RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 SIRT1Q96EB6 747 aa20.07■□□□□ 0.8
PNKP-228ENST00000637325 CDC42BPGQ6DT37 1551 aa20.07■□□□□ 0.8
PNKP-228ENST00000637325 PLEKHH1Q9ULM0 1364 aa20.07■□□□□ 0.8
PNKP-228ENST00000637325 ORAI2Q96SN7 254 aa20.06■□□□□ 0.8
PNKP-228ENST00000637325 SPATA31A6Q5VVP1 1343 aa20.05■□□□□ 0.8
PNKP-228ENST00000637325 SOCS7O14512 581 aa20.05■□□□□ 0.8
PNKP-228ENST00000637325 DDX17Q92841 729 aaKnown RBP20.05■□□□□ 0.8
PNKP-228ENST00000637325 LRRC59Q96AG4 307 aaKnown RBP20.05■□□□□ 0.8
PNKP-228ENST00000637325 ESCO1Q5FWF5 840 aa20.04■□□□□ 0.8
PNKP-228ENST00000637325 MEX3CQ5U5Q3 659 aaKnown RBP20.04■□□□□ 0.8
PNKP-228ENST00000637325 POGKQ9P215 609 aa20.04■□□□□ 0.8
PNKP-228ENST00000637325 NUTM2FA1L443 756 aa20.03■□□□□ 0.8
PNKP-228ENST00000637325 SAFB2Q14151 953 aaKnown RBP eCLIP20.02■□□□□ 0.8
PNKP-228ENST00000637325 PRAM1Q96QH2 718 aa20.02■□□□□ 0.8
PNKP-228ENST00000637325 FMN2Q9NZ56 1722 aa20.02■□□□□ 0.79
PNKP-228ENST00000637325 RGPD8O14715 1765 aaPredicted RBP20.01■□□□□ 0.79
PNKP-228ENST00000637325 NUTM2BA6NNL0 878 aaPredicted RBP20.01■□□□□ 0.79
PNKP-228ENST00000637325 NUTM2EB1AL46 878 aaPredicted RBP20.01■□□□□ 0.79
PNKP-228ENST00000637325 NUTM2AQ8IVF1 878 aaPredicted RBP20.01■□□□□ 0.79
PNKP-228ENST00000637325 TRAK1Q9UPV9 953 aa20.01■□□□□ 0.79
PNKP-228ENST00000637325 RGS17Q9UGC6 210 aaPredicted RBP20■□□□□ 0.79
PNKP-228ENST00000637325 DLC1Q96QB1 1528 aa20■□□□□ 0.79
PNKP-228ENST00000637325 ADGRB1O14514 1584 aa20■□□□□ 0.79
PNKP-228ENST00000637325 LRP6O75581 1613 aa19.97■□□□□ 0.79
PNKP-228ENST00000637325 NPHP3Q7Z494 1330 aa19.97■□□□□ 0.79
PNKP-228ENST00000637325 TRIM26Q12899 539 aaPredicted RBP19.96■□□□□ 0.79
PNKP-228ENST00000637325 SOS2Q07890 1332 aaPredicted RBP19.96■□□□□ 0.79
PNKP-228ENST00000637325 KIAA1210Q9ULL0 1709 aa19.96■□□□□ 0.79
PNKP-228ENST00000637325 PNPLA6Q8IY17 1366 aa19.95■□□□□ 0.78
PNKP-228ENST00000637325 FOXO3O43524 673 aa19.94■□□□□ 0.78
PNKP-228ENST00000637325 KIF1AQ12756 1690 aa19.94■□□□□ 0.78
PNKP-228ENST00000637325 NEUROD1Q13562 356 aa19.93■□□□□ 0.78
PNKP-228ENST00000637325 POTEAQ6S8J7 498 aa19.93■□□□□ 0.78
PNKP-228ENST00000637325 SIN3AQ96ST3 1273 aa19.93■□□□□ 0.78
PNKP-228ENST00000637325 ARHGEF28Q8N1W1 1705 aaKnown RBP19.92■□□□□ 0.78
PNKP-228ENST00000637325 MINK1Q8N4C8 1332 aaPredicted RBP19.92■□□□□ 0.78
PNKP-228ENST00000637325 XPCQ01831 940 aaPredicted RBP19.91■□□□□ 0.78
PNKP-228ENST00000637325 HIRIP3Q9BW71 556 aaPredicted RBP19.91■□□□□ 0.78
PNKP-228ENST00000637325 ZNF772Q68DY9 489 aaPredicted RBP19.9■□□□□ 0.78
PNKP-228ENST00000637325 ADGRB2O60241 1585 aa19.89■□□□□ 0.77
PNKP-228ENST00000637325 L3MBTL2Q969R5 705 aa19.89■□□□□ 0.77
PNKP-228ENST00000637325 PHF8Q9UPP1 1060 aa19.89■□□□□ 0.77
PNKP-228ENST00000637325 PXDNQ92626 1479 aa19.88■□□□□ 0.77
PNKP-228ENST00000637325 EIF3AQ14152 1382 aaKnown RBP19.87■□□□□ 0.77
PNKP-228ENST00000637325 ADAMTS2O95450 1211 aa19.87■□□□□ 0.77
PNKP-228ENST00000637325 C8orf37Q96NL8 207 aa19.87■□□□□ 0.77
PNKP-228ENST00000637325 NBPF1Q3BBV0 1214 aa19.86■□□□□ 0.77
PNKP-228ENST00000637325 KRT28Q7Z3Y7 464 aa19.86■□□□□ 0.77
PNKP-228ENST00000637325 ANKARQ7Z5J8 1434 aa19.85■□□□□ 0.77
PNKP-228ENST00000637325 COL22A1Q8NFW1 1626 aaPredicted RBP19.85■□□□□ 0.77
PNKP-228ENST00000637325 WASLO00401 505 aaPredicted RBP19.85■□□□□ 0.77
PNKP-228ENST00000637325 PSME1Q06323 249 aa19.85■□□□□ 0.77
PNKP-228ENST00000637325 USP32Q8NFA0 1604 aa19.84■□□□□ 0.77
PNKP-228ENST00000637325 AFF2P51816 1311 aa19.84■□□□□ 0.77
PNKP-228ENST00000637325 PMFBP1Q8TBY8 1022 aa19.84■□□□□ 0.77
PNKP-228ENST00000637325 NGLY1Q96IV0 654 aa19.83■□□□□ 0.77
PNKP-228ENST00000637325 TULP4Q9NRJ4 1543 aa19.81■□□□□ 0.76
PNKP-228ENST00000637325 ITSN1Q15811 1721 aa19.81■□□□□ 0.76
PNKP-228ENST00000637325 MARF1Q9Y4F3 1742 aaKnown RBP19.81■□□□□ 0.76
PNKP-228ENST00000637325 SPATA31A3Q5VYP0 1347 aa19.8■□□□□ 0.76
PNKP-228ENST00000637325 RXRBP28702 533 aa19.79■□□□□ 0.76
PNKP-228ENST00000637325 LMOD2Q6P5Q4 547 aa19.79■□□□□ 0.76
PNKP-228ENST00000637325 PRR36Q9H6K5 1346 aa19.78■□□□□ 0.76
PNKP-228ENST00000637325 TRPM1Q7Z4N2 1603 aa19.78■□□□□ 0.76
PNKP-228ENST00000637325 CDK19Q9BWU1 502 aa19.78■□□□□ 0.76
PNKP-228ENST00000637325 NGDNQ8NEJ9 315 aaKnown RBP19.77■□□□□ 0.76
PNKP-228ENST00000637325 GPRASP1Q5JY77 1395 aa19.77■□□□□ 0.76
PNKP-228ENST00000637325 CENPJQ9HC77 1338 aaPredicted RBP19.76■□□□□ 0.75
PNKP-228ENST00000637325 TNS3Q68CZ2 1445 aa19.76■□□□□ 0.75
PNKP-228ENST00000637325 SBNO1A3KN83 1393 aa19.76■□□□□ 0.75
PNKP-228ENST00000637325 PLEKHG5O94827 1062 aa19.76■□□□□ 0.75
PNKP-228ENST00000637325 HAP1P54257 671 aaPredicted RBP19.76■□□□□ 0.75
PNKP-228ENST00000637325 NUDT16Q96DE0 195 aaKnown RBP19.76■□□□□ 0.75
PNKP-228ENST00000637325 QTRT2Q9H974 415 aaKnown RBP19.76■□□□□ 0.75
PNKP-228ENST00000637325 QRICH2Q9H0J4 1663 aa19.75■□□□□ 0.75
PNKP-228ENST00000637325 ROCK2O75116 1388 aaKnown RBP19.74■□□□□ 0.75
PNKP-228ENST00000637325 TONSLQ96HA7 1378 aa19.74■□□□□ 0.75
PNKP-228ENST00000637325 USP21Q9UK80 565 aa19.74■□□□□ 0.75
PNKP-228ENST00000637325 ARHGEF10O15013 1369 aa19.73■□□□□ 0.75
PNKP-228ENST00000637325 TRPM3Q9HCF6 1732 aaPredicted RBP19.72■□□□□ 0.75
PNKP-228ENST00000637325 ATP7BP35670 1465 aa19.72■□□□□ 0.75
PNKP-228ENST00000637325 PAK3O75914 559 aaPredicted RBP19.71■□□□□ 0.75
PNKP-228ENST00000637325 RBM6P78332 1123 aaKnown RBP19.71■□□□□ 0.75
PNKP-228ENST00000637325 SRPK2P78362 688 aaKnown RBP19.71■□□□□ 0.75
PNKP-228ENST00000637325 FNBP4Q8N3X1 1017 aaPredicted RBP19.71■□□□□ 0.75
PNKP-228ENST00000637325 CABLES1Q8TDN4 633 aa19.7■□□□□ 0.74
PNKP-228ENST00000637325 TRPC5Q9UL62 973 aaPredicted RBP19.7■□□□□ 0.74
PNKP-228ENST00000637325 CCDC61Q9Y6R9 512 aa19.7■□□□□ 0.74
PNKP-228ENST00000637325 NBPF8Q3BBV2 869 aa19.69■□□□□ 0.74
PNKP-228ENST00000637325 TOPAZ1Q8N9V7 1692 aa19.68■□□□□ 0.74
PNKP-228ENST00000637325 ABCA3Q99758 1704 aa19.68■□□□□ 0.74
PNKP-228ENST00000637325 ALS2Q96Q42 1657 aa19.68■□□□□ 0.74
PNKP-228ENST00000637325 CABP2Q9NPB3 220 aa19.67■□□□□ 0.74
PNKP-228ENST00000637325 CDK12Q9NYV4 1490 aaPredicted RBP19.67■□□□□ 0.74
PNKP-228ENST00000637325 ACEP12821 1306 aa19.65■□□□□ 0.74
PNKP-228ENST00000637325 EVC2Q86UK5 1308 aa19.65■□□□□ 0.74
PNKP-228ENST00000637325 PLEKHG3A1L390 1219 aa19.64■□□□□ 0.73
PNKP-228ENST00000637325 CARD11Q9BXL7 1154 aa19.64■□□□□ 0.73
PNKP-228ENST00000637325 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.64■□□□□ 0.73
PNKP-228ENST00000637325 ATRNO75882 1429 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms