RNA–Protein interactions for RNA: ENST00000588269.1

PRKCSH-207, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-207ENST00000588269 TECPR2O15040 1411 aa17.06■□□□□ 0.32
PRKCSH-207ENST00000588269 PNPLA6Q8IY17 1366 aa17.06■□□□□ 0.32
PRKCSH-207ENST00000588269 LRPPRCP42704 1394 aaKnown RBP17.05■□□□□ 0.32
PRKCSH-207ENST00000588269 KNDC1Q76NI1 1749 aa17.05■□□□□ 0.32
PRKCSH-207ENST00000588269 C1orf167Q5SNV9 1468 aa17.05■□□□□ 0.32
PRKCSH-207ENST00000588269 ROBO2Q9HCK4 1378 aa17.04■□□□□ 0.32
PRKCSH-207ENST00000588269 ADAMTS2O95450 1211 aa17.04■□□□□ 0.32
PRKCSH-207ENST00000588269 TRIM26Q12899 539 aaPredicted RBP17.04■□□□□ 0.32
PRKCSH-207ENST00000588269 ORAI2Q96SN7 254 aa17.04■□□□□ 0.32
PRKCSH-207ENST00000588269 LRRC59Q96AG4 307 aaKnown RBP17.03■□□□□ 0.32
PRKCSH-207ENST00000588269 RGS12O14924 1447 aa17.03■□□□□ 0.32
PRKCSH-207ENST00000588269 DHX57Q6P158 1386 aaKnown RBP17.02■□□□□ 0.32
PRKCSH-207ENST00000588269 YTHDC2Q9H6S0 1430 aaKnown RBP17.02■□□□□ 0.31
PRKCSH-207ENST00000588269 ABCC11Q96J66 1382 aa17.02■□□□□ 0.31
PRKCSH-207ENST00000588269 DCAF11Q8TEB1 546 aa17.01■□□□□ 0.31
PRKCSH-207ENST00000588269 CDC42BPGQ6DT37 1551 aa17.01■□□□□ 0.31
PRKCSH-207ENST00000588269 C14orf93Q9H972 538 aaKnown RBP17■□□□□ 0.31
PRKCSH-207ENST00000588269 QTRT2Q9H974 415 aaKnown RBP17■□□□□ 0.31
PRKCSH-207ENST00000588269 STK26Q9P289 416 aa16.98■□□□□ 0.31
PRKCSH-207ENST00000588269 CDK12Q9NYV4 1490 aaPredicted RBP16.98■□□□□ 0.31
PRKCSH-207ENST00000588269 NGLY1Q96IV0 654 aa16.97■□□□□ 0.31
PRKCSH-207ENST00000588269 DLC1Q96QB1 1528 aa16.96■□□□□ 0.31
PRKCSH-207ENST00000588269 XPCQ01831 940 aaPredicted RBP16.96■□□□□ 0.31
PRKCSH-207ENST00000588269 KDM2AQ9Y2K7 1162 aa16.96■□□□□ 0.31
PRKCSH-207ENST00000588269 SOS2Q07890 1332 aaPredicted RBP16.96■□□□□ 0.3
PRKCSH-207ENST00000588269 NUTM2FA1L443 756 aa16.95■□□□□ 0.3
PRKCSH-207ENST00000588269 RBM6P78332 1123 aaKnown RBP16.95■□□□□ 0.3
PRKCSH-207ENST00000588269 CFAP70Q5T0N1 1121 aa16.95■□□□□ 0.3
PRKCSH-207ENST00000588269 TMEM132EQ6IEE7 984 aa16.95■□□□□ 0.3
PRKCSH-207ENST00000588269 SIRT1Q96EB6 747 aa16.95■□□□□ 0.3
PRKCSH-207ENST00000588269 ADGRB1O14514 1584 aa16.94■□□□□ 0.3
PRKCSH-207ENST00000588269 USP21Q9UK80 565 aa16.92■□□□□ 0.3
PRKCSH-207ENST00000588269 EIF3AQ14152 1382 aaKnown RBP16.91■□□□□ 0.3
PRKCSH-207ENST00000588269 KIAA1210Q9ULL0 1709 aa16.91■□□□□ 0.3
PRKCSH-207ENST00000588269 ESCO1Q5FWF5 840 aa16.91■□□□□ 0.3
PRKCSH-207ENST00000588269 WAPLQ7Z5K2 1190 aa16.91■□□□□ 0.3
PRKCSH-207ENST00000588269 POGKQ9P215 609 aa16.91■□□□□ 0.3
PRKCSH-207ENST00000588269 PLEKHH1Q9ULM0 1364 aa16.9■□□□□ 0.3
PRKCSH-207ENST00000588269 FOXO3O43524 673 aa16.88■□□□□ 0.29
PRKCSH-207ENST00000588269 PRAM1Q96QH2 718 aa16.88■□□□□ 0.29
PRKCSH-207ENST00000588269 ADGRB2O60241 1585 aa16.88■□□□□ 0.29
PRKCSH-207ENST00000588269 COL22A1Q8NFW1 1626 aaPredicted RBP16.88■□□□□ 0.29
PRKCSH-207ENST00000588269 PXDNQ92626 1479 aa16.87■□□□□ 0.29
PRKCSH-207ENST00000588269 KIF1AQ12756 1690 aa16.87■□□□□ 0.29
PRKCSH-207ENST00000588269 FMN2Q9NZ56 1722 aa16.87■□□□□ 0.29
PRKCSH-207ENST00000588269 NPHP3Q7Z494 1330 aa16.86■□□□□ 0.29
PRKCSH-207ENST00000588269 ATRNO75882 1429 aa16.86■□□□□ 0.29
PRKCSH-207ENST00000588269 PLEKHG5O94827 1062 aa16.85■□□□□ 0.29
PRKCSH-207ENST00000588269 FNBP4Q8N3X1 1017 aaPredicted RBP16.85■□□□□ 0.29
PRKCSH-207ENST00000588269 TRPC5Q9UL62 973 aaPredicted RBP16.85■□□□□ 0.29
PRKCSH-207ENST00000588269 TRAK1Q9UPV9 953 aa16.85■□□□□ 0.29
PRKCSH-207ENST00000588269 ANKARQ7Z5J8 1434 aa16.84■□□□□ 0.29
PRKCSH-207ENST00000588269 BCL9LQ86UU0 1499 aa16.84■□□□□ 0.29
PRKCSH-207ENST00000588269 MARF1Q9Y4F3 1742 aaKnown RBP16.84■□□□□ 0.29
PRKCSH-207ENST00000588269 NEUROD1Q13562 356 aa16.83■□□□□ 0.28
PRKCSH-207ENST00000588269 ARHGEF28Q8N1W1 1705 aaKnown RBP16.83■□□□□ 0.28
PRKCSH-207ENST00000588269 TONSLQ96HA7 1378 aa16.83■□□□□ 0.28
PRKCSH-207ENST00000588269 ATAD2Q6PL18 1390 aa16.82■□□□□ 0.28
PRKCSH-207ENST00000588269 SAFB2Q14151 953 aaKnown RBP eCLIP16.82■□□□□ 0.28
PRKCSH-207ENST00000588269 RGPD8O14715 1765 aaPredicted RBP16.82■□□□□ 0.28
PRKCSH-207ENST00000588269 L3MBTL2Q969R5 705 aa16.81■□□□□ 0.28
PRKCSH-207ENST00000588269 SIN3AQ96ST3 1273 aa16.79■□□□□ 0.28
PRKCSH-207ENST00000588269 TULP4Q9NRJ4 1543 aa16.79■□□□□ 0.28
PRKCSH-207ENST00000588269 ROCK2O75116 1388 aaKnown RBP16.77■□□□□ 0.28
PRKCSH-207ENST00000588269 MINK1Q8N4C8 1332 aaPredicted RBP16.77■□□□□ 0.28
PRKCSH-207ENST00000588269 CABLES1Q8TDN4 633 aa16.77■□□□□ 0.28
PRKCSH-207ENST00000588269 GLI3P10071 1580 aa16.77■□□□□ 0.27
PRKCSH-207ENST00000588269 GJD4Q96KN9 370 aaPredicted RBP16.76■□□□□ 0.27
PRKCSH-207ENST00000588269 TRPM1Q7Z4N2 1603 aa16.76■□□□□ 0.27
PRKCSH-207ENST00000588269 SPATA31A3Q5VYP0 1347 aa16.75■□□□□ 0.27
PRKCSH-207ENST00000588269 KRT28Q7Z3Y7 464 aa16.75■□□□□ 0.27
PRKCSH-207ENST00000588269 PHF8Q9UPP1 1060 aa16.75■□□□□ 0.27
PRKCSH-207ENST00000588269 ITSN1Q15811 1721 aa16.75■□□□□ 0.27
PRKCSH-207ENST00000588269 BRWD3Q6RI45 1802 aa16.75■□□□□ 0.27
PRKCSH-207ENST00000588269 RALGAPBQ86X10 1494 aa16.74■□□□□ 0.27
PRKCSH-207ENST00000588269 CENPJQ9HC77 1338 aaPredicted RBP16.74■□□□□ 0.27
PRKCSH-207ENST00000588269 WASLO00401 505 aaPredicted RBP16.74■□□□□ 0.27
PRKCSH-207ENST00000588269 PSME1Q06323 249 aa16.74■□□□□ 0.27
PRKCSH-207ENST00000588269 HIRIP3Q9BW71 556 aaPredicted RBP16.74■□□□□ 0.27
PRKCSH-207ENST00000588269 USP32Q8NFA0 1604 aa16.74■□□□□ 0.27
PRKCSH-207ENST00000588269 SLIT2O94813 1529 aa16.73■□□□□ 0.27
PRKCSH-207ENST00000588269 GPRASP1Q5JY77 1395 aa16.73■□□□□ 0.27
PRKCSH-207ENST00000588269 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.73■□□□□ 0.27
PRKCSH-207ENST00000588269 CLSPNQ9HAW4 1339 aa16.72■□□□□ 0.27
PRKCSH-207ENST00000588269 NBPF1Q3BBV0 1214 aa16.71■□□□□ 0.27
PRKCSH-207ENST00000588269 UNC5CLQ8IV45 518 aa16.71■□□□□ 0.27
PRKCSH-207ENST00000588269 ARHGEF10O15013 1369 aa16.71■□□□□ 0.27
PRKCSH-207ENST00000588269 TNS3Q68CZ2 1445 aa16.7■□□□□ 0.26
PRKCSH-207ENST00000588269 PLCH1Q4KWH8 1693 aa16.7■□□□□ 0.26
PRKCSH-207ENST00000588269 QRICH2Q9H0J4 1663 aa16.7■□□□□ 0.26
PRKCSH-207ENST00000588269 ATP7BP35670 1465 aa16.7■□□□□ 0.26
PRKCSH-207ENST00000588269 LMOD2Q6P5Q4 547 aa16.7■□□□□ 0.26
PRKCSH-207ENST00000588269 DEFB132Q7Z7B7 95 aa16.7■□□□□ 0.26
PRKCSH-207ENST00000588269 PMFBP1Q8TBY8 1022 aa16.7■□□□□ 0.26
PRKCSH-207ENST00000588269 ABCA3Q99758 1704 aa16.7■□□□□ 0.26
PRKCSH-207ENST00000588269 SBNO1A3KN83 1393 aa16.69■□□□□ 0.26
PRKCSH-207ENST00000588269 HAP1P54257 671 aaPredicted RBP16.69■□□□□ 0.26
PRKCSH-207ENST00000588269 PCGF6Q9BYE7 350 aa16.68■□□□□ 0.26
PRKCSH-207ENST00000588269 ZRANB1Q9UGI0 708 aa16.68■□□□□ 0.26
PRKCSH-207ENST00000588269 EP400Q96L91 3159 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms