RNA–Protein interactions for RNA: ENST00000597315.5

BRD4-208, Transcript of bromodomain containing 4, humanhuman

TSL 5

Gene BRD4, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-208ENST00000597315 NEUROD1Q13562 356 aa38.91■■■■□ 3.82
BRD4-208ENST00000597315 AHDC1Q5TGY3 1603 aaPredicted RBP38.91■■■■□ 3.82
BRD4-208ENST00000597315 SIN3AQ96ST3 1273 aa38.89■■■■□ 3.82
BRD4-208ENST00000597315 JCADQ9P266 1359 aa38.89■■■■□ 3.82
BRD4-208ENST00000597315 CDC42BPGQ6DT37 1551 aa38.89■■■■□ 3.82
BRD4-208ENST00000597315 PRAM1Q96QH2 718 aa38.88■■■■□ 3.81
BRD4-208ENST00000597315 TRAK1Q9UPV9 953 aa38.88■■■■□ 3.81
BRD4-208ENST00000597315 SAFB2Q14151 953 aaKnown RBP eCLIP38.86■■■■□ 3.81
BRD4-208ENST00000597315 ADGRB1O14514 1584 aa38.86■■■■□ 3.81
BRD4-208ENST00000597315 COL16A1Q07092 1604 aaPredicted RBP38.85■■■■□ 3.81
BRD4-208ENST00000597315 DLC1Q96QB1 1528 aa38.84■■■■□ 3.81
BRD4-208ENST00000597315 ORAI2Q96SN7 254 aa38.82■■■■□ 3.8
BRD4-208ENST00000597315 ESCO1Q5FWF5 840 aa38.81■■■■□ 3.8
BRD4-208ENST00000597315 NUTM2FA1L443 756 aa38.8■■■■□ 3.8
BRD4-208ENST00000597315 L3MBTL2Q969R5 705 aa38.8■■■■□ 3.8
BRD4-208ENST00000597315 LRRC59Q96AG4 307 aaKnown RBP38.77■■■■□ 3.8
BRD4-208ENST00000597315 NHSL1Q5SYE7 1610 aa38.77■■■■□ 3.8
BRD4-208ENST00000597315 DDX17Q92841 729 aaKnown RBP38.76■■■■□ 3.8
BRD4-208ENST00000597315 KIAA1210Q9ULL0 1709 aa38.72■■■■□ 3.79
BRD4-208ENST00000597315 SPATA31A6Q5VVP1 1343 aa38.72■■■■□ 3.79
BRD4-208ENST00000597315 FMN2Q9NZ56 1722 aa38.69■■■■□ 3.78
BRD4-208ENST00000597315 NPHP3Q7Z494 1330 aa38.68■■■■□ 3.78
BRD4-208ENST00000597315 MINK1Q8N4C8 1332 aaPredicted RBP38.67■■■■□ 3.78
BRD4-208ENST00000597315 SHPRHQ149N8 1683 aa38.66■■■■□ 3.78
BRD4-208ENST00000597315 MEX3CQ5U5Q3 659 aaKnown RBP38.66■■■■□ 3.78
BRD4-208ENST00000597315 HIRIP3Q9BW71 556 aaPredicted RBP38.66■■■■□ 3.78
BRD4-208ENST00000597315 NBPF1Q3BBV0 1214 aa38.64■■■■□ 3.78
BRD4-208ENST00000597315 SOS2Q07890 1332 aaPredicted RBP38.63■■■■□ 3.77
BRD4-208ENST00000597315 FOXO3O43524 673 aa38.62■■■■□ 3.77
BRD4-208ENST00000597315 TONSLQ96HA7 1378 aa38.61■■■■□ 3.77
BRD4-208ENST00000597315 NUTM2BA6NNL0 878 aaPredicted RBP38.61■■■■□ 3.77
BRD4-208ENST00000597315 NUTM2EB1AL46 878 aaPredicted RBP38.61■■■■□ 3.77
BRD4-208ENST00000597315 NUTM2AQ8IVF1 878 aaPredicted RBP38.61■■■■□ 3.77
BRD4-208ENST00000597315 EIF3AQ14152 1382 aaKnown RBP38.6■■■■□ 3.77
BRD4-208ENST00000597315 ARHGEF28Q8N1W1 1705 aaKnown RBP38.6■■■■□ 3.77
BRD4-208ENST00000597315 ADGRB2O60241 1585 aa38.59■■■■□ 3.77
BRD4-208ENST00000597315 PCGF6Q9BYE7 350 aa38.58■■■■□ 3.77
BRD4-208ENST00000597315 PHF8Q9UPP1 1060 aa38.56■■■■□ 3.76
BRD4-208ENST00000597315 KIF1AQ12756 1690 aa38.55■■■■□ 3.76
BRD4-208ENST00000597315 WASLO00401 505 aaPredicted RBP38.55■■■■□ 3.76
BRD4-208ENST00000597315 PNPLA6Q8IY17 1366 aa38.55■■■■□ 3.76
BRD4-208ENST00000597315 ANKARQ7Z5J8 1434 aa38.55■■■■□ 3.76
BRD4-208ENST00000597315 XPCQ01831 940 aaPredicted RBP38.54■■■■□ 3.76
BRD4-208ENST00000597315 ROCK2O75116 1388 aaKnown RBP38.51■■■■□ 3.76
BRD4-208ENST00000597315 LRP6O75581 1613 aa38.5■■■■□ 3.75
BRD4-208ENST00000597315 RGPD8O14715 1765 aaPredicted RBP38.49■■■■□ 3.75
BRD4-208ENST00000597315 CENPJQ9HC77 1338 aaPredicted RBP38.47■■■■□ 3.75
BRD4-208ENST00000597315 PSME1Q06323 249 aa38.47■■■■□ 3.75
BRD4-208ENST00000597315 KRT28Q7Z3Y7 464 aa38.47■■■■□ 3.75
BRD4-208ENST00000597315 TRPM1Q7Z4N2 1603 aa38.47■■■■□ 3.75
BRD4-208ENST00000597315 PXDNQ92626 1479 aa38.47■■■■□ 3.75
BRD4-208ENST00000597315 TULP4Q9NRJ4 1543 aa38.46■■■■□ 3.75
BRD4-208ENST00000597315 PMFBP1Q8TBY8 1022 aa38.45■■■■□ 3.75
BRD4-208ENST00000597315 RGS17Q9UGC6 210 aaPredicted RBP38.45■■■■□ 3.75
BRD4-208ENST00000597315 CDK19Q9BWU1 502 aa38.41■■■■□ 3.74
BRD4-208ENST00000597315 USP32Q8NFA0 1604 aa38.41■■■■□ 3.74
BRD4-208ENST00000597315 NBPF8Q3BBV2 869 aa38.4■■■■□ 3.74
BRD4-208ENST00000597315 PRR36Q9H6K5 1346 aa38.38■■■■□ 3.74
BRD4-208ENST00000597315 ZNF772Q68DY9 489 aaPredicted RBP38.38■■■■□ 3.73
BRD4-208ENST00000597315 NUDT16Q96DE0 195 aaKnown RBP38.37■■■■□ 3.73
BRD4-208ENST00000597315 GPRASP1Q5JY77 1395 aa38.36■■■■□ 3.73
BRD4-208ENST00000597315 ADAMTS2O95450 1211 aa38.36■■■■□ 3.73
BRD4-208ENST00000597315 NGDNQ8NEJ9 315 aaKnown RBP38.36■■■■□ 3.73
BRD4-208ENST00000597315 SPATA31A3Q5VYP0 1347 aa38.36■■■■□ 3.73
BRD4-208ENST00000597315 C8orf37Q96NL8 207 aa38.35■■■■□ 3.73
BRD4-208ENST00000597315 LMOD2Q6P5Q4 547 aa38.34■■■■□ 3.73
BRD4-208ENST00000597315 SRPK2P78362 688 aaKnown RBP38.33■■■■□ 3.73
BRD4-208ENST00000597315 POTEAQ6S8J7 498 aa38.33■■■■□ 3.73
BRD4-208ENST00000597315 CARD11Q9BXL7 1154 aa38.32■■■■□ 3.72
BRD4-208ENST00000597315 COL22A1Q8NFW1 1626 aaPredicted RBP38.31■■■■□ 3.72
BRD4-208ENST00000597315 QRICH2Q9H0J4 1663 aa38.3■■■■□ 3.72
BRD4-208ENST00000597315 ITSN1Q15811 1721 aa38.3■■■■□ 3.72
BRD4-208ENST00000597315 SBNO1A3KN83 1393 aa38.3■■■■□ 3.72
BRD4-208ENST00000597315 TNS3Q68CZ2 1445 aa38.29■■■■□ 3.72
BRD4-208ENST00000597315 ATP7BP35670 1465 aa38.29■■■■□ 3.72
BRD4-208ENST00000597315 NGLY1Q96IV0 654 aa38.29■■■■□ 3.72
BRD4-208ENST00000597315 HAP1P54257 671 aaPredicted RBP38.28■■■■□ 3.72
BRD4-208ENST00000597315 AFF2P51816 1311 aa38.28■■■■□ 3.72
BRD4-208ENST00000597315 CCDC61Q9Y6R9 512 aa38.27■■■■□ 3.72
BRD4-208ENST00000597315 CLSPNQ9HAW4 1339 aa38.27■■■■□ 3.72
BRD4-208ENST00000597315 ARHGEF10O15013 1369 aa38.25■■■■□ 3.71
BRD4-208ENST00000597315 RALGAPBQ86X10 1494 aa38.24■■■■□ 3.71
BRD4-208ENST00000597315 EVC2Q86UK5 1308 aa38.23■■■■□ 3.71
BRD4-208ENST00000597315 CABP2Q9NPB3 220 aa38.22■■■■□ 3.71
BRD4-208ENST00000597315 PAK3O75914 559 aaPredicted RBP38.21■■■■□ 3.71
BRD4-208ENST00000597315 PLEKHG5O94827 1062 aa38.21■■■■□ 3.71
BRD4-208ENST00000597315 CCER1Q8TC90 406 aaPredicted RBP38.18■■■■□ 3.7
BRD4-208ENST00000597315 ACEP12821 1306 aa38.14■■■■□ 3.7
BRD4-208ENST00000597315 PLEKHG3A1L390 1219 aa38.14■■■■□ 3.7
BRD4-208ENST00000597315 TIMELESSQ9UNS1 1208 aa38.14■■■■□ 3.7
BRD4-208ENST00000597315 TOPAZ1Q8N9V7 1692 aa38.14■■■■□ 3.7
BRD4-208ENST00000597315 PPIP5K1Q6PFW1 1433 aa38.13■■■■□ 3.7
BRD4-208ENST00000597315 RXRBP28702 533 aa38.13■■■■□ 3.69
BRD4-208ENST00000597315 USP21Q9UK80 565 aa38.13■■■■□ 3.69
BRD4-208ENST00000597315 CABLES1Q8TDN4 633 aa38.12■■■■□ 3.69
BRD4-208ENST00000597315 QTRT2Q9H974 415 aaKnown RBP38.11■■■■□ 3.69
BRD4-208ENST00000597315 TRPM3Q9HCF6 1732 aaPredicted RBP38.1■■■■□ 3.69
BRD4-208ENST00000597315 POLR3AO14802 1390 aaPredicted RBP38.1■■■■□ 3.69
BRD4-208ENST00000597315 FNBP4Q8N3X1 1017 aaPredicted RBP38.07■■■■□ 3.68
BRD4-208ENST00000597315 MARF1Q9Y4F3 1742 aaKnown RBP38.07■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms