ 0.33
SAMMSON-221ENST00000641715 DLC1Q96QB1 1528 aa17.1■□□□□ 0.33
SAMMSON-221ENST00000641715 SIN3AQ96ST3 1273 aa17.1■□□□□ 0.33
SAMMSON-221ENST00000641715 ESCO1Q5FWF5 840 aa17.09■□□□□ 0.33
SAMMSON-221ENST00000641715 LRRC59Q96AG4 307 aaKnown RBP17.09■□□□□ 0.33
SAMMSON-221ENST00000641715 SPATA31A6Q5VVP1 1343 aa17.09■□□□□ 0.33
SAMMSON-221ENST00000641715 POGKQ9P215 609 aa17.08■□□□□ 0.32
SAMMSON-221ENST00000641715 FMN2Q9NZ56 1722 aa17.08■□□□□ 0.32
SAMMSON-221ENST00000641715 LRP6O75581 1613 aa17.07■□□□□ 0.32
SAMMSON-221ENST00000641715 SOS2Q07890 1332 aaPredicted RBP17.06■□□□□ 0.32
SAMMSON-221ENST00000641715 L3MBTL2Q969R5 705 aa17.06■□□□□ 0.32
SAMMSON-221ENST00000641715 NEUROD1Q13562 356 aa17.05■□□□□ 0.32
SAMMSON-221ENST00000641715 SOCS7O14512 581 aa17.04■□□□□ 0.32
SAMMSON-221ENST00000641715 FOXO3O43524 673 aa17.04■□□□□ 0.32
SAMMSON-221ENST00000641715 RGPD8O14715 1765 aaPredicted RBP17.04■□□□□ 0.32
SAMMSON-221ENST00000641715 KIAA1210Q9ULL0 1709 aa17.04■□□□□ 0.32
SAMMSON-221ENST00000641715 PNPLA6Q8IY17 1366 aa17.03■□□□□ 0.32
SAMMSON-221ENST00000641715 NUTM2BA6NNL0 878 aaPredicted RBP17.03■□□□□ 0.32
SAMMSON-221ENST00000641715 NUTM2EB1AL46 878 aaPredicted RBP17.03■□□□□ 0.32
SAMMSON-221ENST00000641715 NUTM2AQ8IVF1 878 aaPredicted RBP17.03■□□□□ 0.32
SAMMSON-221ENST00000641715 HIRIP3Q9BW71 556 aaPredicted RBP17.03■□□□□ 0.32
SAMMSON-221ENST00000641715 NPHP3Q7Z494 1330 aa17.02■□□□□ 0.32
SAMMSON-221ENST00000641715 NBPF1Q3BBV0 1214 aa17.02■□□□□ 0.32
SAMMSON-221ENST00000641715 ARHGEF28Q8N1W1 1705 aaKnown RBP17.02■□□□□ 0.31
SAMMSON-221ENST00000641715 MINK1Q8N4C8 1332 aaPredicted RBP17.02■□□□□ 0.31
SAMMSON-221ENST00000641715 ADGRB2O60241 1585 aa17.02■□□□□ 0.31
SAMMSON-221ENST00000641715 XPCQ01831 940 aaPredicted RBP17.01■□□□□ 0.31
SAMMSON-221ENST00000641715 MEX3CQ5U5Q3 659 aaKnown RBP17.01■□□□□ 0.31
SAMMSON-221ENST00000641715 POTEAQ6S8J7 498 aa17.01■□□□□ 0.31
SAMMSON-221ENST00000641715 PXDNQ92626 1479 aa17.01■□□□□ 0.31
SAMMSON-221ENST00000641715 KIF1AQ12756 1690 aa16.99■□□□□ 0.31
SAMMSON-221ENST00000641715 USP32Q8NFA0 1604 aa16.98■□□□□ 0.31
SAMMSON-221ENST00000641715 PHF8Q9UPP1 1060 aa16.98■□□□□ 0.31
SAMMSON-221ENST00000641715 WASLO00401 505 aaPredicted RBP16.97■□□□□ 0.31
SAMMSON-221ENST00000641715 ANKARQ7Z5J8 1434 aa16.97■□□□□ 0.31
SAMMSON-221ENST00000641715 PRR36Q9H6K5 1346 aa16.95■□□□□ 0.3
SAMMSON-221ENST00000641715 KRT28Q7Z3Y7 464 aa16.95■□□□□ 0.3
SAMMSON-221ENST00000641715 COL22A1Q8NFW1 1626 aaPredicted RBP16.94■□□□□ 0.3
SAMMSON-221ENST00000641715 PMFBP1Q8TBY8 1022 aa16.94■□□□□ 0.3
SAMMSON-221ENST00000641715 TULP4Q9NRJ4 1543 aa16.94■□□□□ 0.3
SAMMSON-221ENST00000641715 TRPM1Q7Z4N2 1603 aa16.93■□□□□ 0.3
SAMMSON-221ENST00000641715 ADAMTS2O95450 1211 aa16.93■□□□□ 0.3
SAMMSON-221ENST00000641715 EIF3AQ14152 1382 aaKnown RBP16.92■□□□□ 0.3
SAMMSON-221ENST00000641715 ZNF772Q68DY9 489 aaPredicted RBP16.92■□□□□ 0.3
SAMMSON-221ENST00000641715 C8orf37Q96NL8 207 aa16.92■□□□□ 0.3
SAMMSON-221ENST00000641715 AFF2P51816 1311 aa16.92■□□□□ 0.3
SAMMSON-221ENST00000641715 SPATA31A3Q5VYP0 1347 aa16.92■□□□□ 0.3
SAMMSON-221ENST00000641715 PSME1Q06323 249 aa16.91■□□□□ 0.3
SAMMSON-221ENST00000641715 NBPF8Q3BBV2 869 aa16.91■□□□□ 0.3
SAMMSON-221ENST00000641715 CDK19Q9BWU1 502 aa16.91■□□□□ 0.3
SAMMSON-221ENST00000641715 CENPJQ9HC77 1338 aaPredicted RBP16.89■□□□□ 0.3
SAMMSON-221ENST00000641715 ATP7BP35670 1465 aa16.89■□□□□ 0.29
SAMMSON-221ENST00000641715 NUDT16Q96DE0 195 aaKnown RBP16.89■□□□□ 0.29
SAMMSON-221ENST00000641715 ROCK2O75116 1388 aaKnown RBP16.89■□□□□ 0.29
SAMMSON-221ENST00000641715 NGLY1Q96IV0 654 aa16.88■□□□□ 0.29
SAMMSON-221ENST00000641715 TONSLQ96HA7 1378 aa16.88■□□□□ 0.29
SAMMSON-221ENST00000641715 TNS3Q68CZ2 1445 aa16.88■□□□□ 0.29
SAMMSON-221ENST00000641715 SBNO1A3KN83 1393 aa16.87■□□□□ 0.29
SAMMSON-221ENST00000641715 QRICH2Q9H0J4 1663 aa16.86■□□□□ 0.29
SAMMSON-221ENST00000641715 ITSN1Q15811 1721 aa16.86■□□□□ 0.29
SAMMSON-221ENST00000641715 LMOD2Q6P5Q4 547 aa16.86■□□□□ 0.29
SAMMSON-221ENST00000641715 TRPM3Q9HCF6 1732 aaPredicted RBP16.85■□□□□ 0.29
SAMMSON-221ENST00000641715 MARF1Q9Y4F3 1742 aaKnown RBP16.85■□□□□ 0.29
SAMMSON-221ENST00000641715 NGDNQ8NEJ9 315 aaKnown RBP16.85■□□□□ 0.29
SAMMSON-221ENST00000641715 GPRASP1Q5JY77 1395 aa16.85■□□□□ 0.29
SAMMSON-221ENST00000641715 RXRBP28702 533 aa16.84■□□□□ 0.29
SAMMSON-221ENST00000641715 CABLES1Q8TDN4 633 aa16.84■□□□□ 0.29
SAMMSON-221ENST00000641715 QTRT2Q9H974 415 aaKnown RBP16.84■□□□□ 0.29
SAMMSON-221ENST00000641715 TOPAZ1Q8N9V7 1692 aa16.83■□□□□ 0.29
SAMMSON-221ENST00000641715 FNBP4Q8N3X1 1017 aaPredicted RBP16.83■□□□□ 0.28
SAMMSON-221ENST00000641715 PCGF6Q9BYE7 350 aa16.83■□□□□ 0.28
SAMMSON-221ENST00000641715 CCDC61Q9Y6R9 512 aa16.83■□□□□ 0.28
SAMMSON-221ENST00000641715 ARHGEF10O15013 1369 aa16.82■□□□□ 0.28
SAMMSON-221ENST00000641715 PLEKHG5O94827 1062 aa16.82■□□□□ 0.28
SAMMSON-221ENST00000641715 SRPK2P78362 688 aaKnown RBP16.82■□□□□ 0.28
SAMMSON-221ENST00000641715 CABP2Q9NPB3 220 aa16.82■□□□□ 0.28
SAMMSON-221ENST00000641715 USP21Q9UK80 565 aa16.82■□□□□ 0.28
SAMMSON-221ENST00000641715 ALS2Q96Q42 1657 aa16.81■□□□□ 0.28
SAMMSON-221ENST00000641715 PLEKHG3A1L390 1219 aa16.8■□□□□ 0.28
SAMMSON-221ENST00000641715 POLR3AO14802 1390 aaPredicted RBP16.8■□□□□ 0.28
SAMMSON-221ENST00000641715 ACEP12821 1306 aa16.8■□□□□ 0.28
SAMMSON-221ENST00000641715 CARD11Q9BXL7 1154 aa16.8■□□□□ 0.28
SAMMSON-221ENST00000641715 ABCA3Q99758 1704 aa16.79■□□□□ 0.28
SAMMSON-221ENST00000641715 BCL9LQ86UU0 1499 aa16.79■□□□□ 0.28
SAMMSON-221ENST00000641715 RALGAPBQ86X10 1494 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms