RNA–Protein interactions for RNA: ENST00000589447.1

LINC01539-203, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-203ENST00000589447 POTEJP0CG39 1038 aa4.49□□□□□ -1.69
LINC01539-203ENST00000589447 MFAP1P55081 439 aaKnown RBP4.49□□□□□ -1.69
LINC01539-203ENST00000589447 EIF4G2P78344 907 aaKnown RBP eCLIP4.49□□□□□ -1.69
LINC01539-203ENST00000589447 IRX6P78412 446 aaPredicted RBP4.49□□□□□ -1.69
LINC01539-203ENST00000589447 SMYD5Q6GMV2 418 aa4.49□□□□□ -1.69
LINC01539-203ENST00000589447 IPO9Q96P70 1041 aaKnown RBP4.49□□□□□ -1.69
LINC01539-203ENST00000589447 HIRIP3Q9BW71 556 aaPredicted RBP4.49□□□□□ -1.69
LINC01539-203ENST00000589447 ABCC1P33527 1531 aa4.49□□□□□ -1.69
LINC01539-203ENST00000589447 SAMD9LQ8IVG5 1584 aa4.48□□□□□ -1.69
LINC01539-203ENST00000589447 INO80Q9ULG1 1556 aaPredicted RBP4.48□□□□□ -1.69
LINC01539-203ENST00000589447 MYO3AQ8NEV4 1616 aa4.48□□□□□ -1.69
LINC01539-203ENST00000589447 STK25O00506 426 aa4.48□□□□□ -1.69
LINC01539-203ENST00000589447 TRAK2O60296 914 aa4.48□□□□□ -1.69
LINC01539-203ENST00000589447 HSPA5P11021 654 aaKnown RBP4.48□□□□□ -1.69
LINC01539-203ENST00000589447 POTEGQ6S5H5 508 aa4.48□□□□□ -1.69
LINC01539-203ENST00000589447 PDCD7Q8N8D1 485 aaKnown RBP4.48□□□□□ -1.69
LINC01539-203ENST00000589447 KDM4CQ9H3R0 1056 aa4.48□□□□□ -1.69
LINC01539-203ENST00000589447 MRS2Q9HD23 443 aa4.48□□□□□ -1.69
LINC01539-203ENST00000589447 CCDC7Q96M83 1385 aa4.48□□□□□ -1.69
LINC01539-203ENST00000589447 FANCAO15360 1455 aa4.48□□□□□ -1.69
LINC01539-203ENST00000589447 CLTCQ00610 1675 aaKnown RBP4.48□□□□□ -1.69
LINC01539-203ENST00000589447 POGZQ7Z3K3 1410 aa4.47□□□□□ -1.69
LINC01539-203ENST00000589447 B4GALNT3Q6L9W6 998 aa4.47□□□□□ -1.69
LINC01539-203ENST00000589447 L3MBTL3Q96JM7 780 aaPredicted RBP4.47□□□□□ -1.69
LINC01539-203ENST00000589447 CCDC136Q96JN2 1154 aa4.47□□□□□ -1.69
LINC01539-203ENST00000589447 CHMP4AQ9BY43 222 aa4.47□□□□□ -1.69
LINC01539-203ENST00000589447 PRKRIP1Q9H875 184 aaPredicted RBP4.47□□□□□ -1.69
LINC01539-203ENST00000589447 GPBP1L1Q9HC44 474 aaPredicted RBP4.47□□□□□ -1.69
LINC01539-203ENST00000589447 PCDH10Q9P2E7 1040 aa4.47□□□□□ -1.69
LINC01539-203ENST00000589447 USP35Q9P2H5 1018 aa4.47□□□□□ -1.69
LINC01539-203ENST00000589447 MROH2AA6NES4 1674 aa4.47□□□□□ -1.69
LINC01539-203ENST00000589447 WASHC2AQ641Q2 1341 aa4.46□□□□□ -1.69
LINC01539-203ENST00000589447 MIA2Q96PC5 1412 aa4.46□□□□□ -1.69
LINC01539-203ENST00000589447 E9PCH4 1651 aa4.46□□□□□ -1.7
LINC01539-203ENST00000589447 PLXNC1O60486 1568 aa4.46□□□□□ -1.7
LINC01539-203ENST00000589447 REREQ9P2R6 1566 aa4.46□□□□□ -1.7
LINC01539-203ENST00000589447 RPRD2Q5VT52 1461 aaKnown RBP4.46□□□□□ -1.7
LINC01539-203ENST00000589447 PATL2C9JE40 543 aaKnown RBP4.46□□□□□ -1.7
LINC01539-203ENST00000589447 PPM1GO15355 546 aaPredicted RBP4.46□□□□□ -1.7
LINC01539-203ENST00000589447 ONECUT3O60422 494 aaPredicted RBP4.46□□□□□ -1.7
LINC01539-203ENST00000589447 RBM25P49756 843 aaKnown RBP4.46□□□□□ -1.7
LINC01539-203ENST00000589447 RSPH4AQ5TD94 716 aa4.46□□□□□ -1.7
LINC01539-203ENST00000589447 AEBP1Q8IUX7 1158 aa4.46□□□□□ -1.7
LINC01539-203ENST00000589447 ATP1B4Q9UN42 357 aaPredicted RBP4.46□□□□□ -1.7
LINC01539-203ENST00000589447 NUDCQ9Y266 331 aa4.46□□□□□ -1.7
LINC01539-203ENST00000589447 AMOTL2Q9Y2J4 779 aa4.46□□□□□ -1.7
LINC01539-203ENST00000589447 VIRMAQ69YN4 1812 aaKnown RBP4.46□□□□□ -1.7
LINC01539-203ENST00000589447 DNMT1P26358 1616 aaKnown RBP4.46□□□□□ -1.7
LINC01539-203ENST00000589447 STRCP1A6NGW2 1772 aa4.45□□□□□ -1.7
LINC01539-203ENST00000589447 CROCC2H7BZ55 1655 aa4.45□□□□□ -1.7
LINC01539-203ENST00000589447 ROCK2O75116 1388 aaKnown RBP4.45□□□□□ -1.7
LINC01539-203ENST00000589447 KTN1Q86UP2 1357 aaKnown RBP4.45□□□□□ -1.7
LINC01539-203ENST00000589447 RAPGEF3O95398 923 aa4.45□□□□□ -1.7
LINC01539-203ENST00000589447 C3orf67Q6ZVT6 689 aa4.45□□□□□ -1.7
LINC01539-203ENST00000589447 FAM9BQ8IZU0 186 aa4.45□□□□□ -1.7
LINC01539-203ENST00000589447 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.45□□□□□ -1.7
LINC01539-203ENST00000589447 SERPINA10Q9UK55 444 aa4.45□□□□□ -1.7
LINC01539-203ENST00000589447 SYCP2Q9BX26 1530 aa4.45□□□□□ -1.7
LINC01539-203ENST00000589447 PTPRKQ15262 1439 aa4.45□□□□□ -1.7
LINC01539-203ENST00000589447 RNF123Q5XPI4 1314 aa4.45□□□□□ -1.7
LINC01539-203ENST00000589447 TCERG1O14776 1098 aaKnown RBP4.44□□□□□ -1.7
LINC01539-203ENST00000589447 SEMA3EO15041 775 aa4.44□□□□□ -1.7
LINC01539-203ENST00000589447 SNPHO15079 494 aa4.44□□□□□ -1.7
LINC01539-203ENST00000589447 PDE4CQ08493 712 aa4.44□□□□□ -1.7
LINC01539-203ENST00000589447 DDRGK1Q96HY6 314 aa4.44□□□□□ -1.7
LINC01539-203ENST00000589447 GZF1Q9H116 711 aaPredicted RBP4.44□□□□□ -1.7
LINC01539-203ENST00000589447 CABP2Q9NPB3 220 aa4.44□□□□□ -1.7
LINC01539-203ENST00000589447 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.44□□□□□ -1.7
LINC01539-203ENST00000589447 ARHGAP5Q13017 1502 aa4.44□□□□□ -1.7
LINC01539-203ENST00000589447 XIRP1Q702N8 1843 aaKnown RBP4.44□□□□□ -1.7
LINC01539-203ENST00000589447 SPATA31D1Q6ZQQ2 1576 aa4.44□□□□□ -1.7
LINC01539-203ENST00000589447 ARID4BQ4LE39 1312 aaPredicted RBP4.44□□□□□ -1.7
LINC01539-203ENST00000589447 CEP152O94986 1710 aa4.43□□□□□ -1.7
LINC01539-203ENST00000589447 DENND4BO75064 1496 aaPredicted RBP4.43□□□□□ -1.7
LINC01539-203ENST00000589447 ROCK1Q13464 1354 aa4.43□□□□□ -1.7
LINC01539-203ENST00000589447 MS4A1P11836 297 aa4.43□□□□□ -1.7
LINC01539-203ENST00000589447 E2F4Q16254 413 aa4.43□□□□□ -1.7
LINC01539-203ENST00000589447 FOXD4L5Q5VV16 416 aaPredicted RBP4.43□□□□□ -1.7
LINC01539-203ENST00000589447 SLAIN1Q8ND83 568 aa4.43□□□□□ -1.7
LINC01539-203ENST00000589447 FOXD4L4Q8WXT5 416 aaPredicted RBP4.43□□□□□ -1.7
LINC01539-203ENST00000589447 TMEM121BQ9BXQ6 578 aaPredicted RBP4.43□□□□□ -1.7
LINC01539-203ENST00000589447 GOPCQ9HD26 462 aa4.43□□□□□ -1.7
LINC01539-203ENST00000589447 NEURL4Q96JN8 1562 aa4.43□□□□□ -1.7
LINC01539-203ENST00000589447 MBD5Q9P267 1494 aa4.43□□□□□ -1.7
LINC01539-203ENST00000589447 LTBP4Q8N2S1 1624 aa4.43□□□□□ -1.7
LINC01539-203ENST00000589447 ALKQ9UM73 1620 aa4.43□□□□□ -1.7
LINC01539-203ENST00000589447 C11orf95C9JLR9 678 aaPredicted RBP4.42□□□□□ -1.7
LINC01539-203ENST00000589447 G3V3G9 751 aa4.42□□□□□ -1.7
LINC01539-203ENST00000589447 PDE4DQ08499 809 aa4.42□□□□□ -1.7
LINC01539-203ENST00000589447 SPATA31E1Q6ZUB1 1445 aa4.42□□□□□ -1.7
LINC01539-203ENST00000589447 CADPS2Q86UW7 1296 aa4.42□□□□□ -1.7
LINC01539-203ENST00000589447 PLEKHH2Q8IVE3 1493 aa4.42□□□□□ -1.7
LINC01539-203ENST00000589447 KIF7Q2M1P5 1343 aa4.42□□□□□ -1.7
LINC01539-203ENST00000589447 C9orf84Q5VXU9 1444 aa4.41□□□□□ -1.7
LINC01539-203ENST00000589447 TRIM66O15016 1216 aa4.41□□□□□ -1.7
LINC01539-203ENST00000589447 SOX12O15370 315 aa4.41□□□□□ -1.7
LINC01539-203ENST00000589447 BRD2P25440 801 aaKnown RBP4.41□□□□□ -1.7
LINC01539-203ENST00000589447 CANXP27824 592 aaKnown RBP4.41□□□□□ -1.7
LINC01539-203ENST00000589447 HSPA2P54652 639 aa4.41□□□□□ -1.7
LINC01539-203ENST00000589447 MROH1Q8NDA8 1641 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms