RNA–Protein interactions for RNA: ENST00000620337.4

LINC00221-203, long intergenic non-protein coding RNA 221, humanhuman

TSL 5

Gene LINC00221, Length 484 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-203ENST00000620337 NHSL1Q5SYE7 1610 aa24.76■■□□□ 1.55
LINC00221-203ENST00000620337 DCAF11Q8TEB1 546 aa24.76■■□□□ 1.55
LINC00221-203ENST00000620337 RGS17Q9UGC6 210 aaPredicted RBP24.76■■□□□ 1.55
LINC00221-203ENST00000620337 LRRC59Q96AG4 307 aaKnown RBP24.75■■□□□ 1.55
LINC00221-203ENST00000620337 KDM2AQ9Y2K7 1162 aa24.74■■□□□ 1.55
LINC00221-203ENST00000620337 SHPRHQ149N8 1683 aa24.74■■□□□ 1.55
LINC00221-203ENST00000620337 PLEKHH1Q9ULM0 1364 aa24.73■■□□□ 1.55
LINC00221-203ENST00000620337 ORAI2Q96SN7 254 aa24.73■■□□□ 1.55
LINC00221-203ENST00000620337 DDX17Q92841 729 aaKnown RBP24.71■■□□□ 1.55
LINC00221-203ENST00000620337 SOS2Q07890 1332 aaPredicted RBP24.67■■□□□ 1.54
LINC00221-203ENST00000620337 ESCO1Q5FWF5 840 aa24.67■■□□□ 1.54
LINC00221-203ENST00000620337 MEX3CQ5U5Q3 659 aaKnown RBP24.67■■□□□ 1.54
LINC00221-203ENST00000620337 LRP6O75581 1613 aa24.67■■□□□ 1.54
LINC00221-203ENST00000620337 ADGRB1O14514 1584 aa24.67■■□□□ 1.54
LINC00221-203ENST00000620337 DLC1Q96QB1 1528 aa24.66■■□□□ 1.54
LINC00221-203ENST00000620337 PRAM1Q96QH2 718 aa24.66■■□□□ 1.54
LINC00221-203ENST00000620337 POGKQ9P215 609 aa24.64■■□□□ 1.54
LINC00221-203ENST00000620337 PNPLA6Q8IY17 1366 aa24.64■■□□□ 1.53
LINC00221-203ENST00000620337 NPHP3Q7Z494 1330 aa24.63■■□□□ 1.53
LINC00221-203ENST00000620337 NUTM2BA6NNL0 878 aaPredicted RBP24.63■■□□□ 1.53
LINC00221-203ENST00000620337 NUTM2EB1AL46 878 aaPredicted RBP24.63■■□□□ 1.53
LINC00221-203ENST00000620337 POTEAQ6S8J7 498 aa24.63■■□□□ 1.53
LINC00221-203ENST00000620337 NUTM2AQ8IVF1 878 aaPredicted RBP24.63■■□□□ 1.53
LINC00221-203ENST00000620337 NUTM2FA1L443 756 aa24.62■■□□□ 1.53
LINC00221-203ENST00000620337 TRAK1Q9UPV9 953 aa24.61■■□□□ 1.53
LINC00221-203ENST00000620337 FMN2Q9NZ56 1722 aa24.61■■□□□ 1.53
LINC00221-203ENST00000620337 SAFB2Q14151 953 aaKnown RBP eCLIP24.6■■□□□ 1.53
LINC00221-203ENST00000620337 FOXO3O43524 673 aa24.59■■□□□ 1.53
LINC00221-203ENST00000620337 ZNF772Q68DY9 489 aaPredicted RBP24.59■■□□□ 1.53
LINC00221-203ENST00000620337 PXDNQ92626 1479 aa24.55■■□□□ 1.52
LINC00221-203ENST00000620337 KIF1AQ12756 1690 aa24.53■■□□□ 1.52
LINC00221-203ENST00000620337 ADGRB2O60241 1585 aa24.53■■□□□ 1.52
LINC00221-203ENST00000620337 XPCQ01831 940 aaPredicted RBP24.52■■□□□ 1.52
LINC00221-203ENST00000620337 PHF8Q9UPP1 1060 aa24.52■■□□□ 1.52
LINC00221-203ENST00000620337 ANKARQ7Z5J8 1434 aa24.52■■□□□ 1.52
LINC00221-203ENST00000620337 KIAA1210Q9ULL0 1709 aa24.5■■□□□ 1.51
LINC00221-203ENST00000620337 MINK1Q8N4C8 1332 aaPredicted RBP24.5■■□□□ 1.51
LINC00221-203ENST00000620337 EIF3AQ14152 1382 aaKnown RBP24.5■■□□□ 1.51
LINC00221-203ENST00000620337 C8orf37Q96NL8 207 aa24.49■■□□□ 1.51
LINC00221-203ENST00000620337 HIRIP3Q9BW71 556 aaPredicted RBP24.49■■□□□ 1.51
LINC00221-203ENST00000620337 AFF2P51816 1311 aa24.49■■□□□ 1.51
LINC00221-203ENST00000620337 ADAMTS2O95450 1211 aa24.48■■□□□ 1.51
LINC00221-203ENST00000620337 COL22A1Q8NFW1 1626 aaPredicted RBP24.48■■□□□ 1.51
LINC00221-203ENST00000620337 KRT28Q7Z3Y7 464 aa24.47■■□□□ 1.51
LINC00221-203ENST00000620337 RGPD8O14715 1765 aaPredicted RBP24.47■■□□□ 1.51
LINC00221-203ENST00000620337 WASLO00401 505 aaPredicted RBP24.46■■□□□ 1.51
LINC00221-203ENST00000620337 PSME1Q06323 249 aa24.46■■□□□ 1.51
LINC00221-203ENST00000620337 L3MBTL2Q969R5 705 aa24.46■■□□□ 1.51
LINC00221-203ENST00000620337 SIN3AQ96ST3 1273 aa24.46■■□□□ 1.51
LINC00221-203ENST00000620337 SPATA31A3Q5VYP0 1347 aa24.45■■□□□ 1.5
LINC00221-203ENST00000620337 ARHGEF28Q8N1W1 1705 aaKnown RBP24.45■■□□□ 1.5
LINC00221-203ENST00000620337 TRIM26Q12899 539 aaPredicted RBP24.45■■□□□ 1.5
LINC00221-203ENST00000620337 NGLY1Q96IV0 654 aa24.45■■□□□ 1.5
LINC00221-203ENST00000620337 NBPF1Q3BBV0 1214 aa24.44■■□□□ 1.5
LINC00221-203ENST00000620337 RXRBP28702 533 aa24.43■■□□□ 1.5
LINC00221-203ENST00000620337 USP32Q8NFA0 1604 aa24.43■■□□□ 1.5
LINC00221-203ENST00000620337 TULP4Q9NRJ4 1543 aa24.42■■□□□ 1.5
LINC00221-203ENST00000620337 NEUROD1Q13562 356 aa24.42■■□□□ 1.5
LINC00221-203ENST00000620337 SBNO1A3KN83 1393 aa24.41■■□□□ 1.5
LINC00221-203ENST00000620337 PMFBP1Q8TBY8 1022 aa24.4■■□□□ 1.5
LINC00221-203ENST00000620337 PRR36Q9H6K5 1346 aa24.39■■□□□ 1.5
LINC00221-203ENST00000620337 TNS3Q68CZ2 1445 aa24.38■■□□□ 1.49
LINC00221-203ENST00000620337 FNBP4Q8N3X1 1017 aaPredicted RBP24.38■■□□□ 1.49
LINC00221-203ENST00000620337 QTRT2Q9H974 415 aaKnown RBP24.38■■□□□ 1.49
LINC00221-203ENST00000620337 ARHGEF10O15013 1369 aa24.36■■□□□ 1.49
LINC00221-203ENST00000620337 GPRASP1Q5JY77 1395 aa24.36■■□□□ 1.49
LINC00221-203ENST00000620337 CDK12Q9NYV4 1490 aaPredicted RBP24.35■■□□□ 1.49
LINC00221-203ENST00000620337 RBM6P78332 1123 aaKnown RBP24.35■■□□□ 1.49
LINC00221-203ENST00000620337 USP21Q9UK80 565 aa24.35■■□□□ 1.49
LINC00221-203ENST00000620337 NUDT16Q96DE0 195 aaKnown RBP24.34■■□□□ 1.49
LINC00221-203ENST00000620337 CDK19Q9BWU1 502 aa24.34■■□□□ 1.49
LINC00221-203ENST00000620337 NGDNQ8NEJ9 315 aaKnown RBP24.33■■□□□ 1.49
LINC00221-203ENST00000620337 CENPJQ9HC77 1338 aaPredicted RBP24.33■■□□□ 1.48
LINC00221-203ENST00000620337 LMOD2Q6P5Q4 547 aa24.32■■□□□ 1.48
LINC00221-203ENST00000620337 TRPC5Q9UL62 973 aaPredicted RBP24.32■■□□□ 1.48
LINC00221-203ENST00000620337 ATP7BP35670 1465 aa24.32■■□□□ 1.48
LINC00221-203ENST00000620337 MARF1Q9Y4F3 1742 aaKnown RBP24.3■■□□□ 1.48
LINC00221-203ENST00000620337 HAP1P54257 671 aaPredicted RBP24.3■■□□□ 1.48
LINC00221-203ENST00000620337 ITSN1Q15811 1721 aa24.3■■□□□ 1.48
LINC00221-203ENST00000620337 CCDC61Q9Y6R9 512 aa24.29■■□□□ 1.48
LINC00221-203ENST00000620337 TRPM1Q7Z4N2 1603 aa24.28■■□□□ 1.48
LINC00221-203ENST00000620337 CABLES1Q8TDN4 633 aa24.27■■□□□ 1.48
LINC00221-203ENST00000620337 ROCK2O75116 1388 aaKnown RBP24.27■■□□□ 1.48
LINC00221-203ENST00000620337 TRPM3Q9HCF6 1732 aaPredicted RBP24.27■■□□□ 1.48
LINC00221-203ENST00000620337 BCL9LQ86UU0 1499 aa24.26■■□□□ 1.47
LINC00221-203ENST00000620337 ATRNO75882 1429 aa24.26■■□□□ 1.47
LINC00221-203ENST00000620337 PLEKHG3A1L390 1219 aa24.24■■□□□ 1.47
LINC00221-203ENST00000620337 SRPK2P78362 688 aaKnown RBP24.24■■□□□ 1.47
LINC00221-203ENST00000620337 TONSLQ96HA7 1378 aa24.24■■□□□ 1.47
LINC00221-203ENST00000620337 PLEKHG5O94827 1062 aa24.23■■□□□ 1.47
LINC00221-203ENST00000620337 POLR3AO14802 1390 aaPredicted RBP24.23■■□□□ 1.47
LINC00221-203ENST00000620337 ALS2Q96Q42 1657 aa24.22■■□□□ 1.47
LINC00221-203ENST00000620337 SLIT2O94813 1529 aa24.22■■□□□ 1.47
LINC00221-203ENST00000620337 RGS12O14924 1447 aa24.22■■□□□ 1.47
LINC00221-203ENST00000620337 PAK3O75914 559 aaPredicted RBP24.22■■□□□ 1.47
LINC00221-203ENST00000620337 NBPF8Q3BBV2 869 aa24.22■■□□□ 1.47
LINC00221-203ENST00000620337 UNC5CLQ8IV45 518 aa24.22■■□□□ 1.47
LINC00221-203ENST00000620337 TOPAZ1Q8N9V7 1692 aa24.21■■□□□ 1.47
LINC00221-203ENST00000620337 QRICH2Q9H0J4 1663 aa24.21■■□□□ 1.47
LINC00221-203ENST00000620337 ACEP12821 1306 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms