RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 LRRC59Q96AG4 307 aaKnown RBP26.52■■□□□ 1.84
CCDC12-208ENST00000603885 LRP6O75581 1613 aa26.51■■□□□ 1.83
CCDC12-208ENST00000603885 DHX57Q6P158 1386 aaKnown RBP26.51■■□□□ 1.83
CCDC12-208ENST00000603885 DDX17Q92841 729 aaKnown RBP26.51■■□□□ 1.83
CCDC12-208ENST00000603885 ORAI2Q96SN7 254 aa26.51■■□□□ 1.83
CCDC12-208ENST00000603885 PLEKHH1Q9ULM0 1364 aa26.49■■□□□ 1.83
CCDC12-208ENST00000603885 MEX3CQ5U5Q3 659 aaKnown RBP26.49■■□□□ 1.83
CCDC12-208ENST00000603885 DCAF11Q8TEB1 546 aa26.48■■□□□ 1.83
CCDC12-208ENST00000603885 SIRT1Q96EB6 747 aa26.48■■□□□ 1.83
CCDC12-208ENST00000603885 POTEAQ6S8J7 498 aa26.46■■□□□ 1.83
CCDC12-208ENST00000603885 STAC3Q96MF2 364 aa26.46■■□□□ 1.83
CCDC12-208ENST00000603885 KDM2AQ9Y2K7 1162 aa26.46■■□□□ 1.83
CCDC12-208ENST00000603885 NUTM2BA6NNL0 878 aaPredicted RBP26.44■■□□□ 1.82
CCDC12-208ENST00000603885 NUTM2EB1AL46 878 aaPredicted RBP26.44■■□□□ 1.82
CCDC12-208ENST00000603885 ESCO1Q5FWF5 840 aa26.44■■□□□ 1.82
CCDC12-208ENST00000603885 NUTM2AQ8IVF1 878 aaPredicted RBP26.44■■□□□ 1.82
CCDC12-208ENST00000603885 PNPLA6Q8IY17 1366 aa26.44■■□□□ 1.82
CCDC12-208ENST00000603885 SOS2Q07890 1332 aaPredicted RBP26.42■■□□□ 1.82
CCDC12-208ENST00000603885 DLC1Q96QB1 1528 aa26.41■■□□□ 1.82
CCDC12-208ENST00000603885 FMN2Q9NZ56 1722 aa26.41■■□□□ 1.82
CCDC12-208ENST00000603885 ADGRB1O14514 1584 aa26.41■■□□□ 1.82
CCDC12-208ENST00000603885 NUTM2FA1L443 756 aa26.4■■□□□ 1.82
CCDC12-208ENST00000603885 NPHP3Q7Z494 1330 aa26.39■■□□□ 1.82
CCDC12-208ENST00000603885 PRAM1Q96QH2 718 aa26.39■■□□□ 1.82
CCDC12-208ENST00000603885 ZNF772Q68DY9 489 aaPredicted RBP26.38■■□□□ 1.81
CCDC12-208ENST00000603885 POGKQ9P215 609 aa26.37■■□□□ 1.81
CCDC12-208ENST00000603885 SAFB2Q14151 953 aaKnown RBP eCLIP26.36■■□□□ 1.81
CCDC12-208ENST00000603885 FOXO3O43524 673 aa26.34■■□□□ 1.81
CCDC12-208ENST00000603885 TRAK1Q9UPV9 953 aa26.34■■□□□ 1.81
CCDC12-208ENST00000603885 PXDNQ92626 1479 aa26.33■■□□□ 1.81
CCDC12-208ENST00000603885 KIF1AQ12756 1690 aa26.32■■□□□ 1.8
CCDC12-208ENST00000603885 ADGRB2O60241 1585 aa26.29■■□□□ 1.8
CCDC12-208ENST00000603885 XPCQ01831 940 aaPredicted RBP26.29■■□□□ 1.8
CCDC12-208ENST00000603885 AFF2P51816 1311 aa26.29■■□□□ 1.8
CCDC12-208ENST00000603885 COL22A1Q8NFW1 1626 aaPredicted RBP26.28■■□□□ 1.8
CCDC12-208ENST00000603885 C8orf37Q96NL8 207 aa26.28■■□□□ 1.8
CCDC12-208ENST00000603885 RGPD8O14715 1765 aaPredicted RBP26.26■■□□□ 1.79
CCDC12-208ENST00000603885 ADAMTS2O95450 1211 aa26.26■■□□□ 1.79
CCDC12-208ENST00000603885 PHF8Q9UPP1 1060 aa26.25■■□□□ 1.79
CCDC12-208ENST00000603885 ANKARQ7Z5J8 1434 aa26.24■■□□□ 1.79
CCDC12-208ENST00000603885 KIAA1210Q9ULL0 1709 aa26.23■■□□□ 1.79
CCDC12-208ENST00000603885 MINK1Q8N4C8 1332 aaPredicted RBP26.23■■□□□ 1.79
CCDC12-208ENST00000603885 HIRIP3Q9BW71 556 aaPredicted RBP26.23■■□□□ 1.79
CCDC12-208ENST00000603885 EIF3AQ14152 1382 aaKnown RBP26.22■■□□□ 1.79
CCDC12-208ENST00000603885 NGLY1Q96IV0 654 aa26.22■■□□□ 1.79
CCDC12-208ENST00000603885 ARHGEF28Q8N1W1 1705 aaKnown RBP26.22■■□□□ 1.79
CCDC12-208ENST00000603885 RXRBP28702 533 aa26.21■■□□□ 1.79
CCDC12-208ENST00000603885 KRT28Q7Z3Y7 464 aa26.21■■□□□ 1.79
CCDC12-208ENST00000603885 USP32Q8NFA0 1604 aa26.21■■□□□ 1.79
CCDC12-208ENST00000603885 SPATA31A3Q5VYP0 1347 aa26.19■■□□□ 1.78
CCDC12-208ENST00000603885 PSME1Q06323 249 aa26.18■■□□□ 1.78
CCDC12-208ENST00000603885 WASLO00401 505 aaPredicted RBP26.17■■□□□ 1.78
CCDC12-208ENST00000603885 TULP4Q9NRJ4 1543 aa26.17■■□□□ 1.78
CCDC12-208ENST00000603885 QTRT2Q9H974 415 aaKnown RBP26.16■■□□□ 1.78
CCDC12-208ENST00000603885 TNS3Q68CZ2 1445 aa26.15■■□□□ 1.78
CCDC12-208ENST00000603885 PMFBP1Q8TBY8 1022 aa26.15■■□□□ 1.78
CCDC12-208ENST00000603885 CDK12Q9NYV4 1490 aaPredicted RBP26.15■■□□□ 1.78
CCDC12-208ENST00000603885 SBNO1A3KN83 1393 aa26.13■■□□□ 1.77
CCDC12-208ENST00000603885 NBPF1Q3BBV0 1214 aa26.13■■□□□ 1.77
CCDC12-208ENST00000603885 L3MBTL2Q969R5 705 aa26.13■■□□□ 1.77
CCDC12-208ENST00000603885 SIN3AQ96ST3 1273 aa26.13■■□□□ 1.77
CCDC12-208ENST00000603885 USP21Q9UK80 565 aa26.13■■□□□ 1.77
CCDC12-208ENST00000603885 PRR36Q9H6K5 1346 aa26.13■■□□□ 1.77
CCDC12-208ENST00000603885 MARF1Q9Y4F3 1742 aaKnown RBP26.12■■□□□ 1.77
CCDC12-208ENST00000603885 RBM6P78332 1123 aaKnown RBP26.12■■□□□ 1.77
CCDC12-208ENST00000603885 FNBP4Q8N3X1 1017 aaPredicted RBP26.12■■□□□ 1.77
CCDC12-208ENST00000603885 ARHGEF10O15013 1369 aa26.09■■□□□ 1.77
CCDC12-208ENST00000603885 NEUROD1Q13562 356 aa26.09■■□□□ 1.77
CCDC12-208ENST00000603885 GPRASP1Q5JY77 1395 aa26.08■■□□□ 1.77
CCDC12-208ENST00000603885 TRPC5Q9UL62 973 aaPredicted RBP26.08■■□□□ 1.77
CCDC12-208ENST00000603885 LMOD2Q6P5Q4 547 aa26.07■■□□□ 1.76
CCDC12-208ENST00000603885 ATP7BP35670 1465 aa26.06■■□□□ 1.76
CCDC12-208ENST00000603885 ITSN1Q15811 1721 aa26.06■■□□□ 1.76
CCDC12-208ENST00000603885 HAP1P54257 671 aaPredicted RBP26.06■■□□□ 1.76
CCDC12-208ENST00000603885 NGDNQ8NEJ9 315 aaKnown RBP26.05■■□□□ 1.76
CCDC12-208ENST00000603885 NUDT16Q96DE0 195 aaKnown RBP26.05■■□□□ 1.76
CCDC12-208ENST00000603885 CDK19Q9BWU1 502 aa26.05■■□□□ 1.76
CCDC12-208ENST00000603885 TRIM26Q12899 539 aaPredicted RBP26.04■■□□□ 1.76
CCDC12-208ENST00000603885 TRPM3Q9HCF6 1732 aaPredicted RBP26.04■■□□□ 1.76
CCDC12-208ENST00000603885 RGS12O14924 1447 aa26.04■■□□□ 1.76
CCDC12-208ENST00000603885 ATRNO75882 1429 aa26.04■■□□□ 1.76
CCDC12-208ENST00000603885 BCL9LQ86UU0 1499 aa26.03■■□□□ 1.76
CCDC12-208ENST00000603885 CABLES1Q8TDN4 633 aa26.02■■□□□ 1.76
CCDC12-208ENST00000603885 CENPJQ9HC77 1338 aaPredicted RBP26.02■■□□□ 1.76
CCDC12-208ENST00000603885 PLEKHG5O94827 1062 aa26.01■■□□□ 1.75
CCDC12-208ENST00000603885 ABCA3Q99758 1704 aa26■■□□□ 1.75
CCDC12-208ENST00000603885 TRPM1Q7Z4N2 1603 aa26■■□□□ 1.75
CCDC12-208ENST00000603885 ALS2Q96Q42 1657 aa25.99■■□□□ 1.75
CCDC12-208ENST00000603885 SLIT2O94813 1529 aa25.98■■□□□ 1.75
CCDC12-208ENST00000603885 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.98■■□□□ 1.75
CCDC12-208ENST00000603885 TOPAZ1Q8N9V7 1692 aa25.97■■□□□ 1.75
CCDC12-208ENST00000603885 CCDC61Q9Y6R9 512 aa25.97■■□□□ 1.75
CCDC12-208ENST00000603885 QRICH2Q9H0J4 1663 aa25.96■■□□□ 1.75
CCDC12-208ENST00000603885 PAK3O75914 559 aaPredicted RBP25.96■■□□□ 1.75
CCDC12-208ENST00000603885 UNC5CLQ8IV45 518 aa25.96■■□□□ 1.75
CCDC12-208ENST00000603885 UPF1Q92900 1129 aaKnown RBP eCLIP25.96■■□□□ 1.75
CCDC12-208ENST00000603885 ROCK2O75116 1388 aaKnown RBP25.95■■□□□ 1.75
CCDC12-208ENST00000603885 SRPK2P78362 688 aaKnown RBP25.94■■□□□ 1.74
CCDC12-208ENST00000603885 GJD4Q96KN9 370 aaPredicted RBP25.93■■□□□ 1.74
CCDC12-208ENST00000603885 POLR3AO14802 1390 aaPredicted RBP25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms