RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 NOP58Q9Y2X3 529 aaKnown RBP5.83□□□□□ -1.48
SCN1A-210ENST00000635776 GLI2P10070 1586 aa5.82□□□□□ -1.48
SCN1A-210ENST00000635776 COG3Q96JB2 828 aa5.82□□□□□ -1.48
SCN1A-210ENST00000635776 IL16Q14005 1332 aa5.82□□□□□ -1.48
SCN1A-210ENST00000635776 KIF16BQ96L93 1317 aa5.82□□□□□ -1.48
SCN1A-210ENST00000635776 DEPDC5O75140 1603 aa5.82□□□□□ -1.48
SCN1A-210ENST00000635776 ABCC3O15438 1527 aa5.82□□□□□ -1.48
SCN1A-210ENST00000635776 ZKSCAN2Q63HK3 967 aa5.82□□□□□ -1.48
SCN1A-210ENST00000635776 ADGRB3O60242 1522 aa5.82□□□□□ -1.48
SCN1A-210ENST00000635776 NKTRP30414 1462 aaKnown RBP5.81□□□□□ -1.48
SCN1A-210ENST00000635776 KIAA1210Q9ULL0 1709 aa5.81□□□□□ -1.48
SCN1A-210ENST00000635776 IPO9Q96P70 1041 aaKnown RBP5.81□□□□□ -1.48
SCN1A-210ENST00000635776 POLR1AO95602 1720 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-210ENST00000635776 SLC12A5Q9H2X9 1139 aa5.81□□□□□ -1.48
SCN1A-210ENST00000635776 NRXN1Q9ULB1 1477 aa5.81□□□□□ -1.48
SCN1A-210ENST00000635776 FCHSD2O94868 740 aa5.81□□□□□ -1.48
SCN1A-210ENST00000635776 THEMISQ8N1K5 641 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-210ENST00000635776 TMEM132EQ6IEE7 984 aa5.81□□□□□ -1.48
SCN1A-210ENST00000635776 MADDQ8WXG6 1647 aa5.81□□□□□ -1.48
SCN1A-210ENST00000635776 AGLP35573 1532 aa5.81□□□□□ -1.48
SCN1A-210ENST00000635776 MTHFSP49914 203 aa5.81□□□□□ -1.48
SCN1A-210ENST00000635776 MLECQ14165 292 aa5.81□□□□□ -1.48
SCN1A-210ENST00000635776 MAP3K4Q9Y6R4 1608 aa5.81□□□□□ -1.48
SCN1A-210ENST00000635776 MINK1Q8N4C8 1332 aaPredicted RBP5.81□□□□□ -1.48
SCN1A-210ENST00000635776 GNAI1P63096 354 aa5.81□□□□□ -1.48
SCN1A-210ENST00000635776 EXOC6Q8TAG9 804 aa5.81□□□□□ -1.48
SCN1A-210ENST00000635776 DDX19BQ9UMR2 479 aa5.81□□□□□ -1.48
SCN1A-210ENST00000635776 TCP11L2Q8N4U5 519 aa5.81□□□□□ -1.48
SCN1A-210ENST00000635776 PRAM1Q96QH2 718 aa5.81□□□□□ -1.48
SCN1A-210ENST00000635776 RNF17Q9BXT8 1623 aaKnown RBP5.8□□□□□ -1.48
SCN1A-210ENST00000635776 USP35Q9P2H5 1018 aa5.8□□□□□ -1.48
SCN1A-210ENST00000635776 NEUROD2Q15784 382 aa5.8□□□□□ -1.48
SCN1A-210ENST00000635776 TNNT2P45379 298 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-210ENST00000635776 ERVK-7P63135 1459 aa5.8□□□□□ -1.48
SCN1A-210ENST00000635776 FAM161AQ3B820 660 aa5.8□□□□□ -1.48
SCN1A-210ENST00000635776 FRAT1Q92837 279 aaPredicted RBP5.8□□□□□ -1.48
SCN1A-210ENST00000635776 HDAC5Q9UQL6 1122 aa5.8□□□□□ -1.48
SCN1A-210ENST00000635776 CCDC61Q9Y6R9 512 aa5.8□□□□□ -1.48
SCN1A-210ENST00000635776 BCL11AQ9H165 835 aa5.79□□□□□ -1.48
SCN1A-210ENST00000635776 TNRQ92752 1358 aa5.79□□□□□ -1.48
SCN1A-210ENST00000635776 SAFB2Q14151 953 aaKnown RBP eCLIP5.79□□□□□ -1.48
SCN1A-210ENST00000635776 SPHKAPQ2M3C7 1700 aa5.79□□□□□ -1.48
SCN1A-210ENST00000635776 YTHDC2Q9H6S0 1430 aaKnown RBP5.79□□□□□ -1.48
SCN1A-210ENST00000635776 DUSP27Q5VZP5 1158 aa5.79□□□□□ -1.48
SCN1A-210ENST00000635776 CDK19Q9BWU1 502 aa5.79□□□□□ -1.48
SCN1A-210ENST00000635776 KDM5AP29375 1690 aaKnown RBP5.79□□□□□ -1.48
SCN1A-210ENST00000635776 ZC3H13Q5T200 1668 aaKnown RBP5.79□□□□□ -1.48
SCN1A-210ENST00000635776 CCDC146Q8IYE0 955 aa5.79□□□□□ -1.48
SCN1A-210ENST00000635776 CRBNQ96SW2 442 aa5.79□□□□□ -1.48
SCN1A-210ENST00000635776 WWC1Q8IX03 1113 aa5.79□□□□□ -1.48
SCN1A-210ENST00000635776 API5Q9BZZ5 524 aaKnown RBP5.79□□□□□ -1.48
SCN1A-210ENST00000635776 CLTCL1P53675 1640 aa5.79□□□□□ -1.48
SCN1A-210ENST00000635776 CABP2Q9NPB3 220 aa5.79□□□□□ -1.48
SCN1A-210ENST00000635776 PDE4AP27815 886 aa5.78□□□□□ -1.48
SCN1A-210ENST00000635776 CLUAP1Q96AJ1 413 aa5.78□□□□□ -1.48
SCN1A-210ENST00000635776 SMC4Q9NTJ3 1288 aa5.78□□□□□ -1.48
SCN1A-210ENST00000635776 RIMS2Q9UQ26 1411 aa5.78□□□□□ -1.48
SCN1A-210ENST00000635776 E9PCH4 1651 aa5.78□□□□□ -1.48
SCN1A-210ENST00000635776 CDCA7LQ96GN5 454 aa5.78□□□□□ -1.48
SCN1A-210ENST00000635776 DZIP1LQ8IYY4 767 aaKnown RBP5.77□□□□□ -1.48
SCN1A-210ENST00000635776 RTF1Q92541 710 aaKnown RBP5.77□□□□□ -1.48
SCN1A-210ENST00000635776 ALDH1L2Q3SY69 923 aa5.77□□□□□ -1.49
SCN1A-210ENST00000635776 WASLO00401 505 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-210ENST00000635776 NPM2Q86SE8 214 aaKnown RBP5.77□□□□□ -1.49
SCN1A-210ENST00000635776 ZMYM3Q14202 1370 aa5.77□□□□□ -1.49
SCN1A-210ENST00000635776 NUTM2DQ5VT03 806 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-210ENST00000635776 CASC1Q6TDU7 716 aa5.77□□□□□ -1.49
SCN1A-210ENST00000635776 MED14O60244 1454 aa5.77□□□□□ -1.49
SCN1A-210ENST00000635776 RIPK4P57078 832 aa5.76□□□□□ -1.49
SCN1A-210ENST00000635776 GGNBP2Q9H3C7 697 aa5.76□□□□□ -1.49
SCN1A-210ENST00000635776 BCORL1Q5H9F3 1711 aa5.76□□□□□ -1.49
SCN1A-210ENST00000635776 CABP1Q9NZU7 370 aa5.76□□□□□ -1.49
SCN1A-210ENST00000635776 REREQ9P2R6 1566 aa5.76□□□□□ -1.49
SCN1A-210ENST00000635776 CEP152O94986 1710 aa5.76□□□□□ -1.49
SCN1A-210ENST00000635776 FAM135BQ49AJ0 1406 aa5.76□□□□□ -1.49
SCN1A-210ENST00000635776 TTC21AQ8NDW8 1320 aa5.76□□□□□ -1.49
SCN1A-210ENST00000635776 CARD14Q9BXL6 1004 aa5.76□□□□□ -1.49
SCN1A-210ENST00000635776 TXNDC2Q86VQ3 553 aa5.76□□□□□ -1.49
SCN1A-210ENST00000635776 ZNF521Q96K83 1311 aa5.76□□□□□ -1.49
SCN1A-210ENST00000635776 KIF1BO60333 1816 aa5.76□□□□□ -1.49
SCN1A-210ENST00000635776 ATP7BP35670 1465 aa5.75□□□□□ -1.49
SCN1A-210ENST00000635776 NGDNQ8NEJ9 315 aaKnown RBP5.75□□□□□ -1.49
SCN1A-210ENST00000635776 DIP2CQ9Y2E4 1556 aa5.75□□□□□ -1.49
SCN1A-210ENST00000635776 UGGT1Q9NYU2 1555 aa5.75□□□□□ -1.49
SCN1A-210ENST00000635776 HMMRO75330 724 aa5.75□□□□□ -1.49
SCN1A-210ENST00000635776 YEATS2Q9ULM3 1422 aa5.75□□□□□ -1.49
SCN1A-210ENST00000635776 PTMSP20962 102 aa5.75□□□□□ -1.49
SCN1A-210ENST00000635776 NUDT16Q96DE0 195 aaKnown RBP5.75□□□□□ -1.49
SCN1A-210ENST00000635776 TBX22Q9Y458 520 aa5.75□□□□□ -1.49
SCN1A-210ENST00000635776 TTC21BQ7Z4L5 1316 aa5.75□□□□□ -1.49
SCN1A-210ENST00000635776 NLRP1Q9C000 1473 aa5.75□□□□□ -1.49
SCN1A-210ENST00000635776 TRMT2AQ8IZ69 625 aaKnown RBP5.75□□□□□ -1.49
SCN1A-210ENST00000635776 IL27Q8NEV9 243 aa5.75□□□□□ -1.49
SCN1A-210ENST00000635776 ARHGAP45Q92619 1136 aa5.75□□□□□ -1.49
SCN1A-210ENST00000635776 EDC4Q6P2E9 1401 aaKnown RBP5.75□□□□□ -1.49
SCN1A-210ENST00000635776 BACH2Q9BYV9 841 aa5.74□□□□□ -1.49
SCN1A-210ENST00000635776 DLC1Q96QB1 1528 aa5.74□□□□□ -1.49
SCN1A-210ENST00000635776 NFE2L2Q16236 605 aa5.74□□□□□ -1.49
SCN1A-210ENST00000635776 GAS2L2Q8NHY3 880 aa5.74□□□□□ -1.49
SCN1A-210ENST00000635776 KIDINS220Q9ULH0 1771 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms