RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 POGKQ9P215 609 aa19.36■□□□□ 0.69
SENP3-209ENST00000610454 NHSL1Q5SYE7 1610 aa19.36■□□□□ 0.69
SENP3-209ENST00000610454 PLEKHH1Q9ULM0 1364 aa19.35■□□□□ 0.69
SENP3-209ENST00000610454 ADGRB1O14514 1584 aa19.35■□□□□ 0.69
SENP3-209ENST00000610454 DLC1Q96QB1 1528 aa19.35■□□□□ 0.69
SENP3-209ENST00000610454 NEUROD1Q13562 356 aa19.33■□□□□ 0.68
SENP3-209ENST00000610454 PRAM1Q96QH2 718 aa19.33■□□□□ 0.68
SENP3-209ENST00000610454 SAFB2Q14151 953 aaKnown RBP eCLIP19.32■□□□□ 0.68
SENP3-209ENST00000610454 TRAK1Q9UPV9 953 aa19.32■□□□□ 0.68
SENP3-209ENST00000610454 KIAA1210Q9ULL0 1709 aa19.31■□□□□ 0.68
SENP3-209ENST00000610454 FMN2Q9NZ56 1722 aa19.31■□□□□ 0.68
SENP3-209ENST00000610454 SHPRHQ149N8 1683 aa19.3■□□□□ 0.68
SENP3-209ENST00000610454 ESCO1Q5FWF5 840 aa19.3■□□□□ 0.68
SENP3-209ENST00000610454 ORAI2Q96SN7 254 aa19.3■□□□□ 0.68
SENP3-209ENST00000610454 SIN3AQ96ST3 1273 aa19.3■□□□□ 0.68
SENP3-209ENST00000610454 NUTM2FA1L443 756 aa19.29■□□□□ 0.68
SENP3-209ENST00000610454 SPATA31A6Q5VVP1 1343 aa19.28■□□□□ 0.68
SENP3-209ENST00000610454 LRRC59Q96AG4 307 aaKnown RBP19.28■□□□□ 0.68
SENP3-209ENST00000610454 DDX17Q92841 729 aaKnown RBP19.27■□□□□ 0.68
SENP3-209ENST00000610454 ARHGEF28Q8N1W1 1705 aaKnown RBP19.26■□□□□ 0.67
SENP3-209ENST00000610454 L3MBTL2Q969R5 705 aa19.26■□□□□ 0.67
SENP3-209ENST00000610454 NPHP3Q7Z494 1330 aa19.25■□□□□ 0.67
SENP3-209ENST00000610454 KIF1AQ12756 1690 aa19.25■□□□□ 0.67
SENP3-209ENST00000610454 ADGRB2O60241 1585 aa19.25■□□□□ 0.67
SENP3-209ENST00000610454 MEX3CQ5U5Q3 659 aaKnown RBP19.25■□□□□ 0.67
SENP3-209ENST00000610454 ILDR2Q71H61 639 aa19.24■□□□□ 0.67
SENP3-209ENST00000610454 MINK1Q8N4C8 1332 aaPredicted RBP19.24■□□□□ 0.67
SENP3-209ENST00000610454 EIF3AQ14152 1382 aaKnown RBP19.23■□□□□ 0.67
SENP3-209ENST00000610454 RGPD8O14715 1765 aaPredicted RBP19.22■□□□□ 0.67
SENP3-209ENST00000610454 HIRIP3Q9BW71 556 aaPredicted RBP19.22■□□□□ 0.67
SENP3-209ENST00000610454 SOS2Q07890 1332 aaPredicted RBP19.22■□□□□ 0.67
SENP3-209ENST00000610454 TONSLQ96HA7 1378 aa19.21■□□□□ 0.67
SENP3-209ENST00000610454 NUTM2BA6NNL0 878 aaPredicted RBP19.21■□□□□ 0.67
SENP3-209ENST00000610454 NUTM2EB1AL46 878 aaPredicted RBP19.21■□□□□ 0.67
SENP3-209ENST00000610454 FOXO3O43524 673 aa19.21■□□□□ 0.67
SENP3-209ENST00000610454 NUTM2AQ8IVF1 878 aaPredicted RBP19.21■□□□□ 0.67
SENP3-209ENST00000610454 ANKARQ7Z5J8 1434 aa19.2■□□□□ 0.66
SENP3-209ENST00000610454 PNPLA6Q8IY17 1366 aa19.19■□□□□ 0.66
SENP3-209ENST00000610454 NBPF1Q3BBV0 1214 aa19.19■□□□□ 0.66
SENP3-209ENST00000610454 LRP6O75581 1613 aa19.18■□□□□ 0.66
SENP3-209ENST00000610454 PHF8Q9UPP1 1060 aa19.18■□□□□ 0.66
SENP3-209ENST00000610454 TRPM1Q7Z4N2 1603 aa19.18■□□□□ 0.66
SENP3-209ENST00000610454 XPCQ01831 940 aaPredicted RBP19.17■□□□□ 0.66
SENP3-209ENST00000610454 PXDNQ92626 1479 aa19.16■□□□□ 0.66
SENP3-209ENST00000610454 TULP4Q9NRJ4 1543 aa19.16■□□□□ 0.66
SENP3-209ENST00000610454 WASLO00401 505 aaPredicted RBP19.16■□□□□ 0.66
SENP3-209ENST00000610454 ROCK2O75116 1388 aaKnown RBP19.16■□□□□ 0.66
SENP3-209ENST00000610454 USP32Q8NFA0 1604 aa19.14■□□□□ 0.66
SENP3-209ENST00000610454 ITSN1Q15811 1721 aa19.14■□□□□ 0.66
SENP3-209ENST00000610454 PSME1Q06323 249 aa19.14■□□□□ 0.65
SENP3-209ENST00000610454 PCGF6Q9BYE7 350 aa19.14■□□□□ 0.65
SENP3-209ENST00000610454 CENPJQ9HC77 1338 aaPredicted RBP19.13■□□□□ 0.65
SENP3-209ENST00000610454 QRICH2Q9H0J4 1663 aa19.12■□□□□ 0.65
SENP3-209ENST00000610454 COL22A1Q8NFW1 1626 aaPredicted RBP19.12■□□□□ 0.65
SENP3-209ENST00000610454 KRT28Q7Z3Y7 464 aa19.12■□□□□ 0.65
SENP3-209ENST00000610454 RGS17Q9UGC6 210 aaPredicted RBP19.12■□□□□ 0.65
SENP3-209ENST00000610454 ZNF772Q68DY9 489 aaPredicted RBP19.11■□□□□ 0.65
SENP3-209ENST00000610454 PMFBP1Q8TBY8 1022 aa19.11■□□□□ 0.65
SENP3-209ENST00000610454 SOCS7O14512 581 aa19.1■□□□□ 0.65
SENP3-209ENST00000610454 GPRASP1Q5JY77 1395 aa19.09■□□□□ 0.65
SENP3-209ENST00000610454 ADAMTS2O95450 1211 aa19.09■□□□□ 0.65
SENP3-209ENST00000610454 C8orf37Q96NL8 207 aa19.09■□□□□ 0.65
SENP3-209ENST00000610454 CDK19Q9BWU1 502 aa19.09■□□□□ 0.65
SENP3-209ENST00000610454 PRR36Q9H6K5 1346 aa19.08■□□□□ 0.65
SENP3-209ENST00000610454 LMOD2Q6P5Q4 547 aa19.08■□□□□ 0.64
SENP3-209ENST00000610454 NGDNQ8NEJ9 315 aaKnown RBP19.08■□□□□ 0.64
SENP3-209ENST00000610454 ATP7BP35670 1465 aa19.08■□□□□ 0.64
SENP3-209ENST00000610454 TNS3Q68CZ2 1445 aa19.08■□□□□ 0.64
SENP3-209ENST00000610454 SPATA31A3Q5VYP0 1347 aa19.07■□□□□ 0.64
SENP3-209ENST00000610454 SRPK2P78362 688 aaKnown RBP19.07■□□□□ 0.64
SENP3-209ENST00000610454 POTEAQ6S8J7 498 aa19.07■□□□□ 0.64
SENP3-209ENST00000610454 NUDT16Q96DE0 195 aaKnown RBP19.07■□□□□ 0.64
SENP3-209ENST00000610454 AFF2P51816 1311 aa19.06■□□□□ 0.64
SENP3-209ENST00000610454 HAP1P54257 671 aaPredicted RBP19.06■□□□□ 0.64
SENP3-209ENST00000610454 NBPF8Q3BBV2 869 aa19.06■□□□□ 0.64
SENP3-209ENST00000610454 NGLY1Q96IV0 654 aa19.06■□□□□ 0.64
SENP3-209ENST00000610454 SBNO1A3KN83 1393 aa19.06■□□□□ 0.64
SENP3-209ENST00000610454 ARHGEF10O15013 1369 aa19.06■□□□□ 0.64
SENP3-209ENST00000610454 RALGAPBQ86X10 1494 aa19.04■□□□□ 0.64
SENP3-209ENST00000610454 CARD11Q9BXL7 1154 aa19.04■□□□□ 0.64
SENP3-209ENST00000610454 TOPAZ1Q8N9V7 1692 aa19.04■□□□□ 0.64
SENP3-209ENST00000610454 MARF1Q9Y4F3 1742 aaKnown RBP19.03■□□□□ 0.64
SENP3-209ENST00000610454 CCDC61Q9Y6R9 512 aa19.03■□□□□ 0.64
SENP3-209ENST00000610454 EVC2Q86UK5 1308 aa19.02■□□□□ 0.64
SENP3-209ENST00000610454 CLSPNQ9HAW4 1339 aa19.01■□□□□ 0.63
SENP3-209ENST00000610454 TRPM3Q9HCF6 1732 aaPredicted RBP19.01■□□□□ 0.63
SENP3-209ENST00000610454 PAK3O75914 559 aaPredicted RBP19.01■□□□□ 0.63
SENP3-209ENST00000610454 PLEKHG5O94827 1062 aa19.01■□□□□ 0.63
SENP3-209ENST00000610454 CABP2Q9NPB3 220 aa18.99■□□□□ 0.63
SENP3-209ENST00000610454 PPIP5K1Q6PFW1 1433 aa18.99■□□□□ 0.63
SENP3-209ENST00000610454 ALS2Q96Q42 1657 aa18.98■□□□□ 0.63
SENP3-209ENST00000610454 RXRBP28702 533 aa18.97■□□□□ 0.63
SENP3-209ENST00000610454 CCER1Q8TC90 406 aaPredicted RBP18.97■□□□□ 0.63
SENP3-209ENST00000610454 USP21Q9UK80 565 aa18.97■□□□□ 0.63
SENP3-209ENST00000610454 ACEP12821 1306 aa18.97■□□□□ 0.63
SENP3-209ENST00000610454 ABCA3Q99758 1704 aa18.97■□□□□ 0.63
SENP3-209ENST00000610454 POLR3AO14802 1390 aaPredicted RBP18.96■□□□□ 0.63
SENP3-209ENST00000610454 PLEKHG3A1L390 1219 aa18.96■□□□□ 0.63
SENP3-209ENST00000610454 CABLES1Q8TDN4 633 aa18.96■□□□□ 0.63
SENP3-209ENST00000610454 QTRT2Q9H974 415 aaKnown RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms