RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 SIRT1Q96EB6 747 aa24.5■■□□□ 1.51
NOTCH3-205ENST00000600841 PLEKHH1Q9ULM0 1364 aa24.5■■□□□ 1.51
NOTCH3-205ENST00000600841 SHPRHQ149N8 1683 aa24.48■■□□□ 1.51
NOTCH3-205ENST00000600841 SPATA31A6Q5VVP1 1343 aa24.46■■□□□ 1.51
NOTCH3-205ENST00000600841 ORAI2Q96SN7 254 aa24.46■■□□□ 1.51
NOTCH3-205ENST00000600841 ADGRB1O14514 1584 aa24.46■■□□□ 1.51
NOTCH3-205ENST00000600841 DDX17Q92841 729 aaKnown RBP24.45■■□□□ 1.5
NOTCH3-205ENST00000600841 LRRC59Q96AG4 307 aaKnown RBP24.44■■□□□ 1.5
NOTCH3-205ENST00000600841 PRAM1Q96QH2 718 aa24.43■■□□□ 1.5
NOTCH3-205ENST00000600841 DLC1Q96QB1 1528 aa24.43■■□□□ 1.5
NOTCH3-205ENST00000600841 SOCS7O14512 581 aa24.42■■□□□ 1.5
NOTCH3-205ENST00000600841 ESCO1Q5FWF5 840 aa24.41■■□□□ 1.5
NOTCH3-205ENST00000600841 POGKQ9P215 609 aa24.41■■□□□ 1.5
NOTCH3-205ENST00000600841 RGS17Q9UGC6 210 aaPredicted RBP24.41■■□□□ 1.5
NOTCH3-205ENST00000600841 SAFB2Q14151 953 aaKnown RBP eCLIP24.4■■□□□ 1.5
NOTCH3-205ENST00000600841 FMN2Q9NZ56 1722 aa24.4■■□□□ 1.5
NOTCH3-205ENST00000600841 NUTM2FA1L443 756 aa24.39■■□□□ 1.49
NOTCH3-205ENST00000600841 TRAK1Q9UPV9 953 aa24.39■■□□□ 1.49
NOTCH3-205ENST00000600841 LRP6O75581 1613 aa24.39■■□□□ 1.49
NOTCH3-205ENST00000600841 MEX3CQ5U5Q3 659 aaKnown RBP24.38■■□□□ 1.49
NOTCH3-205ENST00000600841 SOS2Q07890 1332 aaPredicted RBP24.37■■□□□ 1.49
NOTCH3-205ENST00000600841 TRIM26Q12899 539 aaPredicted RBP24.36■■□□□ 1.49
NOTCH3-205ENST00000600841 NPHP3Q7Z494 1330 aa24.35■■□□□ 1.49
NOTCH3-205ENST00000600841 PNPLA6Q8IY17 1366 aa24.35■■□□□ 1.49
NOTCH3-205ENST00000600841 NUTM2BA6NNL0 878 aaPredicted RBP24.35■■□□□ 1.49
NOTCH3-205ENST00000600841 NUTM2EB1AL46 878 aaPredicted RBP24.35■■□□□ 1.49
NOTCH3-205ENST00000600841 NUTM2AQ8IVF1 878 aaPredicted RBP24.35■■□□□ 1.49
NOTCH3-205ENST00000600841 KIAA1210Q9ULL0 1709 aa24.34■■□□□ 1.49
NOTCH3-205ENST00000600841 FOXO3O43524 673 aa24.32■■□□□ 1.48
NOTCH3-205ENST00000600841 KIF1AQ12756 1690 aa24.31■■□□□ 1.48
NOTCH3-205ENST00000600841 ADGRB2O60241 1585 aa24.31■■□□□ 1.48
NOTCH3-205ENST00000600841 SIN3AQ96ST3 1273 aa24.31■■□□□ 1.48
NOTCH3-205ENST00000600841 RGPD8O14715 1765 aaPredicted RBP24.31■■□□□ 1.48
NOTCH3-205ENST00000600841 POTEAQ6S8J7 498 aa24.29■■□□□ 1.48
NOTCH3-205ENST00000600841 PXDNQ92626 1479 aa24.29■■□□□ 1.48
NOTCH3-205ENST00000600841 ARHGEF28Q8N1W1 1705 aaKnown RBP24.29■■□□□ 1.48
NOTCH3-205ENST00000600841 NEUROD1Q13562 356 aa24.28■■□□□ 1.48
NOTCH3-205ENST00000600841 L3MBTL2Q969R5 705 aa24.28■■□□□ 1.48
NOTCH3-205ENST00000600841 HIRIP3Q9BW71 556 aaPredicted RBP24.28■■□□□ 1.48
NOTCH3-205ENST00000600841 MINK1Q8N4C8 1332 aaPredicted RBP24.28■■□□□ 1.48
NOTCH3-205ENST00000600841 XPCQ01831 940 aaPredicted RBP24.27■■□□□ 1.48
NOTCH3-205ENST00000600841 PHF8Q9UPP1 1060 aa24.26■■□□□ 1.47
NOTCH3-205ENST00000600841 ANKARQ7Z5J8 1434 aa24.26■■□□□ 1.47
NOTCH3-205ENST00000600841 EIF3AQ14152 1382 aaKnown RBP24.25■■□□□ 1.47
NOTCH3-205ENST00000600841 NBPF1Q3BBV0 1214 aa24.24■■□□□ 1.47
NOTCH3-205ENST00000600841 ZNF772Q68DY9 489 aaPredicted RBP24.24■■□□□ 1.47
NOTCH3-205ENST00000600841 USP32Q8NFA0 1604 aa24.23■■□□□ 1.47
NOTCH3-205ENST00000600841 COL22A1Q8NFW1 1626 aaPredicted RBP24.23■■□□□ 1.47
NOTCH3-205ENST00000600841 WASLO00401 505 aaPredicted RBP24.22■■□□□ 1.47
NOTCH3-205ENST00000600841 TULP4Q9NRJ4 1543 aa24.2■■□□□ 1.47
NOTCH3-205ENST00000600841 ADAMTS2O95450 1211 aa24.2■■□□□ 1.46
NOTCH3-205ENST00000600841 KRT28Q7Z3Y7 464 aa24.2■■□□□ 1.46
NOTCH3-205ENST00000600841 C8orf37Q96NL8 207 aa24.2■■□□□ 1.46
NOTCH3-205ENST00000600841 AFF2P51816 1311 aa24.19■■□□□ 1.46
NOTCH3-205ENST00000600841 PSME1Q06323 249 aa24.18■■□□□ 1.46
NOTCH3-205ENST00000600841 SPATA31A3Q5VYP0 1347 aa24.17■■□□□ 1.46
NOTCH3-205ENST00000600841 PMFBP1Q8TBY8 1022 aa24.17■■□□□ 1.46
NOTCH3-205ENST00000600841 PRR36Q9H6K5 1346 aa24.16■■□□□ 1.46
NOTCH3-205ENST00000600841 NGLY1Q96IV0 654 aa24.15■■□□□ 1.46
NOTCH3-205ENST00000600841 TRPM1Q7Z4N2 1603 aa24.14■■□□□ 1.46
NOTCH3-205ENST00000600841 TNS3Q68CZ2 1445 aa24.13■■□□□ 1.45
NOTCH3-205ENST00000600841 SBNO1A3KN83 1393 aa24.13■■□□□ 1.45
NOTCH3-205ENST00000600841 ITSN1Q15811 1721 aa24.12■■□□□ 1.45
NOTCH3-205ENST00000600841 CENPJQ9HC77 1338 aaPredicted RBP24.11■■□□□ 1.45
NOTCH3-205ENST00000600841 NUDT16Q96DE0 195 aaKnown RBP24.11■■□□□ 1.45
NOTCH3-205ENST00000600841 CDK19Q9BWU1 502 aa24.11■■□□□ 1.45
NOTCH3-205ENST00000600841 ROCK2O75116 1388 aaKnown RBP24.1■■□□□ 1.45
NOTCH3-205ENST00000600841 GPRASP1Q5JY77 1395 aa24.1■■□□□ 1.45
NOTCH3-205ENST00000600841 ATP7BP35670 1465 aa24.1■■□□□ 1.45
NOTCH3-205ENST00000600841 MARF1Q9Y4F3 1742 aaKnown RBP24.1■■□□□ 1.45
NOTCH3-205ENST00000600841 TONSLQ96HA7 1378 aa24.09■■□□□ 1.45
NOTCH3-205ENST00000600841 RXRBP28702 533 aa24.09■■□□□ 1.45
NOTCH3-205ENST00000600841 NGDNQ8NEJ9 315 aaKnown RBP24.09■■□□□ 1.45
NOTCH3-205ENST00000600841 ARHGEF10O15013 1369 aa24.08■■□□□ 1.45
NOTCH3-205ENST00000600841 LMOD2Q6P5Q4 547 aa24.08■■□□□ 1.45
NOTCH3-205ENST00000600841 QRICH2Q9H0J4 1663 aa24.08■■□□□ 1.44
NOTCH3-205ENST00000600841 FNBP4Q8N3X1 1017 aaPredicted RBP24.06■■□□□ 1.44
NOTCH3-205ENST00000600841 QTRT2Q9H974 415 aaKnown RBP24.06■■□□□ 1.44
NOTCH3-205ENST00000600841 USP21Q9UK80 565 aa24.06■■□□□ 1.44
NOTCH3-205ENST00000600841 TRPM3Q9HCF6 1732 aaPredicted RBP24.06■■□□□ 1.44
NOTCH3-205ENST00000600841 HAP1P54257 671 aaPredicted RBP24.05■■□□□ 1.44
NOTCH3-205ENST00000600841 NBPF8Q3BBV2 869 aa24.05■■□□□ 1.44
NOTCH3-205ENST00000600841 CCDC61Q9Y6R9 512 aa24.04■■□□□ 1.44
NOTCH3-205ENST00000600841 TOPAZ1Q8N9V7 1692 aa24.03■■□□□ 1.44
NOTCH3-205ENST00000600841 PLEKHG5O94827 1062 aa24.02■■□□□ 1.44
NOTCH3-205ENST00000600841 RBM6P78332 1123 aaKnown RBP24.02■■□□□ 1.44
NOTCH3-205ENST00000600841 SRPK2P78362 688 aaKnown RBP24.02■■□□□ 1.44
NOTCH3-205ENST00000600841 CDK12Q9NYV4 1490 aaPredicted RBP24.01■■□□□ 1.43
NOTCH3-205ENST00000600841 CABLES1Q8TDN4 633 aa24.01■■□□□ 1.43
NOTCH3-205ENST00000600841 TRPC5Q9UL62 973 aaPredicted RBP24.01■■□□□ 1.43
NOTCH3-205ENST00000600841 ALS2Q96Q42 1657 aa24.01■■□□□ 1.43
NOTCH3-205ENST00000600841 ABCA3Q99758 1704 aa24■■□□□ 1.43
NOTCH3-205ENST00000600841 PAK3O75914 559 aaPredicted RBP23.99■■□□□ 1.43
NOTCH3-205ENST00000600841 CABP2Q9NPB3 220 aa23.99■■□□□ 1.43
NOTCH3-205ENST00000600841 PLEKHG3A1L390 1219 aa23.98■■□□□ 1.43
NOTCH3-205ENST00000600841 ACEP12821 1306 aa23.98■■□□□ 1.43
NOTCH3-205ENST00000600841 POLR3AO14802 1390 aaPredicted RBP23.98■■□□□ 1.43
NOTCH3-205ENST00000600841 ATRNO75882 1429 aa23.97■■□□□ 1.43
NOTCH3-205ENST00000600841 BCL9LQ86UU0 1499 aa23.97■■□□□ 1.43
NOTCH3-205ENST00000600841 RALGAPBQ86X10 1494 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms