RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 DCAF11Q8TEB1 546 aa24.48■■□□□ 1.51
CACNA1A-259ENST00000638114 DDX17Q92841 729 aaKnown RBP24.48■■□□□ 1.51
CACNA1A-259ENST00000638114 PLEKHH1Q9ULM0 1364 aa24.47■■□□□ 1.51
CACNA1A-259ENST00000638114 SPATA31A6Q5VVP1 1343 aa24.46■■□□□ 1.51
CACNA1A-259ENST00000638114 ORAI2Q96SN7 254 aa24.46■■□□□ 1.51
CACNA1A-259ENST00000638114 RGS17Q9UGC6 210 aaPredicted RBP24.45■■□□□ 1.5
CACNA1A-259ENST00000638114 LRRC59Q96AG4 307 aaKnown RBP24.42■■□□□ 1.5
CACNA1A-259ENST00000638114 STAC3Q96MF2 364 aa24.42■■□□□ 1.5
CACNA1A-259ENST00000638114 LRP6O75581 1613 aa24.42■■□□□ 1.5
CACNA1A-259ENST00000638114 MEX3CQ5U5Q3 659 aaKnown RBP24.41■■□□□ 1.5
CACNA1A-259ENST00000638114 SIRT1Q96EB6 747 aa24.41■■□□□ 1.5
CACNA1A-259ENST00000638114 NUTM2FA1L443 756 aa24.4■■□□□ 1.5
CACNA1A-259ENST00000638114 ADGRB1O14514 1584 aa24.39■■□□□ 1.5
CACNA1A-259ENST00000638114 ESCO1Q5FWF5 840 aa24.39■■□□□ 1.49
CACNA1A-259ENST00000638114 NUTM2BA6NNL0 878 aaPredicted RBP24.38■■□□□ 1.49
CACNA1A-259ENST00000638114 NUTM2EB1AL46 878 aaPredicted RBP24.38■■□□□ 1.49
CACNA1A-259ENST00000638114 NUTM2AQ8IVF1 878 aaPredicted RBP24.38■■□□□ 1.49
CACNA1A-259ENST00000638114 PRAM1Q96QH2 718 aa24.38■■□□□ 1.49
CACNA1A-259ENST00000638114 DLC1Q96QB1 1528 aa24.37■■□□□ 1.49
CACNA1A-259ENST00000638114 SAFB2Q14151 953 aaKnown RBP eCLIP24.37■■□□□ 1.49
CACNA1A-259ENST00000638114 FMN2Q9NZ56 1722 aa24.37■■□□□ 1.49
CACNA1A-259ENST00000638114 POGKQ9P215 609 aa24.36■■□□□ 1.49
CACNA1A-259ENST00000638114 PNPLA6Q8IY17 1366 aa24.36■■□□□ 1.49
CACNA1A-259ENST00000638114 POTEAQ6S8J7 498 aa24.35■■□□□ 1.49
CACNA1A-259ENST00000638114 TRAK1Q9UPV9 953 aa24.35■■□□□ 1.49
CACNA1A-259ENST00000638114 SOS2Q07890 1332 aaPredicted RBP24.35■■□□□ 1.49
CACNA1A-259ENST00000638114 NPHP3Q7Z494 1330 aa24.33■■□□□ 1.48
CACNA1A-259ENST00000638114 FOXO3O43524 673 aa24.3■■□□□ 1.48
CACNA1A-259ENST00000638114 XPCQ01831 940 aaPredicted RBP24.28■■□□□ 1.48
CACNA1A-259ENST00000638114 KIF1AQ12756 1690 aa24.27■■□□□ 1.48
CACNA1A-259ENST00000638114 PXDNQ92626 1479 aa24.27■■□□□ 1.48
CACNA1A-259ENST00000638114 RGPD8O14715 1765 aaPredicted RBP24.26■■□□□ 1.47
CACNA1A-259ENST00000638114 ADGRB2O60241 1585 aa24.26■■□□□ 1.47
CACNA1A-259ENST00000638114 ZNF772Q68DY9 489 aaPredicted RBP24.26■■□□□ 1.47
CACNA1A-259ENST00000638114 HIRIP3Q9BW71 556 aaPredicted RBP24.25■■□□□ 1.47
CACNA1A-259ENST00000638114 MINK1Q8N4C8 1332 aaPredicted RBP24.25■■□□□ 1.47
CACNA1A-259ENST00000638114 ARHGEF28Q8N1W1 1705 aaKnown RBP24.24■■□□□ 1.47
CACNA1A-259ENST00000638114 KIAA1210Q9ULL0 1709 aa24.24■■□□□ 1.47
CACNA1A-259ENST00000638114 C8orf37Q96NL8 207 aa24.22■■□□□ 1.47
CACNA1A-259ENST00000638114 SIN3AQ96ST3 1273 aa24.22■■□□□ 1.47
CACNA1A-259ENST00000638114 PHF8Q9UPP1 1060 aa24.22■■□□□ 1.47
CACNA1A-259ENST00000638114 COL22A1Q8NFW1 1626 aaPredicted RBP24.21■■□□□ 1.47
CACNA1A-259ENST00000638114 ANKARQ7Z5J8 1434 aa24.21■■□□□ 1.47
CACNA1A-259ENST00000638114 AFF2P51816 1311 aa24.21■■□□□ 1.47
CACNA1A-259ENST00000638114 ADAMTS2O95450 1211 aa24.21■■□□□ 1.47
CACNA1A-259ENST00000638114 USP32Q8NFA0 1604 aa24.2■■□□□ 1.46
CACNA1A-259ENST00000638114 NEUROD1Q13562 356 aa24.19■■□□□ 1.46
CACNA1A-259ENST00000638114 L3MBTL2Q969R5 705 aa24.19■■□□□ 1.46
CACNA1A-259ENST00000638114 EIF3AQ14152 1382 aaKnown RBP24.18■■□□□ 1.46
CACNA1A-259ENST00000638114 TRIM26Q12899 539 aaPredicted RBP24.18■■□□□ 1.46
CACNA1A-259ENST00000638114 KRT28Q7Z3Y7 464 aa24.18■■□□□ 1.46
CACNA1A-259ENST00000638114 NBPF1Q3BBV0 1214 aa24.17■■□□□ 1.46
CACNA1A-259ENST00000638114 TULP4Q9NRJ4 1543 aa24.16■■□□□ 1.46
CACNA1A-259ENST00000638114 WASLO00401 505 aaPredicted RBP24.16■■□□□ 1.46
CACNA1A-259ENST00000638114 NGLY1Q96IV0 654 aa24.16■■□□□ 1.46
CACNA1A-259ENST00000638114 SPATA31A3Q5VYP0 1347 aa24.15■■□□□ 1.46
CACNA1A-259ENST00000638114 PMFBP1Q8TBY8 1022 aa24.15■■□□□ 1.46
CACNA1A-259ENST00000638114 PSME1Q06323 249 aa24.14■■□□□ 1.45
CACNA1A-259ENST00000638114 PRR36Q9H6K5 1346 aa24.13■■□□□ 1.45
CACNA1A-259ENST00000638114 TNS3Q68CZ2 1445 aa24.11■■□□□ 1.45
CACNA1A-259ENST00000638114 RXRBP28702 533 aa24.11■■□□□ 1.45
CACNA1A-259ENST00000638114 SBNO1A3KN83 1393 aa24.09■■□□□ 1.45
CACNA1A-259ENST00000638114 MARF1Q9Y4F3 1742 aaKnown RBP24.08■■□□□ 1.45
CACNA1A-259ENST00000638114 LMOD2Q6P5Q4 547 aa24.08■■□□□ 1.45
CACNA1A-259ENST00000638114 QTRT2Q9H974 415 aaKnown RBP24.08■■□□□ 1.45
CACNA1A-259ENST00000638114 USP21Q9UK80 565 aa24.07■■□□□ 1.44
CACNA1A-259ENST00000638114 ITSN1Q15811 1721 aa24.07■■□□□ 1.44
CACNA1A-259ENST00000638114 ATP7BP35670 1465 aa24.07■■□□□ 1.44
CACNA1A-259ENST00000638114 TRPM1Q7Z4N2 1603 aa24.06■■□□□ 1.44
CACNA1A-259ENST00000638114 GPRASP1Q5JY77 1395 aa24.06■■□□□ 1.44
CACNA1A-259ENST00000638114 CDK19Q9BWU1 502 aa24.06■■□□□ 1.44
CACNA1A-259ENST00000638114 PLEKHG5O94827 1062 aa24.05■■□□□ 1.44
CACNA1A-259ENST00000638114 NGDNQ8NEJ9 315 aaKnown RBP24.05■■□□□ 1.44
CACNA1A-259ENST00000638114 NUDT16Q96DE0 195 aaKnown RBP24.05■■□□□ 1.44
CACNA1A-259ENST00000638114 CENPJQ9HC77 1338 aaPredicted RBP24.05■■□□□ 1.44
CACNA1A-259ENST00000638114 ARHGEF10O15013 1369 aa24.04■■□□□ 1.44
CACNA1A-259ENST00000638114 HAP1P54257 671 aaPredicted RBP24.04■■□□□ 1.44
CACNA1A-259ENST00000638114 FNBP4Q8N3X1 1017 aaPredicted RBP24.04■■□□□ 1.44
CACNA1A-259ENST00000638114 CDK12Q9NYV4 1490 aaPredicted RBP24.03■■□□□ 1.44
CACNA1A-259ENST00000638114 RBM6P78332 1123 aaKnown RBP24.03■■□□□ 1.44
CACNA1A-259ENST00000638114 TRPM3Q9HCF6 1732 aaPredicted RBP24.03■■□□□ 1.44
CACNA1A-259ENST00000638114 CABLES1Q8TDN4 633 aa24.02■■□□□ 1.44
CACNA1A-259ENST00000638114 ROCK2O75116 1388 aaKnown RBP24.02■■□□□ 1.44
CACNA1A-259ENST00000638114 QRICH2Q9H0J4 1663 aa24.02■■□□□ 1.44
CACNA1A-259ENST00000638114 TRPC5Q9UL62 973 aaPredicted RBP24.01■■□□□ 1.43
CACNA1A-259ENST00000638114 TOPAZ1Q8N9V7 1692 aa23.99■■□□□ 1.43
CACNA1A-259ENST00000638114 ABCA3Q99758 1704 aa23.99■■□□□ 1.43
CACNA1A-259ENST00000638114 TONSLQ96HA7 1378 aa23.99■■□□□ 1.43
CACNA1A-259ENST00000638114 RGS12O14924 1447 aa23.98■■□□□ 1.43
CACNA1A-259ENST00000638114 ALS2Q96Q42 1657 aa23.98■■□□□ 1.43
CACNA1A-259ENST00000638114 ATRNO75882 1429 aa23.97■■□□□ 1.43
CACNA1A-259ENST00000638114 PAK3O75914 559 aaPredicted RBP23.97■■□□□ 1.43
CACNA1A-259ENST00000638114 SRPK2P78362 688 aaKnown RBP23.97■■□□□ 1.43
CACNA1A-259ENST00000638114 CCDC61Q9Y6R9 512 aa23.97■■□□□ 1.43
CACNA1A-259ENST00000638114 BCL9LQ86UU0 1499 aa23.96■■□□□ 1.43
CACNA1A-259ENST00000638114 NBPF8Q3BBV2 869 aa23.96■■□□□ 1.43
CACNA1A-259ENST00000638114 CABP2Q9NPB3 220 aa23.94■■□□□ 1.42
CACNA1A-259ENST00000638114 SLIT2O94813 1529 aa23.93■■□□□ 1.42
CACNA1A-259ENST00000638114 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.93■■□□□ 1.42
CACNA1A-259ENST00000638114 POLR3AO14802 1390 aaPredicted RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms