RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 MFAP1P55081 439 aaKnown RBP17.71■□□□□ 0.43
SSBP2-220ENST00000615665 SPRYD3Q8NCJ5 442 aa17.71■□□□□ 0.43
SSBP2-220ENST00000615665 KDM5DQ9BY66 1539 aa17.71■□□□□ 0.42
SSBP2-220ENST00000615665 ELL2O00472 640 aaPredicted RBP17.7■□□□□ 0.42
SSBP2-220ENST00000615665 WDR63Q8IWG1 891 aa17.7■□□□□ 0.42
SSBP2-220ENST00000615665 PAK3O75914 559 aaPredicted RBP17.7■□□□□ 0.42
SSBP2-220ENST00000615665 USP35Q9P2H5 1018 aa17.7■□□□□ 0.42
SSBP2-220ENST00000615665 ATAD2Q6PL18 1390 aa17.69■□□□□ 0.42
SSBP2-220ENST00000615665 CDK19Q9BWU1 502 aa17.68■□□□□ 0.42
SSBP2-220ENST00000615665 IDI1Q13907 227 aa17.68■□□□□ 0.42
SSBP2-220ENST00000615665 NGDNQ8NEJ9 315 aaKnown RBP17.68■□□□□ 0.42
SSBP2-220ENST00000615665 ATP7AQ04656 1500 aa17.68■□□□□ 0.42
SSBP2-220ENST00000615665 NINLQ9Y2I6 1382 aa17.68■□□□□ 0.42
SSBP2-220ENST00000615665 LMOD2Q6P5Q4 547 aa17.68■□□□□ 0.42
SSBP2-220ENST00000615665 GOLGA6L22H0YM25 854 aa17.67■□□□□ 0.42
SSBP2-220ENST00000615665 CHD1O14646 1710 aa17.67■□□□□ 0.42
SSBP2-220ENST00000615665 CABP1Q9NZU7 370 aa17.67■□□□□ 0.42
SSBP2-220ENST00000615665 HMOX1P09601 288 aa17.67■□□□□ 0.42
SSBP2-220ENST00000615665 KIF16BQ96L93 1317 aa17.67■□□□□ 0.42
SSBP2-220ENST00000615665 CROCC2H7BZ55 1655 aa17.67■□□□□ 0.42
SSBP2-220ENST00000615665 NKTRP30414 1462 aaKnown RBP17.67■□□□□ 0.42
SSBP2-220ENST00000615665 TRHP20396 242 aaPredicted RBP17.66■□□□□ 0.42
SSBP2-220ENST00000615665 EXOSC9Q06265 439 aaKnown RBP17.65■□□□□ 0.42
SSBP2-220ENST00000615665 APBB1O00213 710 aa17.64■□□□□ 0.42
SSBP2-220ENST00000615665 TSR2Q969E8 191 aaKnown RBP17.64■□□□□ 0.42
SSBP2-220ENST00000615665 AMPHP49418 695 aa17.63■□□□□ 0.41
SSBP2-220ENST00000615665 CFAP44Q96MT7 982 aa17.63■□□□□ 0.41
SSBP2-220ENST00000615665 UHRF1BP1LA0JNW5 1464 aa17.63■□□□□ 0.41
SSBP2-220ENST00000615665 PRKAR2BP31323 418 aa17.62■□□□□ 0.41
SSBP2-220ENST00000615665 RNF123Q5XPI4 1314 aa17.62■□□□□ 0.41
SSBP2-220ENST00000615665 GNAI1P63096 354 aa17.62■□□□□ 0.41
SSBP2-220ENST00000615665 PIK3C2GO75747 1445 aa17.62■□□□□ 0.41
SSBP2-220ENST00000615665 SKAP1Q86WV1 359 aa17.61■□□□□ 0.41
SSBP2-220ENST00000615665 STK31Q9BXU1 1019 aa17.6■□□□□ 0.41
SSBP2-220ENST00000615665 PLA2R1Q13018 1463 aa17.6■□□□□ 0.41
SSBP2-220ENST00000615665 ABCC1P33527 1531 aa17.6■□□□□ 0.41
SSBP2-220ENST00000615665 CT47B1P0C2W7 299 aaPredicted RBP17.6■□□□□ 0.41
SSBP2-220ENST00000615665 ANKRD45Q5TZF3 282 aa17.6■□□□□ 0.41
SSBP2-220ENST00000615665 TXNDC2Q86VQ3 553 aa17.6■□□□□ 0.41
SSBP2-220ENST00000615665 FBXO31Q5XUX0 539 aaPredicted RBP17.59■□□□□ 0.41
SSBP2-220ENST00000615665 PLEKHH1Q9ULM0 1364 aa17.59■□□□□ 0.41
SSBP2-220ENST00000615665 CARD14Q9BXL6 1004 aa17.59■□□□□ 0.41
SSBP2-220ENST00000615665 BCORL1Q5H9F3 1711 aa17.58■□□□□ 0.4
SSBP2-220ENST00000615665 ERCC6L2Q5T890 1561 aa17.58■□□□□ 0.4
SSBP2-220ENST00000615665 ATP10AO60312 1499 aa17.58■□□□□ 0.4
SSBP2-220ENST00000615665 NSD2O96028 1365 aa17.58■□□□□ 0.4
SSBP2-220ENST00000615665 PDZRN3Q9UPQ7 1066 aa17.57■□□□□ 0.4
SSBP2-220ENST00000615665 TMPOP42166 694 aaKnown RBP17.57■□□□□ 0.4
SSBP2-220ENST00000615665 RARSP54136 660 aaKnown RBP17.57■□□□□ 0.4
SSBP2-220ENST00000615665 API5Q9BZZ5 524 aaKnown RBP17.57■□□□□ 0.4
SSBP2-220ENST00000615665 SLC4A10Q6U841 1118 aa17.57■□□□□ 0.4
SSBP2-220ENST00000615665 ZCCHC11Q5TAX3 1644 aaKnown RBP17.57■□□□□ 0.4
SSBP2-220ENST00000615665 NPC1L1Q9UHC9 1359 aa17.56■□□□□ 0.4
SSBP2-220ENST00000615665 NAP1L5Q96NT1 182 aaPredicted RBP17.56■□□□□ 0.4
SSBP2-220ENST00000615665 PLXNC1O60486 1568 aa17.55■□□□□ 0.4
SSBP2-220ENST00000615665 HMMRO75330 724 aa17.55■□□□□ 0.4
SSBP2-220ENST00000615665 INSRP06213 1382 aa17.55■□□□□ 0.4
SSBP2-220ENST00000615665 MVPQ14764 893 aaKnown RBP17.55■□□□□ 0.4
SSBP2-220ENST00000615665 NCLP19338 710 aaKnown RBP17.55■□□□□ 0.4
SSBP2-220ENST00000615665 POLR3AO14802 1390 aaPredicted RBP17.55■□□□□ 0.4
SSBP2-220ENST00000615665 BLMP54132 1417 aaPredicted RBP17.54■□□□□ 0.4
SSBP2-220ENST00000615665 LTV1Q96GA3 475 aaPredicted RBP17.54■□□□□ 0.4
SSBP2-220ENST00000615665 WAPLQ7Z5K2 1190 aa17.54■□□□□ 0.4
SSBP2-220ENST00000615665 NOB1Q9ULX3 412 aaKnown RBP17.54■□□□□ 0.4
SSBP2-220ENST00000615665 OS9Q13438 667 aaPredicted RBP17.54■□□□□ 0.4
SSBP2-220ENST00000615665 CDC42BPBQ9Y5S2 1711 aa17.53■□□□□ 0.4
SSBP2-220ENST00000615665 FCHSD2O94868 740 aa17.53■□□□□ 0.4
SSBP2-220ENST00000615665 ATF7IPQ6VMQ6 1270 aa17.53■□□□□ 0.4
SSBP2-220ENST00000615665 LNPKQ9C0E8 428 aa17.53■□□□□ 0.4
SSBP2-220ENST00000615665 ANKRD36BQ8N2N9 1353 aa17.53■□□□□ 0.4
SSBP2-220ENST00000615665 IQGAP3Q86VI3 1631 aa17.53■□□□□ 0.4
SSBP2-220ENST00000615665 TRPM2O94759 1503 aa17.52■□□□□ 0.4
SSBP2-220ENST00000615665 PRDM15P57071 1507 aaPredicted RBP17.52■□□□□ 0.4
SSBP2-220ENST00000615665 ZMYM4Q5VZL5 1548 aa17.52■□□□□ 0.4
SSBP2-220ENST00000615665 L1TD1Q5T7N2 865 aaKnown RBP17.52■□□□□ 0.39
SSBP2-220ENST00000615665 UNC13BO14795 1591 aa17.51■□□□□ 0.39
SSBP2-220ENST00000615665 TRIM44Q96DX7 344 aaPredicted RBP17.51■□□□□ 0.39
SSBP2-220ENST00000615665 GSE1Q14687 1217 aa17.5■□□□□ 0.39
SSBP2-220ENST00000615665 NFKBIBQ15653 356 aa17.5■□□□□ 0.39
SSBP2-220ENST00000615665 TPRNQ4KMQ1 711 aa17.5■□□□□ 0.39
SSBP2-220ENST00000615665 ZNF692Q9BU19 519 aaPredicted RBP17.5■□□□□ 0.39
SSBP2-220ENST00000615665 MAGI2Q86UL8 1455 aa17.5■□□□□ 0.39
SSBP2-220ENST00000615665 PUS7Q96PZ0 661 aaKnown RBP17.49■□□□□ 0.39
SSBP2-220ENST00000615665 MCCP23508 829 aa17.49■□□□□ 0.39
SSBP2-220ENST00000615665 GBP4Q96PP9 640 aa17.49■□□□□ 0.39
SSBP2-220ENST00000615665 ABCC11Q96J66 1382 aa17.49■□□□□ 0.39
SSBP2-220ENST00000615665 CCDC61Q9Y6R9 512 aa17.48■□□□□ 0.39
SSBP2-220ENST00000615665 TRPM1Q7Z4N2 1603 aa17.48■□□□□ 0.39
SSBP2-220ENST00000615665 TWISTNBQ3B726 338 aaPredicted RBP17.48■□□□□ 0.39
SSBP2-220ENST00000615665 NUDT16Q96DE0 195 aaKnown RBP17.48■□□□□ 0.39
SSBP2-220ENST00000615665 C22orf23Q9BZE7 217 aa17.47■□□□□ 0.39
SSBP2-220ENST00000615665 PTPRTO14522 1441 aa17.47■□□□□ 0.39
SSBP2-220ENST00000615665 CHMP4AQ9BY43 222 aa17.47■□□□□ 0.39
SSBP2-220ENST00000615665 GZF1Q9H116 711 aaPredicted RBP17.47■□□□□ 0.39
SSBP2-220ENST00000615665 POGZQ7Z3K3 1410 aa17.46■□□□□ 0.39
SSBP2-220ENST00000615665 NFE2L2Q16236 605 aa17.46■□□□□ 0.39
SSBP2-220ENST00000615665 PPP6R1Q9UPN7 881 aa17.46■□□□□ 0.39
SSBP2-220ENST00000615665 ZFYVE16Q7Z3T8 1539 aa17.46■□□□□ 0.39
SSBP2-220ENST00000615665 SSH1Q8WYL5 1049 aa17.46■□□□□ 0.39
SSBP2-220ENST00000615665 RRS1Q15050 365 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms