RNA–Protein interactions for RNA: ENST00000586993.5

DDX39A-205, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-205ENST00000586993 COL16A1Q07092 1604 aaPredicted RBP32.35■■■□□ 2.77
DDX39A-205ENST00000586993 AHDC1Q5TGY3 1603 aaPredicted RBP32.35■■■□□ 2.77
DDX39A-205ENST00000586993 C1orf167Q5SNV9 1468 aa32.32■■■□□ 2.76
DDX39A-205ENST00000586993 DLC1Q96QB1 1528 aa32.31■■■□□ 2.76
DDX39A-205ENST00000586993 SIRT1Q96EB6 747 aa32.3■■■□□ 2.76
DDX39A-205ENST00000586993 NEUROD1Q13562 356 aa32.28■■■□□ 2.76
DDX39A-205ENST00000586993 NHSL1Q5SYE7 1610 aa32.28■■■□□ 2.76
DDX39A-205ENST00000586993 KIAA1210Q9ULL0 1709 aa32.28■■■□□ 2.76
DDX39A-205ENST00000586993 L3MBTL2Q969R5 705 aa32.27■■■□□ 2.76
DDX39A-205ENST00000586993 PRAM1Q96QH2 718 aa32.25■■■□□ 2.75
DDX39A-205ENST00000586993 RGS17Q9UGC6 210 aaPredicted RBP32.25■■■□□ 2.75
DDX39A-205ENST00000586993 TRAK1Q9UPV9 953 aa32.24■■■□□ 2.75
DDX39A-205ENST00000586993 FMN2Q9NZ56 1722 aa32.23■■■□□ 2.75
DDX39A-205ENST00000586993 SAFB2Q14151 953 aaKnown RBP eCLIP32.22■■■□□ 2.75
DDX39A-205ENST00000586993 ORAI2Q96SN7 254 aa32.22■■■□□ 2.75
DDX39A-205ENST00000586993 ARHGEF28Q8N1W1 1705 aaKnown RBP32.22■■■□□ 2.75
DDX39A-205ENST00000586993 DDX17Q92841 729 aaKnown RBP32.21■■■□□ 2.75
DDX39A-205ENST00000586993 NBPF1Q3BBV0 1214 aa32.17■■■□□ 2.74
DDX39A-205ENST00000586993 JCADQ9P266 1359 aa32.17■■■□□ 2.74
DDX39A-205ENST00000586993 ADGRB2O60241 1585 aa32.16■■■□□ 2.74
DDX39A-205ENST00000586993 NUTM2FA1L443 756 aa32.16■■■□□ 2.74
DDX39A-205ENST00000586993 POGKQ9P215 609 aa32.16■■■□□ 2.74
DDX39A-205ENST00000586993 SHPRHQ149N8 1683 aa32.14■■■□□ 2.74
DDX39A-205ENST00000586993 RGPD8O14715 1765 aaPredicted RBP32.12■■■□□ 2.73
DDX39A-205ENST00000586993 TRPM1Q7Z4N2 1603 aa32.12■■■□□ 2.73
DDX39A-205ENST00000586993 PCGF6Q9BYE7 350 aa32.12■■■□□ 2.73
DDX39A-205ENST00000586993 ESCO1Q5FWF5 840 aa32.1■■■□□ 2.73
DDX39A-205ENST00000586993 USP32Q8NFA0 1604 aa32.08■■■□□ 2.73
DDX39A-205ENST00000586993 MINK1Q8N4C8 1332 aaPredicted RBP32.08■■■□□ 2.73
DDX39A-205ENST00000586993 HIRIP3Q9BW71 556 aaPredicted RBP32.08■■■□□ 2.73
DDX39A-205ENST00000586993 POTEAQ6S8J7 498 aa32.07■■■□□ 2.72
DDX39A-205ENST00000586993 LRP6O75581 1613 aa32.05■■■□□ 2.72
DDX39A-205ENST00000586993 SOS2Q07890 1332 aaPredicted RBP32.04■■■□□ 2.72
DDX39A-205ENST00000586993 KIF1AQ12756 1690 aa32.03■■■□□ 2.72
DDX39A-205ENST00000586993 PXDNQ92626 1479 aa32.03■■■□□ 2.72
DDX39A-205ENST00000586993 NBPF8Q3BBV2 869 aa32.02■■■□□ 2.72
DDX39A-205ENST00000586993 TONSLQ96HA7 1378 aa32.01■■■□□ 2.71
DDX39A-205ENST00000586993 PNPLA6Q8IY17 1366 aa32■■■□□ 2.71
DDX39A-205ENST00000586993 FOXO3O43524 673 aa32■■■□□ 2.71
DDX39A-205ENST00000586993 LRRC59Q96AG4 307 aaKnown RBP32■■■□□ 2.71
DDX39A-205ENST00000586993 ANKARQ7Z5J8 1434 aa32■■■□□ 2.71
DDX39A-205ENST00000586993 SPATA31A6Q5VVP1 1343 aa32■■■□□ 2.71
DDX39A-205ENST00000586993 TULP4Q9NRJ4 1543 aa31.98■■■□□ 2.71
DDX39A-205ENST00000586993 NPHP3Q7Z494 1330 aa31.98■■■□□ 2.71
DDX39A-205ENST00000586993 XPCQ01831 940 aaPredicted RBP31.97■■■□□ 2.71
DDX39A-205ENST00000586993 PRR36Q9H6K5 1346 aa31.97■■■□□ 2.71
DDX39A-205ENST00000586993 WASLO00401 505 aaPredicted RBP31.96■■■□□ 2.71
DDX39A-205ENST00000586993 ROCK2O75116 1388 aaKnown RBP31.94■■■□□ 2.7
DDX39A-205ENST00000586993 QRICH2Q9H0J4 1663 aa31.93■■■□□ 2.7
DDX39A-205ENST00000586993 PHF8Q9UPP1 1060 aa31.93■■■□□ 2.7
DDX39A-205ENST00000586993 MEX3CQ5U5Q3 659 aaKnown RBP31.92■■■□□ 2.7
DDX39A-205ENST00000586993 EIF3AQ14152 1382 aaKnown RBP31.91■■■□□ 2.7
DDX39A-205ENST00000586993 GPRASP1Q5JY77 1395 aa31.91■■■□□ 2.7
DDX39A-205ENST00000586993 NUTM2BA6NNL0 878 aaPredicted RBP31.9■■■□□ 2.7
DDX39A-205ENST00000586993 NUTM2EB1AL46 878 aaPredicted RBP31.9■■■□□ 2.7
DDX39A-205ENST00000586993 NUTM2AQ8IVF1 878 aaPredicted RBP31.9■■■□□ 2.7
DDX39A-205ENST00000586993 CENPJQ9HC77 1338 aaPredicted RBP31.9■■■□□ 2.7
DDX39A-205ENST00000586993 ATP7BP35670 1465 aa31.9■■■□□ 2.7
DDX39A-205ENST00000586993 COL22A1Q8NFW1 1626 aaPredicted RBP31.89■■■□□ 2.7
DDX39A-205ENST00000586993 RALGAPBQ86X10 1494 aa31.88■■■□□ 2.69
DDX39A-205ENST00000586993 PMFBP1Q8TBY8 1022 aa31.86■■■□□ 2.69
DDX39A-205ENST00000586993 CDK19Q9BWU1 502 aa31.85■■■□□ 2.69
DDX39A-205ENST00000586993 ITSN1Q15811 1721 aa31.85■■■□□ 2.69
DDX39A-205ENST00000586993 TOPAZ1Q8N9V7 1692 aa31.85■■■□□ 2.69
DDX39A-205ENST00000586993 KRT28Q7Z3Y7 464 aa31.83■■■□□ 2.69
DDX39A-205ENST00000586993 ZNF772Q68DY9 489 aaPredicted RBP31.82■■■□□ 2.68
DDX39A-205ENST00000586993 SPATA31A3Q5VYP0 1347 aa31.81■■■□□ 2.68
DDX39A-205ENST00000586993 NUDT16Q96DE0 195 aaKnown RBP31.81■■■□□ 2.68
DDX39A-205ENST00000586993 TRPM3Q9HCF6 1732 aaPredicted RBP31.8■■■□□ 2.68
DDX39A-205ENST00000586993 CLSPNQ9HAW4 1339 aa31.77■■■□□ 2.68
DDX39A-205ENST00000586993 TNS3Q68CZ2 1445 aa31.77■■■□□ 2.68
DDX39A-205ENST00000586993 CARD11Q9BXL7 1154 aa31.76■■■□□ 2.67
DDX39A-205ENST00000586993 PSME1Q06323 249 aa31.75■■■□□ 2.67
DDX39A-205ENST00000586993 SBNO1A3KN83 1393 aa31.75■■■□□ 2.67
DDX39A-205ENST00000586993 ADAMTS2O95450 1211 aa31.73■■■□□ 2.67
DDX39A-205ENST00000586993 CABP2Q9NPB3 220 aa31.73■■■□□ 2.67
DDX39A-205ENST00000586993 ALS2Q96Q42 1657 aa31.71■■■□□ 2.67
DDX39A-205ENST00000586993 SRPK2P78362 688 aaKnown RBP31.71■■■□□ 2.67
DDX39A-205ENST00000586993 NGDNQ8NEJ9 315 aaKnown RBP31.7■■■□□ 2.67
DDX39A-205ENST00000586993 CCDC61Q9Y6R9 512 aa31.7■■■□□ 2.67
DDX39A-205ENST00000586993 MARF1Q9Y4F3 1742 aaKnown RBP31.69■■■□□ 2.66
DDX39A-205ENST00000586993 C8orf37Q96NL8 207 aa31.69■■■□□ 2.66
DDX39A-205ENST00000586993 AFF2P51816 1311 aa31.69■■■□□ 2.66
DDX39A-205ENST00000586993 ABCA3Q99758 1704 aa31.69■■■□□ 2.66
DDX39A-205ENST00000586993 POLR3AO14802 1390 aaPredicted RBP31.68■■■□□ 2.66
DDX39A-205ENST00000586993 CCER1Q8TC90 406 aaPredicted RBP31.66■■■□□ 2.66
DDX39A-205ENST00000586993 PPIP5K1Q6PFW1 1433 aa31.66■■■□□ 2.66
DDX39A-205ENST00000586993 PLEKHG3A1L390 1219 aa31.65■■■□□ 2.66
DDX39A-205ENST00000586993 RXRBP28702 533 aa31.65■■■□□ 2.66
DDX39A-205ENST00000586993 EVC2Q86UK5 1308 aa31.65■■■□□ 2.66
DDX39A-205ENST00000586993 ARHGEF10O15013 1369 aa31.65■■■□□ 2.66
DDX39A-205ENST00000586993 LMOD2Q6P5Q4 547 aa31.64■■■□□ 2.66
DDX39A-205ENST00000586993 ACEP12821 1306 aa31.64■■■□□ 2.66
DDX39A-205ENST00000586993 SBNO2Q9Y2G9 1366 aa31.64■■■□□ 2.66
DDX39A-205ENST00000586993 CABLES1Q8TDN4 633 aa31.63■■■□□ 2.65
DDX39A-205ENST00000586993 TIMELESSQ9UNS1 1208 aa31.61■■■□□ 2.65
DDX39A-205ENST00000586993 PLEKHG5O94827 1062 aa31.6■■■□□ 2.65
DDX39A-205ENST00000586993 NGLY1Q96IV0 654 aa31.6■■■□□ 2.65
DDX39A-205ENST00000586993 CRYBG1Q9Y4K1 1723 aa31.59■■■□□ 2.65
DDX39A-205ENST00000586993 CABP1Q9NZU7 370 aa31.57■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms