RNA–Protein interactions for RNA: ENST00000637278.1

CLN5-217, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 2

Gene CLN5, Length 2,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-217ENST00000637278 IQSEC2Q5JU85 1478 aa10.32□□□□□ -0.76
CLN5-217ENST00000637278 PATL2C9JE40 543 aaKnown RBP10.32□□□□□ -0.76
CLN5-217ENST00000637278 CCDC141Q6ZP82 1450 aa10.32□□□□□ -0.76
CLN5-217ENST00000637278 CLTCQ00610 1675 aaKnown RBP10.31□□□□□ -0.76
CLN5-217ENST00000637278 STRCQ7RTU9 1775 aa10.31□□□□□ -0.76
CLN5-217ENST00000637278 NOL8Q76FK4 1167 aaKnown RBP10.31□□□□□ -0.76
CLN5-217ENST00000637278 IVNS1ABPQ9Y6Y0 642 aa10.31□□□□□ -0.76
CLN5-217ENST00000637278 MYO3AQ8NEV4 1616 aa10.31□□□□□ -0.76
CLN5-217ENST00000637278 RFX1P22670 979 aa10.31□□□□□ -0.76
CLN5-217ENST00000637278 U3KPZ7 1027 aaPredicted RBP10.31□□□□□ -0.76
CLN5-217ENST00000637278 VPS8Q8N3P4 1428 aa10.3□□□□□ -0.76
CLN5-217ENST00000637278 MAST1Q9Y2H9 1570 aa10.3□□□□□ -0.76
CLN5-217ENST00000637278 FAM50AQ14320 339 aaKnown RBP10.3□□□□□ -0.76
CLN5-217ENST00000637278 SKIV2LQ15477 1246 aaKnown RBP10.3□□□□□ -0.76
CLN5-217ENST00000637278 FNBP4Q8N3X1 1017 aaPredicted RBP10.3□□□□□ -0.76
CLN5-217ENST00000637278 MBD5Q9P267 1494 aa10.3□□□□□ -0.76
CLN5-217ENST00000637278 CAMSAP2Q08AD1 1489 aa10.3□□□□□ -0.76
CLN5-217ENST00000637278 NCOA2Q15596 1464 aa10.3□□□□□ -0.76
CLN5-217ENST00000637278 FOXD4L6Q3SYB3 417 aaPredicted RBP10.29□□□□□ -0.76
CLN5-217ENST00000637278 FOXD4L3Q6VB84 417 aaPredicted RBP10.29□□□□□ -0.76
CLN5-217ENST00000637278 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.29□□□□□ -0.76
CLN5-217ENST00000637278 PLA2R1Q13018 1463 aa10.29□□□□□ -0.76
CLN5-217ENST00000637278 ZC3H13Q5T200 1668 aaKnown RBP10.29□□□□□ -0.76
CLN5-217ENST00000637278 GIMAP6Q6P9H5 292 aa10.29□□□□□ -0.76
CLN5-217ENST00000637278 IGSF5Q9NSI5 407 aa10.29□□□□□ -0.76
CLN5-217ENST00000637278 EIF2AK4Q9P2K8 1649 aaKnown RBP10.29□□□□□ -0.76
CLN5-217ENST00000637278 CNGB1Q14028 1251 aaPredicted RBP10.28□□□□□ -0.76
CLN5-217ENST00000637278 NCOA1Q15788 1441 aa10.28□□□□□ -0.76
CLN5-217ENST00000637278 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.28□□□□□ -0.76
CLN5-217ENST00000637278 MSH5O43196 834 aa10.28□□□□□ -0.76
CLN5-217ENST00000637278 MARCH6O60337 910 aa10.28□□□□□ -0.76
CLN5-217ENST00000637278 KDM5DQ9BY66 1539 aa10.28□□□□□ -0.76
CLN5-217ENST00000637278 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.28□□□□□ -0.76
CLN5-217ENST00000637278 A6NJR5 290 aa10.28□□□□□ -0.76
CLN5-217ENST00000637278 PLSCR2Q9NRY7 297 aa10.28□□□□□ -0.76
CLN5-217ENST00000637278 VTI1AQ96AJ9 217 aa10.27□□□□□ -0.77
CLN5-217ENST00000637278 SLC52A1Q9NWF4 448 aa10.27□□□□□ -0.77
CLN5-217ENST00000637278 CEP170BQ9Y4F5 1589 aaPredicted RBP10.27□□□□□ -0.77
CLN5-217ENST00000637278 HSPA2P54652 639 aa10.27□□□□□ -0.77
CLN5-217ENST00000637278 FLIIQ13045 1269 aa10.27□□□□□ -0.77
CLN5-217ENST00000637278 OS9Q13438 667 aaPredicted RBP10.27□□□□□ -0.77
CLN5-217ENST00000637278 LRRC9Q6ZRR7 1453 aa10.26□□□□□ -0.77
CLN5-217ENST00000637278 LOC102724159A0A0B4J2E5 919 aa10.26□□□□□ -0.77
CLN5-217ENST00000637278 HNRNPMP52272 730 aaKnown RBP eCLIP10.26□□□□□ -0.77
CLN5-217ENST00000637278 PWP2Q15269 919 aaKnown RBP10.26□□□□□ -0.77
CLN5-217ENST00000637278 RNF17Q9BXT8 1623 aaKnown RBP10.26□□□□□ -0.77
CLN5-217ENST00000637278 DHX29Q7Z478 1369 aaKnown RBP10.26□□□□□ -0.77
CLN5-217ENST00000637278 FAM193AP78312 1265 aa10.26□□□□□ -0.77
CLN5-217ENST00000637278 MIA2Q96PC5 1412 aa10.26□□□□□ -0.77
CLN5-217ENST00000637278 ZMYM3Q14202 1370 aa10.26□□□□□ -0.77
CLN5-217ENST00000637278 DCAF8L1A6NGE4 600 aa10.25□□□□□ -0.77
CLN5-217ENST00000637278 PTPRKQ15262 1439 aa10.25□□□□□ -0.77
CLN5-217ENST00000637278 CERKQ8TCT0 537 aa10.25□□□□□ -0.77
CLN5-217ENST00000637278 MRRFQ96E11 262 aaKnown RBP10.25□□□□□ -0.77
CLN5-217ENST00000637278 GRIPAP1Q4V328 841 aa10.25□□□□□ -0.77
CLN5-217ENST00000637278 RTL5Q5HYW3 569 aaPredicted RBP10.25□□□□□ -0.77
CLN5-217ENST00000637278 FAM9BQ8IZU0 186 aa10.25□□□□□ -0.77
CLN5-217ENST00000637278 CAMSAP1Q5T5Y3 1602 aa10.25□□□□□ -0.77
CLN5-217ENST00000637278 RIOK3O14730 519 aaKnown RBP10.24□□□□□ -0.77
CLN5-217ENST00000637278 CEBPAP49715 358 aaPredicted RBP10.24□□□□□ -0.77
CLN5-217ENST00000637278 A2ML1A8K2U0 1454 aa10.24□□□□□ -0.77
CLN5-217ENST00000637278 PZPP20742 1482 aa10.23□□□□□ -0.77
CLN5-217ENST00000637278 PTMSP20962 102 aa10.23□□□□□ -0.77
CLN5-217ENST00000637278 SHANK2Q9UPX8 1470 aa10.23□□□□□ -0.77
CLN5-217ENST00000637278 CC2D2BQ6DHV5 1058 aa10.23□□□□□ -0.77
CLN5-217ENST00000637278 POLR1AO95602 1720 aaPredicted RBP10.22□□□□□ -0.77
CLN5-217ENST00000637278 PEX14O75381 377 aa10.22□□□□□ -0.77
CLN5-217ENST00000637278 CROCC2H7BZ55 1655 aa10.22□□□□□ -0.77
CLN5-217ENST00000637278 PARP9Q8IXQ6 854 aa10.22□□□□□ -0.77
CLN5-217ENST00000637278 TCOF1Q13428 1488 aaKnown RBP10.22□□□□□ -0.77
CLN5-217ENST00000637278 MYOM3Q5VTT5 1437 aa10.21□□□□□ -0.77
CLN5-217ENST00000637278 SPATA32Q96LK8 384 aa10.21□□□□□ -0.77
CLN5-217ENST00000637278 NLRP1Q9C000 1473 aa10.21□□□□□ -0.77
CLN5-217ENST00000637278 LTBP4Q8N2S1 1624 aa10.21□□□□□ -0.78
CLN5-217ENST00000637278 GPIHBP1Q8IV16 184 aa10.2□□□□□ -0.78
CLN5-217ENST00000637278 SPINK5Q9NQ38 1064 aaPredicted RBP10.2□□□□□ -0.78
CLN5-217ENST00000637278 SERPINA10Q9UK55 444 aa10.2□□□□□ -0.78
CLN5-217ENST00000637278 ANKRD62A6NC57 917 aa10.2□□□□□ -0.78
CLN5-217ENST00000637278 EVI5LQ96CN4 794 aa10.2□□□□□ -0.78
CLN5-217ENST00000637278 RBM19Q9Y4C8 960 aaKnown RBP10.2□□□□□ -0.78
CLN5-217ENST00000637278 DUOX2Q9NRD8 1548 aa10.2□□□□□ -0.78
CLN5-217ENST00000637278 SOX12O15370 315 aa10.2□□□□□ -0.78
CLN5-217ENST00000637278 TSPY4P0CV99 314 aa10.2□□□□□ -0.78
CLN5-217ENST00000637278 TSPY10P0CW01 314 aa10.2□□□□□ -0.78
CLN5-217ENST00000637278 ARHGEF1Q92888 912 aaKnown RBP10.2□□□□□ -0.78
CLN5-217ENST00000637278 DNMT1P26358 1616 aaKnown RBP10.19□□□□□ -0.78
CLN5-217ENST00000637278 POM121CA8CG34 1229 aa10.19□□□□□ -0.78
CLN5-217ENST00000637278 RGS3P49796 1198 aa10.19□□□□□ -0.78
CLN5-217ENST00000637278 E2F4Q16254 413 aa10.19□□□□□ -0.78
CLN5-217ENST00000637278 RAB11FIP3O75154 756 aa10.19□□□□□ -0.78
CLN5-217ENST00000637278 DEPDC5O75140 1603 aa10.18□□□□□ -0.78
CLN5-217ENST00000637278 PTMAP06454 111 aaKnown RBP10.18□□□□□ -0.78
CLN5-217ENST00000637278 ANAPC15P60006 121 aa10.18□□□□□ -0.78
CLN5-217ENST00000637278 MICAL1Q8TDZ2 1067 aa10.18□□□□□ -0.78
CLN5-217ENST00000637278 KAT6BQ8WYB5 2073 aa10.18□□□□□ -0.78
CLN5-217ENST00000637278 TNRQ92752 1358 aa10.18□□□□□ -0.78
CLN5-217ENST00000637278 SGSM3Q96HU1 749 aa10.18□□□□□ -0.78
CLN5-217ENST00000637278 ZNF644Q9H582 1327 aaPredicted RBP10.17□□□□□ -0.78
CLN5-217ENST00000637278 PPP1R37O75864 691 aa10.17□□□□□ -0.78
CLN5-217ENST00000637278 ZNF830Q96NB3 372 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms