RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 L3MBTL2Q969R5 705 aa18.51■□□□□ 0.55
CD9-212ENST00000610354 PHLPP1O60346 1717 aa18.5■□□□□ 0.55
CD9-212ENST00000610354 DLC1Q96QB1 1528 aa18.5■□□□□ 0.55
CD9-212ENST00000610354 C1orf167Q5SNV9 1468 aa18.49■□□□□ 0.55
CD9-212ENST00000610354 KIAA1210Q9ULL0 1709 aa18.49■□□□□ 0.55
CD9-212ENST00000610354 CDC42BPGQ6DT37 1551 aa18.48■□□□□ 0.55
CD9-212ENST00000610354 COL16A1Q07092 1604 aaPredicted RBP18.48■□□□□ 0.55
CD9-212ENST00000610354 AHDC1Q5TGY3 1603 aaPredicted RBP18.48■□□□□ 0.55
CD9-212ENST00000610354 NBPF1Q3BBV0 1214 aa18.47■□□□□ 0.55
CD9-212ENST00000610354 PRAM1Q96QH2 718 aa18.47■□□□□ 0.55
CD9-212ENST00000610354 TRAK1Q9UPV9 953 aa18.47■□□□□ 0.55
CD9-212ENST00000610354 PCGF6Q9BYE7 350 aa18.46■□□□□ 0.55
CD9-212ENST00000610354 ORAI2Q96SN7 254 aa18.45■□□□□ 0.54
CD9-212ENST00000610354 NHSL1Q5SYE7 1610 aa18.44■□□□□ 0.54
CD9-212ENST00000610354 FMN2Q9NZ56 1722 aa18.44■□□□□ 0.54
CD9-212ENST00000610354 MED1Q15648 1581 aaPredicted RBP18.44■□□□□ 0.54
CD9-212ENST00000610354 SAFB2Q14151 953 aaKnown RBP eCLIP18.44■□□□□ 0.54
CD9-212ENST00000610354 DDX17Q92841 729 aaKnown RBP18.44■□□□□ 0.54
CD9-212ENST00000610354 ARHGEF28Q8N1W1 1705 aaKnown RBP18.44■□□□□ 0.54
CD9-212ENST00000610354 NUTM2FA1L443 756 aa18.41■□□□□ 0.54
CD9-212ENST00000610354 RGPD8O14715 1765 aaPredicted RBP18.41■□□□□ 0.54
CD9-212ENST00000610354 DISP3Q9P2K9 1392 aa18.4■□□□□ 0.54
CD9-212ENST00000610354 NBPF8Q3BBV2 869 aa18.4■□□□□ 0.54
CD9-212ENST00000610354 POGKQ9P215 609 aa18.4■□□□□ 0.54
CD9-212ENST00000610354 TRPM1Q7Z4N2 1603 aa18.39■□□□□ 0.53
CD9-212ENST00000610354 ADGRB2O60241 1585 aa18.38■□□□□ 0.53
CD9-212ENST00000610354 MINK1Q8N4C8 1332 aaPredicted RBP18.37■□□□□ 0.53
CD9-212ENST00000610354 USP32Q8NFA0 1604 aa18.37■□□□□ 0.53
CD9-212ENST00000610354 JCADQ9P266 1359 aa18.36■□□□□ 0.53
CD9-212ENST00000610354 ESCO1Q5FWF5 840 aa18.36■□□□□ 0.53
CD9-212ENST00000610354 HIRIP3Q9BW71 556 aaPredicted RBP18.36■□□□□ 0.53
CD9-212ENST00000610354 SHPRHQ149N8 1683 aa18.35■□□□□ 0.53
CD9-212ENST00000610354 SOS2Q07890 1332 aaPredicted RBP18.33■□□□□ 0.53
CD9-212ENST00000610354 MAPK8IP2Q13387 824 aaPredicted RBP18.32■□□□□ 0.52
CD9-212ENST00000610354 TONSLQ96HA7 1378 aa18.32■□□□□ 0.52
CD9-212ENST00000610354 PRR36Q9H6K5 1346 aa18.32■□□□□ 0.52
CD9-212ENST00000610354 WASLO00401 505 aaPredicted RBP18.31■□□□□ 0.52
CD9-212ENST00000610354 ILDR2Q71H61 639 aa18.31■□□□□ 0.52
CD9-212ENST00000610354 LRP6O75581 1613 aa18.31■□□□□ 0.52
CD9-212ENST00000610354 PXDNQ92626 1479 aa18.31■□□□□ 0.52
CD9-212ENST00000610354 FOXO3O43524 673 aa18.3■□□□□ 0.52
CD9-212ENST00000610354 LRRC59Q96AG4 307 aaKnown RBP18.3■□□□□ 0.52
CD9-212ENST00000610354 XPCQ01831 940 aaPredicted RBP18.29■□□□□ 0.52
CD9-212ENST00000610354 RGS17Q9UGC6 210 aaPredicted RBP18.29■□□□□ 0.52
CD9-212ENST00000610354 PNPLA6Q8IY17 1366 aa18.29■□□□□ 0.52
CD9-212ENST00000610354 KIF1AQ12756 1690 aa18.29■□□□□ 0.52
CD9-212ENST00000610354 ANKARQ7Z5J8 1434 aa18.29■□□□□ 0.52
CD9-212ENST00000610354 PHF8Q9UPP1 1060 aa18.28■□□□□ 0.52
CD9-212ENST00000610354 GPRASP1Q5JY77 1395 aa18.28■□□□□ 0.52
CD9-212ENST00000610354 TULP4Q9NRJ4 1543 aa18.28■□□□□ 0.52
CD9-212ENST00000610354 ROCK2O75116 1388 aaKnown RBP18.27■□□□□ 0.52
CD9-212ENST00000610354 SPATA31A6Q5VVP1 1343 aa18.27■□□□□ 0.52
CD9-212ENST00000610354 NPHP3Q7Z494 1330 aa18.27■□□□□ 0.52
CD9-212ENST00000610354 QRICH2Q9H0J4 1663 aa18.27■□□□□ 0.51
CD9-212ENST00000610354 CENPJQ9HC77 1338 aaPredicted RBP18.26■□□□□ 0.51
CD9-212ENST00000610354 PMFBP1Q8TBY8 1022 aa18.25■□□□□ 0.51
CD9-212ENST00000610354 CDK19Q9BWU1 502 aa18.25■□□□□ 0.51
CD9-212ENST00000610354 RALGAPBQ86X10 1494 aa18.25■□□□□ 0.51
CD9-212ENST00000610354 ATP7BP35670 1465 aa18.24■□□□□ 0.51
CD9-212ENST00000610354 KRT28Q7Z3Y7 464 aa18.23■□□□□ 0.51
CD9-212ENST00000610354 COL22A1Q8NFW1 1626 aaPredicted RBP18.23■□□□□ 0.51
CD9-212ENST00000610354 NUTM2BA6NNL0 878 aaPredicted RBP18.23■□□□□ 0.51
CD9-212ENST00000610354 NUTM2EB1AL46 878 aaPredicted RBP18.23■□□□□ 0.51
CD9-212ENST00000610354 NUTM2AQ8IVF1 878 aaPredicted RBP18.23■□□□□ 0.51
CD9-212ENST00000610354 NUDT16Q96DE0 195 aaKnown RBP18.23■□□□□ 0.51
CD9-212ENST00000610354 CLSPNQ9HAW4 1339 aa18.22■□□□□ 0.51
CD9-212ENST00000610354 EIF3AQ14152 1382 aaKnown RBP18.22■□□□□ 0.51
CD9-212ENST00000610354 TOPAZ1Q8N9V7 1692 aa18.21■□□□□ 0.51
CD9-212ENST00000610354 SPATA31A3Q5VYP0 1347 aa18.2■□□□□ 0.5
CD9-212ENST00000610354 CARD11Q9BXL7 1154 aa18.2■□□□□ 0.5
CD9-212ENST00000610354 ITSN1Q15811 1721 aa18.19■□□□□ 0.5
CD9-212ENST00000610354 TRPM3Q9HCF6 1732 aaPredicted RBP18.19■□□□□ 0.5
CD9-212ENST00000610354 POTEAQ6S8J7 498 aa18.19■□□□□ 0.5
CD9-212ENST00000610354 CABP2Q9NPB3 220 aa18.18■□□□□ 0.5
CD9-212ENST00000610354 PSME1Q06323 249 aa18.17■□□□□ 0.5
CD9-212ENST00000610354 SBNO1A3KN83 1393 aa18.16■□□□□ 0.5
CD9-212ENST00000610354 CCER1Q8TC90 406 aaPredicted RBP18.16■□□□□ 0.5
CD9-212ENST00000610354 TNS3Q68CZ2 1445 aa18.15■□□□□ 0.5
CD9-212ENST00000610354 PLEKHG3A1L390 1219 aa18.15■□□□□ 0.5
CD9-212ENST00000610354 MEX3CQ5U5Q3 659 aaKnown RBP18.15■□□□□ 0.5
CD9-212ENST00000610354 TIMELESSQ9UNS1 1208 aa18.15■□□□□ 0.5
CD9-212ENST00000610354 CCDC61Q9Y6R9 512 aa18.15■□□□□ 0.5
CD9-212ENST00000610354 ALS2Q96Q42 1657 aa18.14■□□□□ 0.49
CD9-212ENST00000610354 SRPK2P78362 688 aaKnown RBP18.14■□□□□ 0.49
CD9-212ENST00000610354 POLR3AO14802 1390 aaPredicted RBP18.13■□□□□ 0.49
CD9-212ENST00000610354 ADAMTS2O95450 1211 aa18.13■□□□□ 0.49
CD9-212ENST00000610354 NGDNQ8NEJ9 315 aaKnown RBP18.13■□□□□ 0.49
CD9-212ENST00000610354 ACEP12821 1306 aa18.12■□□□□ 0.49
CD9-212ENST00000610354 MARF1Q9Y4F3 1742 aaKnown RBP18.12■□□□□ 0.49
CD9-212ENST00000610354 SBNO2Q9Y2G9 1366 aa18.11■□□□□ 0.49
CD9-212ENST00000610354 AFF2P51816 1311 aa18.11■□□□□ 0.49
CD9-212ENST00000610354 EVC2Q86UK5 1308 aa18.11■□□□□ 0.49
CD9-212ENST00000610354 ABCA3Q99758 1704 aa18.11■□□□□ 0.49
CD9-212ENST00000610354 PPIP5K1Q6PFW1 1433 aa18.11■□□□□ 0.49
CD9-212ENST00000610354 CABLES1Q8TDN4 633 aa18.1■□□□□ 0.49
CD9-212ENST00000610354 C8orf37Q96NL8 207 aa18.1■□□□□ 0.49
CD9-212ENST00000610354 CABP1Q9NZU7 370 aa18.09■□□□□ 0.49
CD9-212ENST00000610354 LMOD2Q6P5Q4 547 aa18.08■□□□□ 0.49
CD9-212ENST00000610354 TESK2Q96S53 571 aa18.08■□□□□ 0.49
CD9-212ENST00000610354 ARHGEF10O15013 1369 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms