RNA–Protein interactions for RNA: ENST00000588534.1

ZNF554-202, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 4,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-202ENST00000588534 SLC12A5Q9H2X9 1139 aa9.75□□□□□ -0.85
ZNF554-202ENST00000588534 NSD2O96028 1365 aa9.75□□□□□ -0.85
ZNF554-202ENST00000588534 CHMP4BQ9H444 224 aaKnown RBP9.75□□□□□ -0.85
ZNF554-202ENST00000588534 DIAPH1O60610 1272 aaKnown RBP9.74□□□□□ -0.85
ZNF554-202ENST00000588534 WAPLQ7Z5K2 1190 aa9.74□□□□□ -0.85
ZNF554-202ENST00000588534 YTHDC2Q9H6S0 1430 aaKnown RBP9.74□□□□□ -0.85
ZNF554-202ENST00000588534 NLRP6P59044 892 aa9.74□□□□□ -0.85
ZNF554-202ENST00000588534 PLEKHG1Q9ULL1 1385 aa9.74□□□□□ -0.85
ZNF554-202ENST00000588534 KCNA6P17658 529 aa9.73□□□□□ -0.85
ZNF554-202ENST00000588534 ABCC11Q96J66 1382 aa9.73□□□□□ -0.85
ZNF554-202ENST00000588534 ARXQ96QS3 562 aa9.73□□□□□ -0.85
ZNF554-202ENST00000588534 MYH16Q9H6N6 1097 aa9.73□□□□□ -0.85
ZNF554-202ENST00000588534 PIK3R4Q99570 1358 aa9.73□□□□□ -0.85
ZNF554-202ENST00000588534 KIDINS220Q9ULH0 1771 aa9.72□□□□□ -0.85
ZNF554-202ENST00000588534 ABTB2Q8N961 1025 aa9.72□□□□□ -0.85
ZNF554-202ENST00000588534 MSH6P52701 1360 aa9.72□□□□□ -0.85
ZNF554-202ENST00000588534 NEUROD2Q15784 382 aa9.72□□□□□ -0.85
ZNF554-202ENST00000588534 KCNH5Q8NCM2 988 aa9.72□□□□□ -0.85
ZNF554-202ENST00000588534 PHF8Q9UPP1 1060 aa9.72□□□□□ -0.85
ZNF554-202ENST00000588534 PLA2R1Q13018 1463 aa9.72□□□□□ -0.85
ZNF554-202ENST00000588534 ZC3H13Q5T200 1668 aaKnown RBP9.71□□□□□ -0.85
ZNF554-202ENST00000588534 UGGT1Q9NYU2 1555 aa9.71□□□□□ -0.85
ZNF554-202ENST00000588534 SBNO2Q9Y2G9 1366 aa9.71□□□□□ -0.85
ZNF554-202ENST00000588534 REREQ9P2R6 1566 aa9.71□□□□□ -0.86
ZNF554-202ENST00000588534 GGNBP2Q9H3C7 697 aa9.71□□□□□ -0.86
ZNF554-202ENST00000588534 C19orf44Q9H6X5 657 aa9.71□□□□□ -0.86
ZNF554-202ENST00000588534 ABCA6Q8N139 1617 aa9.7□□□□□ -0.86
ZNF554-202ENST00000588534 PMFBP1Q8TBY8 1022 aa9.7□□□□□ -0.86
ZNF554-202ENST00000588534 TAOK2Q9UL54 1235 aa9.7□□□□□ -0.86
ZNF554-202ENST00000588534 GTF3C3Q9Y5Q9 886 aa9.7□□□□□ -0.86
ZNF554-202ENST00000588534 A2ML1A8K2U0 1454 aa9.69□□□□□ -0.86
ZNF554-202ENST00000588534 TTC21AQ8NDW8 1320 aa9.69□□□□□ -0.86
ZNF554-202ENST00000588534 RNF17Q9BXT8 1623 aaKnown RBP9.69□□□□□ -0.86
ZNF554-202ENST00000588534 PPP2R1AP30153 589 aa9.69□□□□□ -0.86
ZNF554-202ENST00000588534 TESK2Q96S53 571 aa9.69□□□□□ -0.86
ZNF554-202ENST00000588534 NSD3Q9BZ95 1437 aa9.68□□□□□ -0.86
ZNF554-202ENST00000588534 NCKAP5LQ9HCH0 1330 aa9.68□□□□□ -0.86
ZNF554-202ENST00000588534 EVA1CP58658 441 aa9.68□□□□□ -0.86
ZNF554-202ENST00000588534 GOLGA2Q08379 1002 aa9.68□□□□□ -0.86
ZNF554-202ENST00000588534 ANKRD36BQ8N2N9 1353 aa9.68□□□□□ -0.86
ZNF554-202ENST00000588534 KIF1BO60333 1816 aa9.68□□□□□ -0.86
ZNF554-202ENST00000588534 RUNDC1Q96C34 613 aa9.67□□□□□ -0.86
ZNF554-202ENST00000588534 KIF13AQ9H1H9 1805 aa9.67□□□□□ -0.86
ZNF554-202ENST00000588534 MTHFSP49914 203 aa9.67□□□□□ -0.86
ZNF554-202ENST00000588534 SMG6Q86US8 1419 aaKnown RBP9.67□□□□□ -0.86
ZNF554-202ENST00000588534 LAS1LQ9Y4W2 734 aaKnown RBP9.67□□□□□ -0.86
ZNF554-202ENST00000588534 PIK3C2GO75747 1445 aa9.66□□□□□ -0.86
ZNF554-202ENST00000588534 LTKP29376 864 aa9.66□□□□□ -0.86
ZNF554-202ENST00000588534 COL17A1Q9UMD9 1497 aaPredicted RBP9.66□□□□□ -0.86
ZNF554-202ENST00000588534 NPHP4O75161 1426 aaPredicted RBP9.66□□□□□ -0.86
ZNF554-202ENST00000588534 IPO8O15397 1037 aaKnown RBP9.66□□□□□ -0.86
ZNF554-202ENST00000588534 DISP3Q9P2K9 1392 aa9.66□□□□□ -0.86
ZNF554-202ENST00000588534 TOM1O60784 492 aa9.66□□□□□ -0.86
ZNF554-202ENST00000588534 NPHP3Q7Z494 1330 aa9.65□□□□□ -0.86
ZNF554-202ENST00000588534 C1orf141Q5JVX7 400 aa9.65□□□□□ -0.86
ZNF554-202ENST00000588534 SPHKAPQ2M3C7 1700 aa9.65□□□□□ -0.86
ZNF554-202ENST00000588534 CAMSAP1Q5T5Y3 1602 aa9.65□□□□□ -0.86
ZNF554-202ENST00000588534 ADGRB3O60242 1522 aa9.65□□□□□ -0.86
ZNF554-202ENST00000588534 FAM135BQ49AJ0 1406 aa9.65□□□□□ -0.86
ZNF554-202ENST00000588534 ZBED9Q6R2W3 1325 aa9.65□□□□□ -0.87
ZNF554-202ENST00000588534 A0A0G2JS52 829 aa9.65□□□□□ -0.87
ZNF554-202ENST00000588534 C11orf95C9JLR9 678 aaPredicted RBP9.65□□□□□ -0.87
ZNF554-202ENST00000588534 FKBP8Q14318 412 aa9.65□□□□□ -0.87
ZNF554-202ENST00000588534 LTV1Q96GA3 475 aaPredicted RBP9.65□□□□□ -0.87
ZNF554-202ENST00000588534 E9PSI1 815 aa9.64□□□□□ -0.87
ZNF554-202ENST00000588534 HSPA2P54652 639 aa9.64□□□□□ -0.87
ZNF554-202ENST00000588534 ERICH6BQ5W0A0 696 aa9.64□□□□□ -0.87
ZNF554-202ENST00000588534 NPC1L1Q9UHC9 1359 aa9.64□□□□□ -0.87
ZNF554-202ENST00000588534 VWDEQ8N2E2 1590 aa9.64□□□□□ -0.87
ZNF554-202ENST00000588534 RAPGEF4Q8WZA2 1011 aa9.64□□□□□ -0.87
ZNF554-202ENST00000588534 FTSJ3Q8IY81 847 aaKnown RBP9.64□□□□□ -0.87
ZNF554-202ENST00000588534 SYNMO15061 1565 aa9.63□□□□□ -0.87
ZNF554-202ENST00000588534 CCDC9Q9Y3X0 531 aaKnown RBP9.63□□□□□ -0.87
ZNF554-202ENST00000588534 ACEP12821 1306 aa9.63□□□□□ -0.87
ZNF554-202ENST00000588534 HOMEZQ8IX15 550 aa9.63□□□□□ -0.87
ZNF554-202ENST00000588534 GAS2L2Q8NHY3 880 aa9.63□□□□□ -0.87
ZNF554-202ENST00000588534 RICTORQ6R327 1708 aa9.63□□□□□ -0.87
ZNF554-202ENST00000588534 NEURL4Q96JN8 1562 aa9.63□□□□□ -0.87
ZNF554-202ENST00000588534 CLTCL1P53675 1640 aa9.62□□□□□ -0.87
ZNF554-202ENST00000588534 KRT28Q7Z3Y7 464 aa9.62□□□□□ -0.87
ZNF554-202ENST00000588534 PPIP5K1Q6PFW1 1433 aa9.62□□□□□ -0.87
ZNF554-202ENST00000588534 CCDC136Q96JN2 1154 aa9.62□□□□□ -0.87
ZNF554-202ENST00000588534 HDAC5Q9UQL6 1122 aa9.62□□□□□ -0.87
ZNF554-202ENST00000588534 DEPDC5O75140 1603 aa9.62□□□□□ -0.87
ZNF554-202ENST00000588534 E9PCH4 1651 aa9.62□□□□□ -0.87
ZNF554-202ENST00000588534 PPRC1Q5VV67 1664 aaKnown RBP9.62□□□□□ -0.87
ZNF554-202ENST00000588534 FCHSD2O94868 740 aa9.61□□□□□ -0.87
ZNF554-202ENST00000588534 PLEKHG3A1L390 1219 aa9.61□□□□□ -0.87
ZNF554-202ENST00000588534 PLEKHO1Q53GL0 409 aaPredicted RBP9.61□□□□□ -0.87
ZNF554-202ENST00000588534 FRMPD1Q5SYB0 1578 aa9.61□□□□□ -0.87
ZNF554-202ENST00000588534 TTC21BQ7Z4L5 1316 aa9.6□□□□□ -0.87
ZNF554-202ENST00000588534 FOXO3O43524 673 aa9.6□□□□□ -0.87
ZNF554-202ENST00000588534 ASXL1Q8IXJ9 1541 aa9.6□□□□□ -0.87
ZNF554-202ENST00000588534 TEFQ10587 303 aa9.6□□□□□ -0.87
ZNF554-202ENST00000588534 CCDC146Q8IYE0 955 aa9.6□□□□□ -0.87
ZNF554-202ENST00000588534 PHF23Q9BUL5 403 aaPredicted RBP9.6□□□□□ -0.87
ZNF554-202ENST00000588534 STK31Q9BXU1 1019 aa9.6□□□□□ -0.87
ZNF554-202ENST00000588534 CFAP65Q6ZU64 1925 aaKnown RBP9.6□□□□□ -0.87
ZNF554-202ENST00000588534 CEP152O94986 1710 aa9.6□□□□□ -0.87
ZNF554-202ENST00000588534 MEX3CQ5U5Q3 659 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 5662.5 ms