RNA–Protein interactions for RNA: ENST00000613355.4

CBWD1-221, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-221ENST00000613355 C1orf167Q5SNV9 1468 aa17.78■□□□□ 0.44
CBWD1-221ENST00000613355 LRRC59Q96AG4 307 aaKnown RBP17.77■□□□□ 0.44
CBWD1-221ENST00000613355 DLC1Q96QB1 1528 aa17.77■□□□□ 0.43
CBWD1-221ENST00000613355 SPATA31A6Q5VVP1 1343 aa17.76■□□□□ 0.43
CBWD1-221ENST00000613355 NHSL1Q5SYE7 1610 aa17.76■□□□□ 0.43
CBWD1-221ENST00000613355 ESCO1Q5FWF5 840 aa17.75■□□□□ 0.43
CBWD1-221ENST00000613355 PRAM1Q96QH2 718 aa17.75■□□□□ 0.43
CBWD1-221ENST00000613355 TRAK1Q9UPV9 953 aa17.75■□□□□ 0.43
CBWD1-221ENST00000613355 NEUROD1Q13562 356 aa17.74■□□□□ 0.43
CBWD1-221ENST00000613355 MEX3CQ5U5Q3 659 aaKnown RBP17.74■□□□□ 0.43
CBWD1-221ENST00000613355 KIAA1210Q9ULL0 1709 aa17.74■□□□□ 0.43
CBWD1-221ENST00000613355 SHPRHQ149N8 1683 aa17.74■□□□□ 0.43
CBWD1-221ENST00000613355 SAFB2Q14151 953 aaKnown RBP eCLIP17.73■□□□□ 0.43
CBWD1-221ENST00000613355 EIF3AQ14152 1382 aaKnown RBP17.73■□□□□ 0.43
CBWD1-221ENST00000613355 NPHP3Q7Z494 1330 aa17.73■□□□□ 0.43
CBWD1-221ENST00000613355 ADGRB1O14514 1584 aa17.72■□□□□ 0.43
CBWD1-221ENST00000613355 PLEKHH1Q9ULM0 1364 aa17.72■□□□□ 0.43
CBWD1-221ENST00000613355 FMN2Q9NZ56 1722 aa17.71■□□□□ 0.43
CBWD1-221ENST00000613355 NUTM2FA1L443 756 aa17.71■□□□□ 0.43
CBWD1-221ENST00000613355 ORAI2Q96SN7 254 aa17.71■□□□□ 0.43
CBWD1-221ENST00000613355 KIF1AQ12756 1690 aa17.69■□□□□ 0.42
CBWD1-221ENST00000613355 SIN3AQ96ST3 1273 aa17.68■□□□□ 0.42
CBWD1-221ENST00000613355 NUTM2BA6NNL0 878 aaPredicted RBP17.66■□□□□ 0.42
CBWD1-221ENST00000613355 NUTM2EB1AL46 878 aaPredicted RBP17.66■□□□□ 0.42
CBWD1-221ENST00000613355 NUTM2AQ8IVF1 878 aaPredicted RBP17.66■□□□□ 0.42
CBWD1-221ENST00000613355 L3MBTL2Q969R5 705 aa17.66■□□□□ 0.42
CBWD1-221ENST00000613355 ADGRB2O60241 1585 aa17.66■□□□□ 0.42
CBWD1-221ENST00000613355 MINK1Q8N4C8 1332 aaPredicted RBP17.66■□□□□ 0.42
CBWD1-221ENST00000613355 ARHGEF28Q8N1W1 1705 aaKnown RBP17.66■□□□□ 0.42
CBWD1-221ENST00000613355 TONSLQ96HA7 1378 aa17.66■□□□□ 0.42
CBWD1-221ENST00000613355 DDX17Q92841 729 aaKnown RBP17.65■□□□□ 0.42
CBWD1-221ENST00000613355 SOS2Q07890 1332 aaPredicted RBP17.65■□□□□ 0.42
CBWD1-221ENST00000613355 FOXO3O43524 673 aa17.64■□□□□ 0.42
CBWD1-221ENST00000613355 ILDR2Q71H61 639 aa17.64■□□□□ 0.42
CBWD1-221ENST00000613355 ANKARQ7Z5J8 1434 aa17.64■□□□□ 0.42
CBWD1-221ENST00000613355 PSME1Q06323 249 aa17.64■□□□□ 0.41
CBWD1-221ENST00000613355 HIRIP3Q9BW71 556 aaPredicted RBP17.64■□□□□ 0.41
CBWD1-221ENST00000613355 PHF8Q9UPP1 1060 aa17.64■□□□□ 0.41
CBWD1-221ENST00000613355 PNPLA6Q8IY17 1366 aa17.62■□□□□ 0.41
CBWD1-221ENST00000613355 ZNF772Q68DY9 489 aaPredicted RBP17.62■□□□□ 0.41
CBWD1-221ENST00000613355 RGPD8O14715 1765 aaPredicted RBP17.61■□□□□ 0.41
CBWD1-221ENST00000613355 WASLO00401 505 aaPredicted RBP17.61■□□□□ 0.41
CBWD1-221ENST00000613355 ROCK2O75116 1388 aaKnown RBP17.6■□□□□ 0.41
CBWD1-221ENST00000613355 TULP4Q9NRJ4 1543 aa17.59■□□□□ 0.41
CBWD1-221ENST00000613355 ITSN1Q15811 1721 aa17.59■□□□□ 0.41
CBWD1-221ENST00000613355 SOCS7O14512 581 aa17.59■□□□□ 0.41
CBWD1-221ENST00000613355 NBPF1Q3BBV0 1214 aa17.59■□□□□ 0.41
CBWD1-221ENST00000613355 XPCQ01831 940 aaPredicted RBP17.58■□□□□ 0.41
CBWD1-221ENST00000613355 KRT28Q7Z3Y7 464 aa17.58■□□□□ 0.41
CBWD1-221ENST00000613355 CENPJQ9HC77 1338 aaPredicted RBP17.58■□□□□ 0.4
CBWD1-221ENST00000613355 GPRASP1Q5JY77 1395 aa17.58■□□□□ 0.4
CBWD1-221ENST00000613355 LRP6O75581 1613 aa17.58■□□□□ 0.4
CBWD1-221ENST00000613355 TRPM1Q7Z4N2 1603 aa17.58■□□□□ 0.4
CBWD1-221ENST00000613355 HAP1P54257 671 aaPredicted RBP17.57■□□□□ 0.4
CBWD1-221ENST00000613355 PXDNQ92626 1479 aa17.57■□□□□ 0.4
CBWD1-221ENST00000613355 ADRA2BP18089 450 aa17.56■□□□□ 0.4
CBWD1-221ENST00000613355 NGDNQ8NEJ9 315 aaKnown RBP17.55■□□□□ 0.4
CBWD1-221ENST00000613355 PMFBP1Q8TBY8 1022 aa17.55■□□□□ 0.4
CBWD1-221ENST00000613355 C8orf37Q96NL8 207 aa17.55■□□□□ 0.4
CBWD1-221ENST00000613355 COL22A1Q8NFW1 1626 aaPredicted RBP17.55■□□□□ 0.4
CBWD1-221ENST00000613355 ADAMTS2O95450 1211 aa17.55■□□□□ 0.4
CBWD1-221ENST00000613355 LMOD2Q6P5Q4 547 aa17.55■□□□□ 0.4
CBWD1-221ENST00000613355 NGLY1Q96IV0 654 aa17.55■□□□□ 0.4
CBWD1-221ENST00000613355 QRICH2Q9H0J4 1663 aa17.54■□□□□ 0.4
CBWD1-221ENST00000613355 SRPK2P78362 688 aaKnown RBP17.54■□□□□ 0.4
CBWD1-221ENST00000613355 CDK19Q9BWU1 502 aa17.54■□□□□ 0.4
CBWD1-221ENST00000613355 PCGF6Q9BYE7 350 aa17.54■□□□□ 0.4
CBWD1-221ENST00000613355 USP32Q8NFA0 1604 aa17.54■□□□□ 0.4
CBWD1-221ENST00000613355 ARHGEF10O15013 1369 aa17.53■□□□□ 0.4
CBWD1-221ENST00000613355 SPATA31A3Q5VYP0 1347 aa17.53■□□□□ 0.4
CBWD1-221ENST00000613355 RGS17Q9UGC6 210 aaPredicted RBP17.53■□□□□ 0.4
CBWD1-221ENST00000613355 TNS3Q68CZ2 1445 aa17.52■□□□□ 0.4
CBWD1-221ENST00000613355 SBNO1A3KN83 1393 aa17.52■□□□□ 0.4
CBWD1-221ENST00000613355 AFF2P51816 1311 aa17.52■□□□□ 0.4
CBWD1-221ENST00000613355 NUDT16Q96DE0 195 aaKnown RBP17.52■□□□□ 0.4
CBWD1-221ENST00000613355 EVC2Q86UK5 1308 aa17.5■□□□□ 0.39
CBWD1-221ENST00000613355 POTEAQ6S8J7 498 aa17.5■□□□□ 0.39
CBWD1-221ENST00000613355 CARD11Q9BXL7 1154 aa17.5■□□□□ 0.39
CBWD1-221ENST00000613355 CCDC61Q9Y6R9 512 aa17.5■□□□□ 0.39
CBWD1-221ENST00000613355 CLSPNQ9HAW4 1339 aa17.5■□□□□ 0.39
CBWD1-221ENST00000613355 ATP7BP35670 1465 aa17.49■□□□□ 0.39
CBWD1-221ENST00000613355 PRR36Q9H6K5 1346 aa17.49■□□□□ 0.39
CBWD1-221ENST00000613355 PAK3O75914 559 aaPredicted RBP17.48■□□□□ 0.39
CBWD1-221ENST00000613355 MARF1Q9Y4F3 1742 aaKnown RBP17.48■□□□□ 0.39
CBWD1-221ENST00000613355 RXRBP28702 533 aa17.47■□□□□ 0.39
CBWD1-221ENST00000613355 USP21Q9UK80 565 aa17.47■□□□□ 0.39
CBWD1-221ENST00000613355 RALGAPBQ86X10 1494 aa17.46■□□□□ 0.39
CBWD1-221ENST00000613355 PLEKHG5O94827 1062 aa17.45■□□□□ 0.38
CBWD1-221ENST00000613355 NBPF8Q3BBV2 869 aa17.45■□□□□ 0.38
CBWD1-221ENST00000613355 TOPAZ1Q8N9V7 1692 aa17.44■□□□□ 0.38
CBWD1-221ENST00000613355 SLC24A1O60721 1099 aa17.44■□□□□ 0.38
CBWD1-221ENST00000613355 QTRT2Q9H974 415 aaKnown RBP17.44■□□□□ 0.38
CBWD1-221ENST00000613355 TRPC5Q9UL62 973 aaPredicted RBP17.44■□□□□ 0.38
CBWD1-221ENST00000613355 TIMELESSQ9UNS1 1208 aa17.44■□□□□ 0.38
CBWD1-221ENST00000613355 PPIP5K1Q6PFW1 1433 aa17.44■□□□□ 0.38
CBWD1-221ENST00000613355 CABP2Q9NPB3 220 aa17.43■□□□□ 0.38
CBWD1-221ENST00000613355 ACEP12821 1306 aa17.43■□□□□ 0.38
CBWD1-221ENST00000613355 PLEKHG3A1L390 1219 aa17.42■□□□□ 0.38
CBWD1-221ENST00000613355 RBM6P78332 1123 aaKnown RBP17.42■□□□□ 0.38
CBWD1-221ENST00000613355 CCER1Q8TC90 406 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms