RNA–Protein interactions for RNA: ENST00000587995.5

CACNA2D4-222, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, human

TSL 5 BASIC

Gene CACNA2D4, Length 3,883 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA2D4-222	ENST00000587995	PCDHB15	Q9Y5E8	787 aa		12.26	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	LRRIQ1	Q96JM4	1722 aa		12.26	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	NKTR	P30414	1462 aa	Known RBP	12.26	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	SCAF11	Q99590	1463 aa	Known RBP	12.26	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	SEC24B	O95487	1268 aa		12.26	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	MVP	Q14764	893 aa	Known RBP	12.25	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	RTF1	Q92541	710 aa	Known RBP	12.25	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	LTV1	Q96GA3	475 aa	Predicted RBP	12.25	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	RLBP1	P12271	317 aa		12.25	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	NECTIN2	Q92692	538 aa		12.25	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	ARHGEF12	Q9NZN5	1544 aa		12.25	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	SSH1	Q8WYL5	1049 aa		12.25	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	WDR63	Q8IWG1	891 aa		12.24	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	OSCAR	Q8IYS5	282 aa		12.24	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	BCORL1	Q5H9F3	1711 aa		12.24	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	TMPO	P42166	694 aa	Known RBP	12.24	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	CALD1	Q05682	793 aa	Known RBP	12.24	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	NOS1	P29475	1434 aa		12.24	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	COL17A1	Q9UMD9	1497 aa	Predicted RBP	12.24	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	ATF7IP	Q6VMQ6	1270 aa		12.23	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	TMEM57	Q8N5G2	664 aa		12.23	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	COG3	Q96JB2	828 aa		12.23	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	GBP4	Q96PP9	640 aa		12.23	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	CEP170	Q5SW79	1584 aa		12.23	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	12.23	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	FOXD4L3	Q6VB84	417 aa	Predicted RBP	12.23	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	CDK19	Q9BWU1	502 aa		12.22	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	KDM5C	P41229	1560 aa		12.22	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	CHMP5	Q9NZZ3	219 aa		12.22	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	NUP160	Q12769	1436 aa		12.22	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	PLCB2	Q00722	1185 aa		12.22	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	IDI1	Q13907	227 aa		12.22	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	WAPL	Q7Z5K2	1190 aa		12.21	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	MBD5	Q9P267	1494 aa		12.21	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	KIF16B	Q96L93	1317 aa		12.21	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	SHANK2	Q9UPX8	1470 aa		12.21	□□□□□ -0.45
CACNA2D4-222	ENST00000587995	PLCH2	O75038	1416 aa		12.21	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	OS9	Q13438	667 aa	Predicted RBP	12.2	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	TXNDC2	Q86VQ3	553 aa		12.2	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	TRIM6-TRIM34	B2RNG4	842 aa		12.2	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	TRIM27	P14373	513 aa		12.2	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	RRS1	Q15050	365 aa	Known RBP	12.2	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	FBXO31	Q5XUX0	539 aa	Predicted RBP	12.2	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	ADGRL1	O94910	1474 aa		12.2	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	PTMA	P06454	111 aa	Known RBP	12.19	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	DCTN1	Q14203	1278 aa		12.19	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	ABCC10	Q5T3U5	1492 aa		12.19	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	NGDN	Q8NEJ9	315 aa	Known RBP	12.19	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	TBC1D2	Q9BYX2	928 aa		12.19	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	ASXL1	Q8IXJ9	1541 aa		12.19	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	C14orf93	Q9H972	538 aa	Known RBP	12.18	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	KDM2B	Q8NHM5	1336 aa		12.18	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	FAM69C	Q0P6D2	419 aa		12.18	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	DDX49	Q9Y6V7	483 aa	Known RBP	12.18	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	FANCA	O15360	1455 aa		12.18	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	MAGI2	Q86UL8	1455 aa		12.18	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	AMPH	P49418	695 aa		12.17	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	GPRASP1	Q5JY77	1395 aa		12.17	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	TRAK2	O60296	914 aa		12.17	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	GNAI1	P63096	354 aa		12.17	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	LMOD3	Q0VAK6	560 aa		12.17	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	TWISTNB	Q3B726	338 aa	Predicted RBP	12.17	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	STK31	Q9BXU1	1019 aa		12.17	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	DUOX2	Q9NRD8	1548 aa		12.16	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	NUTM2G	Q5VZR2	741 aa		12.16	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	PLA2R1	Q13018	1463 aa		12.16	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	HDGF	P51858	240 aa	Known RBP	12.16	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	RILPL2	Q969X0	211 aa		12.16	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	CFAP65	Q6ZU64	1925 aa	Known RBP	12.16	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	EMILIN1	Q9Y6C2	1016 aa		12.15	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	HAP1	P54257	671 aa	Predicted RBP	12.15	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	AAMP	Q13685	434 aa		12.15	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	DDX11L8	A8MPP1	907 aa		12.15	□□□□□ -0.46
CACNA2D4-222	ENST00000587995	TAOK2	Q9UL54	1235 aa		12.14	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	ARID3A	Q99856	593 aa		12.14	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	API5	Q9BZZ5	524 aa	Known RBP	12.14	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	DNTTIP2	Q5QJE6	756 aa	Known RBP	12.14	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	SULT6B1	Q6IMI4	303 aa		12.14	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	CHD1L	Q86WJ1	897 aa		12.14	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	KCNJ4	P48050	445 aa		12.13	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	BLM	P54132	1417 aa	Predicted RBP	12.13	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	MCM4	P33991	863 aa		12.13	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	MIS18A	Q9NYP9	233 aa		12.13	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	NME9	Q86XW9	330 aa		12.13	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	ADGB	Q8N7X0	1667 aa		12.13	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	FYB1	O15117	783 aa		12.12	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	HMMR	O75330	724 aa		12.12	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	SLC52A1	Q9NWF4	448 aa		12.12	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	FAM83G	A6ND36	823 aa		12.12	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	MSN	P26038	577 aa	Known RBP	12.12	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	GLIPR1L2	Q4G1C9	344 aa		12.12	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	VSIG10	Q8N0Z9	540 aa		12.12	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	ZMYM4	Q5VZL5	1548 aa		12.12	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	PIK3C2G	O75747	1445 aa		12.11	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	NINL	Q9Y2I6	1382 aa		12.11	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	EIF2S2	P20042	333 aa	Known RBP	12.11	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	TBC1D32	Q96NH3	1257 aa		12.11	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	CD109	Q6YHK3	1445 aa		12.11	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	MCC	P23508	829 aa		12.11	□□□□□ -0.47
CACNA2D4-222	ENST00000587995	ZNF428	Q96B54	188 aa		12.11	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms