RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 C9orf78Q9NZ63 289 aaPredicted RBP18.39■□□□□ 0.53
SYMPK-213ENST00000599460 NUDT16Q96DE0 195 aaKnown RBP18.39■□□□□ 0.53
SYMPK-213ENST00000599460 RPRD2Q5VT52 1461 aaKnown RBP18.39■□□□□ 0.53
SYMPK-213ENST00000599460 TRIM44Q96DX7 344 aaPredicted RBP18.37■□□□□ 0.53
SYMPK-213ENST00000599460 CDCA7LQ96GN5 454 aa18.37■□□□□ 0.53
SYMPK-213ENST00000599460 GAS2L2Q8NHY3 880 aa18.37■□□□□ 0.53
SYMPK-213ENST00000599460 DUOX2Q9NRD8 1548 aa18.37■□□□□ 0.53
SYMPK-213ENST00000599460 KIF16BQ96L93 1317 aa18.37■□□□□ 0.53
SYMPK-213ENST00000599460 DDX58O95786 925 aaKnown RBP18.37■□□□□ 0.53
SYMPK-213ENST00000599460 DISP1Q96F81 1524 aa18.36■□□□□ 0.53
SYMPK-213ENST00000599460 NOS1P29475 1434 aa18.36■□□□□ 0.53
SYMPK-213ENST00000599460 CFAP43Q8NDM7 1665 aa18.36■□□□□ 0.53
SYMPK-213ENST00000599460 TEX14Q8IWB6 1497 aa18.36■□□□□ 0.53
SYMPK-213ENST00000599460 SMG6Q86US8 1419 aaKnown RBP18.36■□□□□ 0.53
SYMPK-213ENST00000599460 NSD3Q9BZ95 1437 aa18.36■□□□□ 0.53
SYMPK-213ENST00000599460 USP35Q9P2H5 1018 aa18.35■□□□□ 0.53
SYMPK-213ENST00000599460 CCDC61Q9Y6R9 512 aa18.35■□□□□ 0.53
SYMPK-213ENST00000599460 GOLGA6L4A6NEF3 574 aa18.35■□□□□ 0.53
SYMPK-213ENST00000599460 ISY1Q9ULR0 285 aaKnown RBP18.35■□□□□ 0.53
SYMPK-213ENST00000599460 TRAPPC8Q9Y2L5 1435 aa18.35■□□□□ 0.53
SYMPK-213ENST00000599460 ZNF518AQ6AHZ1 1483 aa18.34■□□□□ 0.53
SYMPK-213ENST00000599460 SULT6B1Q6IMI4 303 aa18.34■□□□□ 0.53
SYMPK-213ENST00000599460 PLEKHO1Q53GL0 409 aaPredicted RBP18.34■□□□□ 0.53
SYMPK-213ENST00000599460 RRS1Q15050 365 aaKnown RBP18.33■□□□□ 0.53
SYMPK-213ENST00000599460 PNISRQ8TF01 805 aaKnown RBP18.33■□□□□ 0.53
SYMPK-213ENST00000599460 C11orf95C9JLR9 678 aaPredicted RBP18.33■□□□□ 0.53
SYMPK-213ENST00000599460 A2MP01023 1474 aa18.33■□□□□ 0.52
SYMPK-213ENST00000599460 XPCQ01831 940 aaPredicted RBP18.32■□□□□ 0.52
SYMPK-213ENST00000599460 STRN4Q9NRL3 753 aa18.32■□□□□ 0.52
SYMPK-213ENST00000599460 RILPL2Q969X0 211 aa18.32■□□□□ 0.52
SYMPK-213ENST00000599460 TCOF1Q13428 1488 aaKnown RBP18.32■□□□□ 0.52
SYMPK-213ENST00000599460 FRAT2O75474 233 aaPredicted RBP18.32■□□□□ 0.52
SYMPK-213ENST00000599460 PTMAP06454 111 aaKnown RBP18.32■□□□□ 0.52
SYMPK-213ENST00000599460 ABCC2Q92887 1545 aa18.32■□□□□ 0.52
SYMPK-213ENST00000599460 PANK1Q8TE04 598 aa18.31■□□□□ 0.52
SYMPK-213ENST00000599460 G3V3G9 751 aa18.31■□□□□ 0.52
SYMPK-213ENST00000599460 DCAF8Q5TAQ9 597 aa18.31■□□□□ 0.52
SYMPK-213ENST00000599460 SLKQ9H2G2 1235 aaPredicted RBP18.31■□□□□ 0.52
SYMPK-213ENST00000599460 TSHZ2Q9NRE2 1034 aa18.31■□□□□ 0.52
SYMPK-213ENST00000599460 CCDC184Q52MB2 194 aa18.31■□□□□ 0.52
SYMPK-213ENST00000599460 MSH5O43196 834 aa18.3■□□□□ 0.52
SYMPK-213ENST00000599460 AMOTL2Q9Y2J4 779 aa18.3■□□□□ 0.52
SYMPK-213ENST00000599460 CDK11BP21127 795 aaKnown RBP18.3■□□□□ 0.52
SYMPK-213ENST00000599460 AIMP1Q12904 312 aaKnown RBP18.3■□□□□ 0.52
SYMPK-213ENST00000599460 EXOSC9Q06265 439 aaKnown RBP18.29■□□□□ 0.52
SYMPK-213ENST00000599460 GNL2Q13823 731 aaKnown RBP18.29■□□□□ 0.52
SYMPK-213ENST00000599460 C14orf93Q9H972 538 aaKnown RBP18.29■□□□□ 0.52
SYMPK-213ENST00000599460 PLCB2Q00722 1185 aa18.28■□□□□ 0.52
SYMPK-213ENST00000599460 SCAF11Q99590 1463 aaKnown RBP18.28■□□□□ 0.52
SYMPK-213ENST00000599460 TATP17735 454 aaPredicted RBP18.28■□□□□ 0.52
SYMPK-213ENST00000599460 TULP1O00294 542 aaPredicted RBP18.28■□□□□ 0.52
SYMPK-213ENST00000599460 RIC3Q7Z5B4 369 aa18.28■□□□□ 0.52
SYMPK-213ENST00000599460 CEP170Q5SW79 1584 aa18.27■□□□□ 0.52
SYMPK-213ENST00000599460 FAM161AQ3B820 660 aa18.27■□□□□ 0.52
SYMPK-213ENST00000599460 TSR2Q969E8 191 aaKnown RBP18.27■□□□□ 0.51
SYMPK-213ENST00000599460 TNRQ92752 1358 aa18.26■□□□□ 0.51
SYMPK-213ENST00000599460 HSP90B1P14625 803 aaKnown RBP18.26■□□□□ 0.51
SYMPK-213ENST00000599460 TARBP1Q13395 1621 aaKnown RBP18.26■□□□□ 0.51
SYMPK-213ENST00000599460 NOL8Q76FK4 1167 aaKnown RBP18.26■□□□□ 0.51
SYMPK-213ENST00000599460 PDE4AP27815 886 aa18.25■□□□□ 0.51
SYMPK-213ENST00000599460 CCDC30Q5VVM6 783 aa18.25■□□□□ 0.51
SYMPK-213ENST00000599460 WASLO00401 505 aaPredicted RBP18.25■□□□□ 0.51
SYMPK-213ENST00000599460 TWISTNBQ3B726 338 aaPredicted RBP18.25■□□□□ 0.51
SYMPK-213ENST00000599460 TOM1L2Q6ZVM7 507 aa18.25■□□□□ 0.51
SYMPK-213ENST00000599460 ABCC10Q5T3U5 1492 aa18.24■□□□□ 0.51
SYMPK-213ENST00000599460 RBM33Q96EV2 1170 aaKnown RBP18.24■□□□□ 0.51
SYMPK-213ENST00000599460 NUTM2BA6NNL0 878 aaPredicted RBP18.23■□□□□ 0.51
SYMPK-213ENST00000599460 NUTM2EB1AL46 878 aaPredicted RBP18.23■□□□□ 0.51
SYMPK-213ENST00000599460 NUTM2AQ8IVF1 878 aaPredicted RBP18.23■□□□□ 0.51
SYMPK-213ENST00000599460 IPO9Q96P70 1041 aaKnown RBP18.23■□□□□ 0.51
SYMPK-213ENST00000599460 IFIT2P09913 472 aaKnown RBP18.23■□□□□ 0.51
SYMPK-213ENST00000599460 G3BP1Q13283 466 aaKnown RBP eCLIP18.22■□□□□ 0.51
SYMPK-213ENST00000599460 ZNF530Q6P9A1 599 aaPredicted RBP18.22■□□□□ 0.51
SYMPK-213ENST00000599460 MAPKBP1O60336 1514 aa18.22■□□□□ 0.51
SYMPK-213ENST00000599460 GBP4Q96PP9 640 aa18.22■□□□□ 0.51
SYMPK-213ENST00000599460 PRDM11Q9NQV5 511 aa18.22■□□□□ 0.51
SYMPK-213ENST00000599460 FOXD4L1Q9NU39 408 aa18.21■□□□□ 0.51
SYMPK-213ENST00000599460 NME9Q86XW9 330 aa18.21■□□□□ 0.51
SYMPK-213ENST00000599460 WDR63Q8IWG1 891 aa18.21■□□□□ 0.51
SYMPK-213ENST00000599460 FCHSD2O94868 740 aa18.21■□□□□ 0.51
SYMPK-213ENST00000599460 ZC3H6P61129 1189 aaKnown RBP18.21■□□□□ 0.51
SYMPK-213ENST00000599460 TOMM22Q9NS69 142 aa18.21■□□□□ 0.51
SYMPK-213ENST00000599460 SAMD9Q5K651 1589 aa18.2■□□□□ 0.5
SYMPK-213ENST00000599460 ST18O60284 1047 aa18.2■□□□□ 0.5
SYMPK-213ENST00000599460 SHANK2Q9UPX8 1470 aa18.2■□□□□ 0.5
SYMPK-213ENST00000599460 UBTFL1P0CB47 393 aaPredicted RBP18.2■□□□□ 0.5
SYMPK-213ENST00000599460 PIP4K2BP78356 416 aa18.2■□□□□ 0.5
SYMPK-213ENST00000599460 AAMPQ13685 434 aa18.2■□□□□ 0.5
SYMPK-213ENST00000599460 DIAPH3Q9NSV4 1193 aa18.2■□□□□ 0.5
SYMPK-213ENST00000599460 SPG7Q9UQ90 795 aa18.19■□□□□ 0.5
SYMPK-213ENST00000599460 DISP3Q9P2K9 1392 aa18.19■□□□□ 0.5
SYMPK-213ENST00000599460 KCNH5Q8NCM2 988 aa18.19■□□□□ 0.5
SYMPK-213ENST00000599460 RBM42Q9BTD8 480 aaKnown RBP18.19■□□□□ 0.5
SYMPK-213ENST00000599460 DDX54Q8TDD1 881 aaKnown RBP18.19■□□□□ 0.5
SYMPK-213ENST00000599460 BCAR3O75815 825 aa18.18■□□□□ 0.5
SYMPK-213ENST00000599460 PHF8Q9UPP1 1060 aa18.18■□□□□ 0.5
SYMPK-213ENST00000599460 NOB1Q9ULX3 412 aaKnown RBP18.18■□□□□ 0.5
SYMPK-213ENST00000599460 LNPKQ9C0E8 428 aa18.18■□□□□ 0.5
SYMPK-213ENST00000599460 CABP4P57796 275 aa18.17■□□□□ 0.5
SYMPK-213ENST00000599460 HSP90AB4PQ58FF6 505 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms