RNA–Protein interactions for RNA: ENST00000588831.5

LRFN3-204, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRFN3, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-204ENST00000588831 GGNBP2Q9H3C7 697 aa15.3■□□□□ 0.04
LRFN3-204ENST00000588831 CABP2Q9NPB3 220 aa15.29■□□□□ 0.04
LRFN3-204ENST00000588831 TBC1D2Q9BYX2 928 aa15.29■□□□□ 0.04
LRFN3-204ENST00000588831 SCAPERQ9BY12 1400 aa15.29■□□□□ 0.04
LRFN3-204ENST00000588831 CBX1P83916 185 aa15.28■□□□□ 0.04
LRFN3-204ENST00000588831 CALD1Q05682 793 aaKnown RBP15.28■□□□□ 0.04
LRFN3-204ENST00000588831 PLA2R1Q13018 1463 aa15.28■□□□□ 0.04
LRFN3-204ENST00000588831 NUP160Q12769 1436 aa15.28■□□□□ 0.04
LRFN3-204ENST00000588831 CGNQ9P2M7 1197 aaKnown RBP15.28■□□□□ 0.04
LRFN3-204ENST00000588831 SRPK2P78362 688 aaKnown RBP15.27■□□□□ 0.03
LRFN3-204ENST00000588831 COL17A1Q9UMD9 1497 aaPredicted RBP15.26■□□□□ 0.03
LRFN3-204ENST00000588831 CGNL1Q0VF96 1302 aa15.26■□□□□ 0.03
LRFN3-204ENST00000588831 SYCP2Q9BX26 1530 aa15.26■□□□□ 0.03
LRFN3-204ENST00000588831 PLCB2Q00722 1185 aa15.26■□□□□ 0.03
LRFN3-204ENST00000588831 RARSP54136 660 aaKnown RBP15.26■□□□□ 0.03
LRFN3-204ENST00000588831 EXOSC9Q06265 439 aaKnown RBP15.26■□□□□ 0.03
LRFN3-204ENST00000588831 KLHL34Q8N239 644 aa15.25■□□□□ 0.03
LRFN3-204ENST00000588831 TNNT3P45378 269 aaPredicted RBP15.25■□□□□ 0.03
LRFN3-204ENST00000588831 SOX12O15370 315 aa15.24■□□□□ 0.03
LRFN3-204ENST00000588831 BLMP54132 1417 aaPredicted RBP15.24■□□□□ 0.03
LRFN3-204ENST00000588831 MPNDQ8N594 471 aa15.24■□□□□ 0.03
LRFN3-204ENST00000588831 THUMPD2Q9BTF0 503 aaKnown RBP15.24■□□□□ 0.03
LRFN3-204ENST00000588831 RWDD1Q9H446 243 aaPredicted RBP15.24■□□□□ 0.03
LRFN3-204ENST00000588831 USP19O94966 1318 aa15.24■□□□□ 0.03
LRFN3-204ENST00000588831 FOXD4L5Q5VV16 416 aaPredicted RBP15.24■□□□□ 0.03
LRFN3-204ENST00000588831 DHX37Q8IY37 1157 aaKnown RBP15.24■□□□□ 0.03
LRFN3-204ENST00000588831 FOXD4L4Q8WXT5 416 aaPredicted RBP15.24■□□□□ 0.03
LRFN3-204ENST00000588831 UQCRHLA0A096LP55 91 aa15.23■□□□□ 0.03
LRFN3-204ENST00000588831 UQCRHP07919 91 aa15.23■□□□□ 0.03
LRFN3-204ENST00000588831 CFAP65Q6ZU64 1925 aaKnown RBP15.23■□□□□ 0.03
LRFN3-204ENST00000588831 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.23■□□□□ 0.03
LRFN3-204ENST00000588831 CFAP53Q96M91 514 aa15.23■□□□□ 0.03
LRFN3-204ENST00000588831 C22orf23Q9BZE7 217 aa15.23■□□□□ 0.03
LRFN3-204ENST00000588831 POLR1AO95602 1720 aaPredicted RBP15.23■□□□□ 0.03
LRFN3-204ENST00000588831 ADGRL2O95490 1459 aa15.23■□□□□ 0.03
LRFN3-204ENST00000588831 NKTRP30414 1462 aaKnown RBP15.23■□□□□ 0.03
LRFN3-204ENST00000588831 CYB5RLQ6IPT4 315 aa15.22■□□□□ 0.03
LRFN3-204ENST00000588831 ZMYM4Q5VZL5 1548 aa15.22■□□□□ 0.03
LRFN3-204ENST00000588831 RAPGEF3O95398 923 aa15.22■□□□□ 0.03
LRFN3-204ENST00000588831 HSP90AB1P08238 724 aaKnown RBP15.22■□□□□ 0.03
LRFN3-204ENST00000588831 TRAK2O60296 914 aa15.22■□□□□ 0.03
LRFN3-204ENST00000588831 MRE11P49959 708 aa15.22■□□□□ 0.03
LRFN3-204ENST00000588831 TRERF1Q96PN7 1200 aa15.22■□□□□ 0.03
LRFN3-204ENST00000588831 MAPK8IP3Q9UPT6 1336 aa15.21■□□□□ 0.03
LRFN3-204ENST00000588831 PMFBP1Q8TBY8 1022 aa15.21■□□□□ 0.03
LRFN3-204ENST00000588831 RUNDC1Q96C34 613 aa15.21■□□□□ 0.03
LRFN3-204ENST00000588831 ZNF521Q96K83 1311 aa15.21■□□□□ 0.02
LRFN3-204ENST00000588831 ITSN2Q9NZM3 1697 aa15.2■□□□□ 0.02
LRFN3-204ENST00000588831 DZIP1LQ8IYY4 767 aaKnown RBP15.2■□□□□ 0.02
LRFN3-204ENST00000588831 MINK1Q8N4C8 1332 aaPredicted RBP15.2■□□□□ 0.02
LRFN3-204ENST00000588831 HMOX1P09601 288 aa15.2■□□□□ 0.02
LRFN3-204ENST00000588831 HSCBQ8IWL3 235 aa15.2■□□□□ 0.02
LRFN3-204ENST00000588831 KDM5DQ9BY66 1539 aa15.2■□□□□ 0.02
LRFN3-204ENST00000588831 APPP05067 770 aa15.2■□□□□ 0.02
LRFN3-204ENST00000588831 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.2■□□□□ 0.02
LRFN3-204ENST00000588831 CERS3Q8IU89 383 aa15.2■□□□□ 0.02
LRFN3-204ENST00000588831 GRPEL1Q9HAV7 217 aa15.2■□□□□ 0.02
LRFN3-204ENST00000588831 ARHGEF12Q9NZN5 1544 aa15.19■□□□□ 0.02
LRFN3-204ENST00000588831 ZKSCAN2Q63HK3 967 aa15.19■□□□□ 0.02
LRFN3-204ENST00000588831 NOB1Q9ULX3 412 aaKnown RBP15.19■□□□□ 0.02
LRFN3-204ENST00000588831 TRAPPC8Q9Y2L5 1435 aa15.19■□□□□ 0.02
LRFN3-204ENST00000588831 ADGBQ8N7X0 1667 aa15.19■□□□□ 0.02
LRFN3-204ENST00000588831 ANKRD45Q5TZF3 282 aa15.19■□□□□ 0.02
LRFN3-204ENST00000588831 NSD3Q9BZ95 1437 aa15.18■□□□□ 0.02
LRFN3-204ENST00000588831 PDE3AQ14432 1141 aa15.18■□□□□ 0.02
LRFN3-204ENST00000588831 FOXD4L6Q3SYB3 417 aaPredicted RBP15.18■□□□□ 0.02
LRFN3-204ENST00000588831 FOXD4L3Q6VB84 417 aaPredicted RBP15.18■□□□□ 0.02
LRFN3-204ENST00000588831 OSCARQ8IYS5 282 aa15.18■□□□□ 0.02
LRFN3-204ENST00000588831 RBM42Q9BTD8 480 aaKnown RBP15.18■□□□□ 0.02
LRFN3-204ENST00000588831 ESF1Q9H501 851 aaKnown RBP15.18■□□□□ 0.02
LRFN3-204ENST00000588831 XPCQ01831 940 aaPredicted RBP15.17■□□□□ 0.02
LRFN3-204ENST00000588831 MAP7D2Q96T17 732 aa15.17■□□□□ 0.02
LRFN3-204ENST00000588831 SSH1Q8WYL5 1049 aa15.17■□□□□ 0.02
LRFN3-204ENST00000588831 CDC42BPAQ5VT25 1732 aa15.17■□□□□ 0.02
LRFN3-204ENST00000588831 WDR7Q9Y4E6 1490 aa15.17■□□□□ 0.02
LRFN3-204ENST00000588831 RIPK4P57078 832 aa15.16■□□□□ 0.02
LRFN3-204ENST00000588831 NUTM2FA1L443 756 aa15.16■□□□□ 0.02
LRFN3-204ENST00000588831 NOL8Q76FK4 1167 aaKnown RBP15.16■□□□□ 0.02
LRFN3-204ENST00000588831 TMEM57Q8N5G2 664 aa15.16■□□□□ 0.02
LRFN3-204ENST00000588831 ABCC10Q5T3U5 1492 aa15.16■□□□□ 0.02
LRFN3-204ENST00000588831 GOLGA6L22H0YM25 854 aa15.15■□□□□ 0.02
LRFN3-204ENST00000588831 MCM4P33991 863 aa15.15■□□□□ 0.02
LRFN3-204ENST00000588831 HAP1P54257 671 aaPredicted RBP15.15■□□□□ 0.02
LRFN3-204ENST00000588831 SPDYE4A6NLX3 237 aa15.15■□□□□ 0.02
LRFN3-204ENST00000588831 TRIM27P14373 513 aa15.14■□□□□ 0.01
LRFN3-204ENST00000588831 TBC1D32Q96NH3 1257 aa15.14■□□□□ 0.01
LRFN3-204ENST00000588831 MVPQ14764 893 aaKnown RBP15.13■□□□□ 0.01
LRFN3-204ENST00000588831 EIF3AQ14152 1382 aaKnown RBP15.13■□□□□ 0.01
LRFN3-204ENST00000588831 PPP4R3BQ5MIZ7 849 aa15.13■□□□□ 0.01
LRFN3-204ENST00000588831 UGGT1Q9NYU2 1555 aa15.12■□□□□ 0.01
LRFN3-204ENST00000588831 GPRASP1Q5JY77 1395 aa15.12■□□□□ 0.01
LRFN3-204ENST00000588831 TRPM1Q7Z4N2 1603 aa15.12■□□□□ 0.01
LRFN3-204ENST00000588831 SAMD9LQ8IVG5 1584 aa15.11■□□□□ 0.01
LRFN3-204ENST00000588831 ASXL1Q8IXJ9 1541 aa15.11■□□□□ 0.01
LRFN3-204ENST00000588831 TRMT2AQ8IZ69 625 aaKnown RBP15.11■□□□□ 0.01
LRFN3-204ENST00000588831 ERCC6L2Q5T890 1561 aa15.11■□□□□ 0.01
LRFN3-204ENST00000588831 ZBTB22O15209 634 aa15.11■□□□□ 0.01
LRFN3-204ENST00000588831 GTF2E1P29083 439 aaPredicted RBP15.1■□□□□ 0.01
LRFN3-204ENST00000588831 FAM177BA6PVY3 158 aa15.1■□□□□ 0.01
LRFN3-204ENST00000588831 NASPP49321 788 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms