RNA–Protein interactions for RNA: ENST00000623478.1

PCDHB4-202, Transcript of protocadherin beta 4, humanhuman

TSL 1 (best)

Gene PCDHB4, Length 1,206 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-202ENST00000623478 DHX57Q6P158 1386 aaKnown RBP30.59■■■□□ 2.49
PCDHB4-202ENST00000623478 SHPRHQ149N8 1683 aa30.58■■■□□ 2.49
PCDHB4-202ENST00000623478 RGS17Q9UGC6 210 aaPredicted RBP30.58■■■□□ 2.49
PCDHB4-202ENST00000623478 ORAI2Q96SN7 254 aa30.57■■■□□ 2.48
PCDHB4-202ENST00000623478 LRP6O75581 1613 aa30.56■■■□□ 2.48
PCDHB4-202ENST00000623478 SOCS7O14512 581 aa30.56■■■□□ 2.48
PCDHB4-202ENST00000623478 ADGRB1O14514 1584 aa30.56■■■□□ 2.48
PCDHB4-202ENST00000623478 SPATA31A6Q5VVP1 1343 aa30.52■■■□□ 2.48
PCDHB4-202ENST00000623478 SIRT1Q96EB6 747 aa30.51■■■□□ 2.47
PCDHB4-202ENST00000623478 NUTM2FA1L443 756 aa30.49■■■□□ 2.47
PCDHB4-202ENST00000623478 DLC1Q96QB1 1528 aa30.48■■■□□ 2.47
PCDHB4-202ENST00000623478 FMN2Q9NZ56 1722 aa30.48■■■□□ 2.47
PCDHB4-202ENST00000623478 PRAM1Q96QH2 718 aa30.48■■■□□ 2.47
PCDHB4-202ENST00000623478 SAFB2Q14151 953 aaKnown RBP eCLIP30.47■■■□□ 2.47
PCDHB4-202ENST00000623478 ESCO1Q5FWF5 840 aa30.47■■■□□ 2.47
PCDHB4-202ENST00000623478 LRRC59Q96AG4 307 aaKnown RBP30.47■■■□□ 2.47
PCDHB4-202ENST00000623478 STAC3Q96MF2 364 aa30.47■■■□□ 2.47
PCDHB4-202ENST00000623478 PNPLA6Q8IY17 1366 aa30.44■■■□□ 2.46
PCDHB4-202ENST00000623478 TRAK1Q9UPV9 953 aa30.44■■■□□ 2.46
PCDHB4-202ENST00000623478 SOS2Q07890 1332 aaPredicted RBP30.44■■■□□ 2.46
PCDHB4-202ENST00000623478 NUTM2BA6NNL0 878 aaPredicted RBP30.43■■■□□ 2.46
PCDHB4-202ENST00000623478 NUTM2EB1AL46 878 aaPredicted RBP30.43■■■□□ 2.46
PCDHB4-202ENST00000623478 NUTM2AQ8IVF1 878 aaPredicted RBP30.43■■■□□ 2.46
PCDHB4-202ENST00000623478 MEX3CQ5U5Q3 659 aaKnown RBP30.42■■■□□ 2.46
PCDHB4-202ENST00000623478 POTEAQ6S8J7 498 aa30.42■■■□□ 2.46
PCDHB4-202ENST00000623478 POGKQ9P215 609 aa30.41■■■□□ 2.46
PCDHB4-202ENST00000623478 PXDNQ92626 1479 aa30.38■■■□□ 2.45
PCDHB4-202ENST00000623478 FOXO3O43524 673 aa30.37■■■□□ 2.45
PCDHB4-202ENST00000623478 NPHP3Q7Z494 1330 aa30.37■■■□□ 2.45
PCDHB4-202ENST00000623478 XPCQ01831 940 aaPredicted RBP30.36■■■□□ 2.45
PCDHB4-202ENST00000623478 ADGRB2O60241 1585 aa30.36■■■□□ 2.45
PCDHB4-202ENST00000623478 RGPD8O14715 1765 aaPredicted RBP30.34■■■□□ 2.45
PCDHB4-202ENST00000623478 SIN3AQ96ST3 1273 aa30.34■■■□□ 2.45
PCDHB4-202ENST00000623478 ARHGEF28Q8N1W1 1705 aaKnown RBP30.33■■■□□ 2.45
PCDHB4-202ENST00000623478 KIF1AQ12756 1690 aa30.33■■■□□ 2.45
PCDHB4-202ENST00000623478 HIRIP3Q9BW71 556 aaPredicted RBP30.33■■■□□ 2.45
PCDHB4-202ENST00000623478 KIAA1210Q9ULL0 1709 aa30.33■■■□□ 2.45
PCDHB4-202ENST00000623478 MINK1Q8N4C8 1332 aaPredicted RBP30.31■■■□□ 2.44
PCDHB4-202ENST00000623478 USP32Q8NFA0 1604 aa30.31■■■□□ 2.44
PCDHB4-202ENST00000623478 COL22A1Q8NFW1 1626 aaPredicted RBP30.29■■■□□ 2.44
PCDHB4-202ENST00000623478 L3MBTL2Q969R5 705 aa30.28■■■□□ 2.44
PCDHB4-202ENST00000623478 TRIM26Q12899 539 aaPredicted RBP30.27■■■□□ 2.44
PCDHB4-202ENST00000623478 NEUROD1Q13562 356 aa30.26■■■□□ 2.43
PCDHB4-202ENST00000623478 NBPF1Q3BBV0 1214 aa30.26■■■□□ 2.43
PCDHB4-202ENST00000623478 ANKARQ7Z5J8 1434 aa30.26■■■□□ 2.43
PCDHB4-202ENST00000623478 PHF8Q9UPP1 1060 aa30.26■■■□□ 2.43
PCDHB4-202ENST00000623478 ADAMTS2O95450 1211 aa30.25■■■□□ 2.43
PCDHB4-202ENST00000623478 C8orf37Q96NL8 207 aa30.25■■■□□ 2.43
PCDHB4-202ENST00000623478 ZNF772Q68DY9 489 aaPredicted RBP30.24■■■□□ 2.43
PCDHB4-202ENST00000623478 AFF2P51816 1311 aa30.23■■■□□ 2.43
PCDHB4-202ENST00000623478 TULP4Q9NRJ4 1543 aa30.22■■■□□ 2.43
PCDHB4-202ENST00000623478 PRR36Q9H6K5 1346 aa30.21■■■□□ 2.43
PCDHB4-202ENST00000623478 WASLO00401 505 aaPredicted RBP30.2■■■□□ 2.43
PCDHB4-202ENST00000623478 KRT28Q7Z3Y7 464 aa30.2■■■□□ 2.43
PCDHB4-202ENST00000623478 EIF3AQ14152 1382 aaKnown RBP30.18■■■□□ 2.42
PCDHB4-202ENST00000623478 PMFBP1Q8TBY8 1022 aa30.18■■■□□ 2.42
PCDHB4-202ENST00000623478 SPATA31A3Q5VYP0 1347 aa30.18■■■□□ 2.42
PCDHB4-202ENST00000623478 TNS3Q68CZ2 1445 aa30.14■■■□□ 2.42
PCDHB4-202ENST00000623478 NGLY1Q96IV0 654 aa30.14■■■□□ 2.42
PCDHB4-202ENST00000623478 TRPM1Q7Z4N2 1603 aa30.13■■■□□ 2.41
PCDHB4-202ENST00000623478 ATP7BP35670 1465 aa30.12■■■□□ 2.41
PCDHB4-202ENST00000623478 PSME1Q06323 249 aa30.12■■■□□ 2.41
PCDHB4-202ENST00000623478 SBNO1A3KN83 1393 aa30.1■■■□□ 2.41
PCDHB4-202ENST00000623478 MARF1Q9Y4F3 1742 aaKnown RBP30.08■■■□□ 2.41
PCDHB4-202ENST00000623478 RXRBP28702 533 aa30.08■■■□□ 2.41
PCDHB4-202ENST00000623478 CDK19Q9BWU1 502 aa30.08■■■□□ 2.41
PCDHB4-202ENST00000623478 TRPM3Q9HCF6 1732 aaPredicted RBP30.08■■■□□ 2.41
PCDHB4-202ENST00000623478 ITSN1Q15811 1721 aa30.07■■■□□ 2.4
PCDHB4-202ENST00000623478 CENPJQ9HC77 1338 aaPredicted RBP30.06■■■□□ 2.4
PCDHB4-202ENST00000623478 NUDT16Q96DE0 195 aaKnown RBP30.06■■■□□ 2.4
PCDHB4-202ENST00000623478 LMOD2Q6P5Q4 547 aa30.05■■■□□ 2.4
PCDHB4-202ENST00000623478 QTRT2Q9H974 415 aaKnown RBP30.05■■■□□ 2.4
PCDHB4-202ENST00000623478 QRICH2Q9H0J4 1663 aa30.04■■■□□ 2.4
PCDHB4-202ENST00000623478 PLEKHG5O94827 1062 aa30.04■■■□□ 2.4
PCDHB4-202ENST00000623478 USP21Q9UK80 565 aa30.04■■■□□ 2.4
PCDHB4-202ENST00000623478 ROCK2O75116 1388 aaKnown RBP30.03■■■□□ 2.4
PCDHB4-202ENST00000623478 GPRASP1Q5JY77 1395 aa30.03■■■□□ 2.4
PCDHB4-202ENST00000623478 FNBP4Q8N3X1 1017 aaPredicted RBP30.03■■■□□ 2.4
PCDHB4-202ENST00000623478 CABLES1Q8TDN4 633 aa30.03■■■□□ 2.4
PCDHB4-202ENST00000623478 TOPAZ1Q8N9V7 1692 aa30.03■■■□□ 2.4
PCDHB4-202ENST00000623478 ARHGEF10O15013 1369 aa30.03■■■□□ 2.4
PCDHB4-202ENST00000623478 NBPF8Q3BBV2 869 aa30.02■■■□□ 2.4
PCDHB4-202ENST00000623478 NGDNQ8NEJ9 315 aaKnown RBP30.02■■■□□ 2.4
PCDHB4-202ENST00000623478 ABCA3Q99758 1704 aa30.02■■■□□ 2.4
PCDHB4-202ENST00000623478 ALS2Q96Q42 1657 aa30■■■□□ 2.39
PCDHB4-202ENST00000623478 CDK12Q9NYV4 1490 aaPredicted RBP29.99■■■□□ 2.39
PCDHB4-202ENST00000623478 TONSLQ96HA7 1378 aa29.99■■■□□ 2.39
PCDHB4-202ENST00000623478 RBM6P78332 1123 aaKnown RBP29.98■■■□□ 2.39
PCDHB4-202ENST00000623478 BCL9LQ86UU0 1499 aa29.98■■■□□ 2.39
PCDHB4-202ENST00000623478 HAP1P54257 671 aaPredicted RBP29.97■■■□□ 2.39
PCDHB4-202ENST00000623478 RGS12O14924 1447 aa29.96■■■□□ 2.39
PCDHB4-202ENST00000623478 ATRNO75882 1429 aa29.96■■■□□ 2.39
PCDHB4-202ENST00000623478 SRPK2P78362 688 aaKnown RBP29.95■■■□□ 2.39
PCDHB4-202ENST00000623478 TRPC5Q9UL62 973 aaPredicted RBP29.95■■■□□ 2.39
PCDHB4-202ENST00000623478 CCDC61Q9Y6R9 512 aa29.95■■■□□ 2.39
PCDHB4-202ENST00000623478 CABP2Q9NPB3 220 aa29.94■■■□□ 2.38
PCDHB4-202ENST00000623478 POLR3AO14802 1390 aaPredicted RBP29.93■■■□□ 2.38
PCDHB4-202ENST00000623478 PAK3O75914 559 aaPredicted RBP29.93■■■□□ 2.38
PCDHB4-202ENST00000623478 SLIT2O94813 1529 aa29.92■■■□□ 2.38
PCDHB4-202ENST00000623478 ACEP12821 1306 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms