RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 STRCP1A6NGW2 1772 aa21.16■□□□□ 0.98
CBWD1-225ENST00000616944 AMOTL2Q9Y2J4 779 aa21.16■□□□□ 0.98
CBWD1-225ENST00000616944 WAPLQ7Z5K2 1190 aa21.14■□□□□ 0.97
CBWD1-225ENST00000616944 POGKQ9P215 609 aa21.13■□□□□ 0.97
CBWD1-225ENST00000616944 SAFB2Q14151 953 aaKnown RBP eCLIP21.11■□□□□ 0.97
CBWD1-225ENST00000616944 NALCNQ8IZF0 1738 aa21.11■□□□□ 0.97
CBWD1-225ENST00000616944 KCNA6P17658 529 aa21.11■□□□□ 0.97
CBWD1-225ENST00000616944 DDX10Q13206 875 aaKnown RBP21.11■□□□□ 0.97
CBWD1-225ENST00000616944 NKTRP30414 1462 aaKnown RBP21.1■□□□□ 0.97
CBWD1-225ENST00000616944 DIEXFQ68CQ4 756 aaKnown RBP21.1■□□□□ 0.97
CBWD1-225ENST00000616944 CDCA8Q53HL2 280 aa21.09■□□□□ 0.97
CBWD1-225ENST00000616944 DMRT2Q9Y5R5 561 aa21.09■□□□□ 0.97
CBWD1-225ENST00000616944 EVC2Q86UK5 1308 aa21.08■□□□□ 0.97
CBWD1-225ENST00000616944 MINK1Q8N4C8 1332 aaPredicted RBP21.08■□□□□ 0.97
CBWD1-225ENST00000616944 PUS7Q96PZ0 661 aaKnown RBP21.07■□□□□ 0.96
CBWD1-225ENST00000616944 POLR3GLQ9BT43 218 aa21.04■□□□□ 0.96
CBWD1-225ENST00000616944 XIRP1Q702N8 1843 aaKnown RBP21.03■□□□□ 0.96
CBWD1-225ENST00000616944 TOPAZ1Q8N9V7 1692 aa21.03■□□□□ 0.96
CBWD1-225ENST00000616944 CDC42BPGQ6DT37 1551 aa21.02■□□□□ 0.96
CBWD1-225ENST00000616944 FMN2Q9NZ56 1722 aa21.02■□□□□ 0.96
CBWD1-225ENST00000616944 USP32Q8NFA0 1604 aa21.01■□□□□ 0.95
CBWD1-225ENST00000616944 LTBP4Q8N2S1 1624 aa21.01■□□□□ 0.95
CBWD1-225ENST00000616944 WASLO00401 505 aaPredicted RBP21■□□□□ 0.95
CBWD1-225ENST00000616944 ATP7BP35670 1465 aa21■□□□□ 0.95
CBWD1-225ENST00000616944 ADGRL3Q9HAR2 1447 aa21■□□□□ 0.95
CBWD1-225ENST00000616944 CDK19Q9BWU1 502 aa21■□□□□ 0.95
CBWD1-225ENST00000616944 RGPD8O14715 1765 aaPredicted RBP20.99■□□□□ 0.95
CBWD1-225ENST00000616944 ATAD2Q6PL18 1390 aa20.99■□□□□ 0.95
CBWD1-225ENST00000616944 CABP2Q9NPB3 220 aa20.99■□□□□ 0.95
CBWD1-225ENST00000616944 ITSN1Q15811 1721 aa20.99■□□□□ 0.95
CBWD1-225ENST00000616944 ZNF335Q9H4Z2 1342 aaPredicted RBP20.98■□□□□ 0.95
CBWD1-225ENST00000616944 NINLQ9Y2I6 1382 aa20.97■□□□□ 0.95
CBWD1-225ENST00000616944 SRPK2P78362 688 aaKnown RBP20.96■□□□□ 0.95
CBWD1-225ENST00000616944 NCOA3Q9Y6Q9 1424 aa20.95■□□□□ 0.94
CBWD1-225ENST00000616944 AKAP12Q02952 1782 aa20.94■□□□□ 0.94
CBWD1-225ENST00000616944 CD163L1Q9NR16 1453 aa20.94■□□□□ 0.94
CBWD1-225ENST00000616944 PRR36Q9H6K5 1346 aa20.93■□□□□ 0.94
CBWD1-225ENST00000616944 PER1O15534 1290 aaPredicted RBP20.93■□□□□ 0.94
CBWD1-225ENST00000616944 PANK3Q9H999 370 aa20.93■□□□□ 0.94
CBWD1-225ENST00000616944 LRRC7Q96NW7 1537 aa20.92■□□□□ 0.94
CBWD1-225ENST00000616944 ANKARQ7Z5J8 1434 aa20.91■□□□□ 0.94
CBWD1-225ENST00000616944 PROSER2Q86WR7 435 aaPredicted RBP20.91■□□□□ 0.94
CBWD1-225ENST00000616944 RBM33Q96EV2 1170 aaKnown RBP20.91■□□□□ 0.94
CBWD1-225ENST00000616944 SLC12A5Q9H2X9 1139 aa20.91■□□□□ 0.94
CBWD1-225ENST00000616944 TMEM94Q12767 1356 aa20.91■□□□□ 0.94
CBWD1-225ENST00000616944 MON2Q7Z3U7 1717 aa20.91■□□□□ 0.94
CBWD1-225ENST00000616944 ANKRD36BQ8N2N9 1353 aa20.9■□□□□ 0.94
CBWD1-225ENST00000616944 PPIP5K1Q6PFW1 1433 aa20.89■□□□□ 0.94
CBWD1-225ENST00000616944 NUDT16Q96DE0 195 aaKnown RBP20.89■□□□□ 0.93
CBWD1-225ENST00000616944 DCCP43146 1447 aa20.89■□□□□ 0.93
CBWD1-225ENST00000616944 A0A1W2PP64 1363 aa20.87■□□□□ 0.93
CBWD1-225ENST00000616944 TMC1Q8TDI8 760 aa20.87■□□□□ 0.93
CBWD1-225ENST00000616944 CCDC61Q9Y6R9 512 aa20.86■□□□□ 0.93
CBWD1-225ENST00000616944 CPSF1Q10570 1443 aaKnown RBP20.86■□□□□ 0.93
CBWD1-225ENST00000616944 CARD14Q9BXL6 1004 aa20.86■□□□□ 0.93
CBWD1-225ENST00000616944 NRKQ7Z2Y5 1582 aa20.85■□□□□ 0.93
CBWD1-225ENST00000616944 CABP1Q9NZU7 370 aa20.85■□□□□ 0.93
CBWD1-225ENST00000616944 MIER1Q8N108 512 aa20.84■□□□□ 0.93
CBWD1-225ENST00000616944 C19orf44Q9H6X5 657 aa20.83■□□□□ 0.93
CBWD1-225ENST00000616944 KIF20BQ96Q89 1820 aa20.82■□□□□ 0.92
CBWD1-225ENST00000616944 NPC1L1Q9UHC9 1359 aa20.82■□□□□ 0.92
CBWD1-225ENST00000616944 NSD3Q9BZ95 1437 aa20.82■□□□□ 0.92
CBWD1-225ENST00000616944 ANKRD26Q9UPS8 1709 aa20.82■□□□□ 0.92
CBWD1-225ENST00000616944 PLEKHG3A1L390 1219 aa20.81■□□□□ 0.92
CBWD1-225ENST00000616944 NUTM2FA1L443 756 aa20.81■□□□□ 0.92
CBWD1-225ENST00000616944 AMER1Q5JTC6 1135 aaPredicted RBP20.81■□□□□ 0.92
CBWD1-225ENST00000616944 C14orf37Q86TY3 774 aa20.81■□□□□ 0.92
CBWD1-225ENST00000616944 CERKQ8TCT0 537 aa20.81■□□□□ 0.92
CBWD1-225ENST00000616944 TERF2IPQ9NYB0 399 aa20.81■□□□□ 0.92
CBWD1-225ENST00000616944 ANP32CO43423 234 aa20.8■□□□□ 0.92
CBWD1-225ENST00000616944 PRKRIP1Q9H875 184 aaPredicted RBP20.8■□□□□ 0.92
CBWD1-225ENST00000616944 MST1RQ04912 1400 aa20.79■□□□□ 0.92
CBWD1-225ENST00000616944 POLR3AO14802 1390 aaPredicted RBP20.79■□□□□ 0.92
CBWD1-225ENST00000616944 KNSTRNQ9Y448 316 aa20.79■□□□□ 0.92
CBWD1-225ENST00000616944 MSH6P52701 1360 aa20.79■□□□□ 0.92
CBWD1-225ENST00000616944 KIF1AQ12756 1690 aa20.78■□□□□ 0.92
CBWD1-225ENST00000616944 IQSEC2Q5JU85 1478 aa20.77■□□□□ 0.92
CBWD1-225ENST00000616944 C1orf167Q5SNV9 1468 aa20.77■□□□□ 0.92
CBWD1-225ENST00000616944 KTN1Q86UP2 1357 aaKnown RBP20.77■□□□□ 0.92
CBWD1-225ENST00000616944 PARD3Q8TEW0 1356 aa20.77■□□□□ 0.92
CBWD1-225ENST00000616944 HDGFL2Q7Z4V5 671 aaPredicted RBP20.77■□□□□ 0.92
CBWD1-225ENST00000616944 EDC4Q6P2E9 1401 aaKnown RBP20.77■□□□□ 0.91
CBWD1-225ENST00000616944 ACEP12821 1306 aa20.75■□□□□ 0.91
CBWD1-225ENST00000616944 USP6P35125 1406 aa20.74■□□□□ 0.91
CBWD1-225ENST00000616944 SSH2Q76I76 1423 aa20.74■□□□□ 0.91
CBWD1-225ENST00000616944 CADPS2Q86UW7 1296 aa20.73■□□□□ 0.91
CBWD1-225ENST00000616944 CGNL1Q0VF96 1302 aa20.72■□□□□ 0.91
CBWD1-225ENST00000616944 ATF3P18847 181 aa20.72■□□□□ 0.91
CBWD1-225ENST00000616944 ZNF692Q9BU19 519 aaPredicted RBP20.72■□□□□ 0.91
CBWD1-225ENST00000616944 NSD2O96028 1365 aa20.72■□□□□ 0.91
CBWD1-225ENST00000616944 RALBP1Q15311 655 aa20.71■□□□□ 0.91
CBWD1-225ENST00000616944 CC2D1BQ5T0F9 858 aaKnown RBP20.71■□□□□ 0.91
CBWD1-225ENST00000616944 PMFBP1Q8TBY8 1022 aa20.71■□□□□ 0.91
CBWD1-225ENST00000616944 USP54Q70EL1 1684 aa20.7■□□□□ 0.9
CBWD1-225ENST00000616944 PHF8Q9UPP1 1060 aa20.7■□□□□ 0.9
CBWD1-225ENST00000616944 TRPM3Q9HCF6 1732 aaPredicted RBP20.69■□□□□ 0.9
CBWD1-225ENST00000616944 PIK3C2AO00443 1686 aa20.69■□□□□ 0.9
CBWD1-225ENST00000616944 MARF1Q9Y4F3 1742 aaKnown RBP20.68■□□□□ 0.9
CBWD1-225ENST00000616944 ESCO1Q5FWF5 840 aa20.67■□□□□ 0.9
CBWD1-225ENST00000616944 ORAI2Q96SN7 254 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms