RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 MCCP23508 829 aa16.43■□□□□ 0.22
TCF3-220ENST00000611869 PDE3AQ14432 1141 aa16.43■□□□□ 0.22
TCF3-220ENST00000611869 CFAP44Q96MT7 982 aa16.43■□□□□ 0.22
TCF3-220ENST00000611869 ZNF330Q9Y3S2 320 aaPredicted RBP16.42■□□□□ 0.22
TCF3-220ENST00000611869 C14orf93Q9H972 538 aaKnown RBP16.42■□□□□ 0.22
TCF3-220ENST00000611869 API5Q9BZZ5 524 aaKnown RBP16.42■□□□□ 0.22
TCF3-220ENST00000611869 RTEL1-TNFRSF6BF6WH68 1400 aa16.41■□□□□ 0.22
TCF3-220ENST00000611869 ATAD2Q6PL18 1390 aa16.41■□□□□ 0.22
TCF3-220ENST00000611869 ADGRL2O95490 1459 aa16.41■□□□□ 0.22
TCF3-220ENST00000611869 PSME1Q06323 249 aa16.41■□□□□ 0.22
TCF3-220ENST00000611869 EIF2S2P20042 333 aaKnown RBP16.4■□□□□ 0.22
TCF3-220ENST00000611869 DENND4BO75064 1496 aaPredicted RBP16.4■□□□□ 0.22
TCF3-220ENST00000611869 RRS1Q15050 365 aaKnown RBP16.4■□□□□ 0.22
TCF3-220ENST00000611869 WDR63Q8IWG1 891 aa16.4■□□□□ 0.22
TCF3-220ENST00000611869 WDR7Q9Y4E6 1490 aa16.4■□□□□ 0.22
TCF3-220ENST00000611869 TEFQ10587 303 aa16.39■□□□□ 0.22
TCF3-220ENST00000611869 AMER1Q5JTC6 1135 aaPredicted RBP16.39■□□□□ 0.22
TCF3-220ENST00000611869 FGD1P98174 961 aa16.39■□□□□ 0.21
TCF3-220ENST00000611869 TSPYL4Q9UJ04 414 aa16.39■□□□□ 0.21
TCF3-220ENST00000611869 KDM6BO15054 1643 aa16.39■□□□□ 0.21
TCF3-220ENST00000611869 CHMP4AQ9BY43 222 aa16.38■□□□□ 0.21
TCF3-220ENST00000611869 TAOK2Q9UL54 1235 aa16.38■□□□□ 0.21
TCF3-220ENST00000611869 SULT6B1Q6IMI4 303 aa16.38■□□□□ 0.21
TCF3-220ENST00000611869 KIAA1211Q6ZU35 1233 aa16.37■□□□□ 0.21
TCF3-220ENST00000611869 BACH2Q9BYV9 841 aa16.37■□□□□ 0.21
TCF3-220ENST00000611869 ABCC2Q92887 1545 aa16.37■□□□□ 0.21
TCF3-220ENST00000611869 DUSP27Q5VZP5 1158 aa16.37■□□□□ 0.21
TCF3-220ENST00000611869 NOB1Q9ULX3 412 aaKnown RBP16.37■□□□□ 0.21
TCF3-220ENST00000611869 FKBP5Q13451 457 aaPredicted RBP16.36■□□□□ 0.21
TCF3-220ENST00000611869 PDZRN3Q9UPQ7 1066 aa16.36■□□□□ 0.21
TCF3-220ENST00000611869 TMPOP42166 694 aaKnown RBP16.36■□□□□ 0.21
TCF3-220ENST00000611869 NUDT16Q96DE0 195 aaKnown RBP16.36■□□□□ 0.21
TCF3-220ENST00000611869 CCDC61Q9Y6R9 512 aa16.36■□□□□ 0.21
TCF3-220ENST00000611869 PER1O15534 1290 aaPredicted RBP16.35■□□□□ 0.21
TCF3-220ENST00000611869 NOL8Q76FK4 1167 aaKnown RBP16.35■□□□□ 0.21
TCF3-220ENST00000611869 NAP1L2Q9ULW6 460 aaPredicted RBP16.35■□□□□ 0.21
TCF3-220ENST00000611869 PARD3Q8TEW0 1356 aa16.35■□□□□ 0.21
TCF3-220ENST00000611869 A2MP01023 1474 aa16.35■□□□□ 0.21
TCF3-220ENST00000611869 TWISTNBQ3B726 338 aaPredicted RBP16.35■□□□□ 0.21
TCF3-220ENST00000611869 C1orf141Q5JVX7 400 aa16.35■□□□□ 0.21
TCF3-220ENST00000611869 THUMPD2Q9BTF0 503 aaKnown RBP16.35■□□□□ 0.21
TCF3-220ENST00000611869 C1orf115Q9H7X2 142 aa16.35■□□□□ 0.21
TCF3-220ENST00000611869 AAMPQ13685 434 aa16.34■□□□□ 0.21
TCF3-220ENST00000611869 ABTB2Q8N961 1025 aa16.34■□□□□ 0.21
TCF3-220ENST00000611869 GBP4Q96PP9 640 aa16.34■□□□□ 0.21
TCF3-220ENST00000611869 ARHGEF12Q9NZN5 1544 aa16.34■□□□□ 0.21
TCF3-220ENST00000611869 ZNF692Q9BU19 519 aaPredicted RBP16.34■□□□□ 0.21
TCF3-220ENST00000611869 RILPL2Q969X0 211 aa16.33■□□□□ 0.2
TCF3-220ENST00000611869 CHMP3Q9Y3E7 222 aa16.32■□□□□ 0.2
TCF3-220ENST00000611869 GCC2Q8IWJ2 1684 aa16.32■□□□□ 0.2
TCF3-220ENST00000611869 ATF7IPQ6VMQ6 1270 aa16.32■□□□□ 0.2
TCF3-220ENST00000611869 THEMISQ8N1K5 641 aaPredicted RBP16.32■□□□□ 0.2
TCF3-220ENST00000611869 PTMAP06454 111 aaKnown RBP16.32■□□□□ 0.2
TCF3-220ENST00000611869 NME9Q86XW9 330 aa16.32■□□□□ 0.2
TCF3-220ENST00000611869 UHRF1BP1Q6BDS2 1440 aa16.32■□□□□ 0.2
TCF3-220ENST00000611869 USP35Q9P2H5 1018 aa16.31■□□□□ 0.2
TCF3-220ENST00000611869 FCHSD2O94868 740 aa16.31■□□□□ 0.2
TCF3-220ENST00000611869 PLCB2Q00722 1185 aa16.31■□□□□ 0.2
TCF3-220ENST00000611869 ZNF518AQ6AHZ1 1483 aa16.31■□□□□ 0.2
TCF3-220ENST00000611869 FBLN1P23142 703 aa16.31■□□□□ 0.2
TCF3-220ENST00000611869 CEBPAP49715 358 aaPredicted RBP16.31■□□□□ 0.2
TCF3-220ENST00000611869 MVPQ14764 893 aaKnown RBP16.3■□□□□ 0.2
TCF3-220ENST00000611869 ABCC10Q5T3U5 1492 aa16.3■□□□□ 0.2
TCF3-220ENST00000611869 RARSP54136 660 aaKnown RBP16.3■□□□□ 0.2
TCF3-220ENST00000611869 EMILIN1Q9Y6C2 1016 aa16.3■□□□□ 0.2
TCF3-220ENST00000611869 L1TD1Q5T7N2 865 aaKnown RBP16.29■□□□□ 0.2
TCF3-220ENST00000611869 ESCO1Q5FWF5 840 aa16.29■□□□□ 0.2
TCF3-220ENST00000611869 C22orf23Q9BZE7 217 aa16.29■□□□□ 0.2
TCF3-220ENST00000611869 MBD5Q9P267 1494 aa16.28■□□□□ 0.2
TCF3-220ENST00000611869 CARD14Q9BXL6 1004 aa16.28■□□□□ 0.2
TCF3-220ENST00000611869 MSH5O43196 834 aa16.28■□□□□ 0.2
TCF3-220ENST00000611869 HDAC5Q9UQL6 1122 aa16.28■□□□□ 0.2
TCF3-220ENST00000611869 SPATA31E1Q6ZUB1 1445 aa16.27■□□□□ 0.2
TCF3-220ENST00000611869 NKTRP30414 1462 aaKnown RBP16.27■□□□□ 0.19
TCF3-220ENST00000611869 SSH1Q8WYL5 1049 aa16.27■□□□□ 0.19
TCF3-220ENST00000611869 CT47B1P0C2W7 299 aaPredicted RBP16.26■□□□□ 0.19
TCF3-220ENST00000611869 DCTN1Q14203 1278 aa16.26■□□□□ 0.19
TCF3-220ENST00000611869 NFE2L2Q16236 605 aa16.26■□□□□ 0.19
TCF3-220ENST00000611869 FOXD4L5Q5VV16 416 aaPredicted RBP16.26■□□□□ 0.19
TCF3-220ENST00000611869 FOXD4L4Q8WXT5 416 aaPredicted RBP16.26■□□□□ 0.19
TCF3-220ENST00000611869 WASLO00401 505 aaPredicted RBP16.26■□□□□ 0.19
TCF3-220ENST00000611869 C9orf78Q9NZ63 289 aaPredicted RBP16.26■□□□□ 0.19
TCF3-220ENST00000611869 ST18O60284 1047 aa16.25■□□□□ 0.19
TCF3-220ENST00000611869 ABCA8O94911 1581 aa16.25■□□□□ 0.19
TCF3-220ENST00000611869 GAS2L2Q8NHY3 880 aa16.25■□□□□ 0.19
TCF3-220ENST00000611869 GPATCH3Q96I76 525 aa16.25■□□□□ 0.19
TCF3-220ENST00000611869 ASXL1Q8IXJ9 1541 aa16.25■□□□□ 0.19
TCF3-220ENST00000611869 TMEM57Q8N5G2 664 aa16.24■□□□□ 0.19
TCF3-220ENST00000611869 NPHP1O15259 732 aa16.24■□□□□ 0.19
TCF3-220ENST00000611869 SLC4A2P04920 1241 aa16.24■□□□□ 0.19
TCF3-220ENST00000611869 COL17A1Q9UMD9 1497 aaPredicted RBP16.23■□□□□ 0.19
TCF3-220ENST00000611869 NINLQ9Y2I6 1382 aa16.23■□□□□ 0.19
TCF3-220ENST00000611869 NFKBIBQ15653 356 aa16.23■□□□□ 0.19
TCF3-220ENST00000611869 CCDC9Q9Y3X0 531 aaKnown RBP16.23■□□□□ 0.19
TCF3-220ENST00000611869 GOLGA6L4A6NEF3 574 aa16.23■□□□□ 0.19
TCF3-220ENST00000611869 GSE1Q14687 1217 aa16.23■□□□□ 0.19
TCF3-220ENST00000611869 NLRP2Q9NX02 1062 aa16.23■□□□□ 0.19
TCF3-220ENST00000611869 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.22■□□□□ 0.197e-7■■■□□ 15.1
TCF3-220ENST00000611869 GPRASP1Q5JY77 1395 aa16.22■□□□□ 0.19
TCF3-220ENST00000611869 FYB1O15117 783 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms