RNA–Protein interactions for RNA: ENST00000584103.5

ACADVL-238, Transcript of acyl-CoA dehydrogenase very long chain, human

TSL 4

Gene ACADVL, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACADVL-238	ENST00000584103	PLEKHH1	Q9ULM0	1364 aa		31.84	■■■□□ 2.69
ACADVL-238	ENST00000584103	SHPRH	Q149N8	1683 aa		31.84	■■■□□ 2.69
ACADVL-238	ENST00000584103	ADGRB1	O14514	1584 aa		31.84	■■■□□ 2.69
ACADVL-238	ENST00000584103	SIRT1	Q96EB6	747 aa		31.83	■■■□□ 2.69
ACADVL-238	ENST00000584103	DLC1	Q96QB1	1528 aa		31.81	■■■□□ 2.68
ACADVL-238	ENST00000584103	SPATA31A6	Q5VVP1	1343 aa		31.76	■■■□□ 2.68
ACADVL-238	ENST00000584103	FMN2	Q9NZ56	1722 aa		31.76	■■■□□ 2.67
ACADVL-238	ENST00000584103	ORAI2	Q96SN7	254 aa		31.74	■■■□□ 2.67
ACADVL-238	ENST00000584103	DDX17	Q92841	729 aa	Known RBP	31.72	■■■□□ 2.67
ACADVL-238	ENST00000584103	PRAM1	Q96QH2	718 aa		31.72	■■■□□ 2.67
ACADVL-238	ENST00000584103	LRRC59	Q96AG4	307 aa	Known RBP	31.71	■■■□□ 2.67
ACADVL-238	ENST00000584103	KIAA1210	Q9ULL0	1709 aa		31.71	■■■□□ 2.67
ACADVL-238	ENST00000584103	TRIM26	Q12899	539 aa	Predicted RBP	31.7	■■■□□ 2.67
ACADVL-238	ENST00000584103	LRP6	O75581	1613 aa		31.69	■■■□□ 2.66
ACADVL-238	ENST00000584103	POGK	Q9P215	609 aa		31.69	■■■□□ 2.66
ACADVL-238	ENST00000584103	ESCO1	Q5FWF5	840 aa		31.68	■■■□□ 2.66
ACADVL-238	ENST00000584103	TRAK1	Q9UPV9	953 aa		31.68	■■■□□ 2.66
ACADVL-238	ENST00000584103	ADGRB2	O60241	1585 aa		31.68	■■■□□ 2.66
ACADVL-238	ENST00000584103	SAFB2	Q14151	953 aa	Known RBP eCLIP	31.66	■■■□□ 2.66
ACADVL-238	ENST00000584103	KIF1A	Q12756	1690 aa		31.65	■■■□□ 2.66
ACADVL-238	ENST00000584103	NUTM2F	A1L443	756 aa		31.65	■■■□□ 2.66
ACADVL-238	ENST00000584103	SOS2	Q07890	1332 aa	Predicted RBP	31.65	■■■□□ 2.66
ACADVL-238	ENST00000584103	ARHGEF28	Q8N1W1	1705 aa	Known RBP	31.64	■■■□□ 2.66
ACADVL-238	ENST00000584103	RGS17	Q9UGC6	210 aa	Predicted RBP	31.64	■■■□□ 2.66
ACADVL-238	ENST00000584103	NPHP3	Q7Z494	1330 aa		31.64	■■■□□ 2.66
ACADVL-238	ENST00000584103	PNPLA6	Q8IY17	1366 aa		31.64	■■■□□ 2.66
ACADVL-238	ENST00000584103	SOCS7	O14512	581 aa		31.63	■■■□□ 2.65
ACADVL-238	ENST00000584103	MEX3C	Q5U5Q3	659 aa	Known RBP	31.62	■■■□□ 2.65
ACADVL-238	ENST00000584103	RGPD8	O14715	1765 aa	Predicted RBP	31.59	■■■□□ 2.65
ACADVL-238	ENST00000584103	PXDN	Q92626	1479 aa		31.59	■■■□□ 2.65
ACADVL-238	ENST00000584103	SIN3A	Q96ST3	1273 aa		31.58	■■■□□ 2.65
ACADVL-238	ENST00000584103	NUTM2B	A6NNL0	878 aa	Predicted RBP	31.57	■■■□□ 2.64
ACADVL-238	ENST00000584103	NUTM2E	B1AL46	878 aa	Predicted RBP	31.57	■■■□□ 2.64
ACADVL-238	ENST00000584103	NUTM2A	Q8IVF1	878 aa	Predicted RBP	31.57	■■■□□ 2.64
ACADVL-238	ENST00000584103	ANKAR	Q7Z5J8	1434 aa		31.56	■■■□□ 2.64
ACADVL-238	ENST00000584103	L3MBTL2	Q969R5	705 aa		31.55	■■■□□ 2.64
ACADVL-238	ENST00000584103	EIF3A	Q14152	1382 aa	Known RBP	31.55	■■■□□ 2.64
ACADVL-238	ENST00000584103	FOXO3	O43524	673 aa		31.54	■■■□□ 2.64
ACADVL-238	ENST00000584103	NEUROD1	Q13562	356 aa		31.54	■■■□□ 2.64
ACADVL-238	ENST00000584103	USP32	Q8NFA0	1604 aa		31.53	■■■□□ 2.64
ACADVL-238	ENST00000584103	COL22A1	Q8NFW1	1626 aa	Predicted RBP	31.53	■■■□□ 2.64
ACADVL-238	ENST00000584103	MINK1	Q8N4C8	1332 aa	Predicted RBP	31.53	■■■□□ 2.64
ACADVL-238	ENST00000584103	HIRIP3	Q9BW71	556 aa	Predicted RBP	31.52	■■■□□ 2.64
ACADVL-238	ENST00000584103	TULP4	Q9NRJ4	1543 aa		31.5	■■■□□ 2.63
ACADVL-238	ENST00000584103	POTEA	Q6S8J7	498 aa		31.5	■■■□□ 2.63
ACADVL-238	ENST00000584103	PHF8	Q9UPP1	1060 aa		31.5	■■■□□ 2.63
ACADVL-238	ENST00000584103	XPC	Q01831	940 aa	Predicted RBP	31.49	■■■□□ 2.63
ACADVL-238	ENST00000584103	NBPF1	Q3BBV0	1214 aa		31.48	■■■□□ 2.63
ACADVL-238	ENST00000584103	WASL	O00401	505 aa	Predicted RBP	31.46	■■■□□ 2.63
ACADVL-238	ENST00000584103	ZNF772	Q68DY9	489 aa	Predicted RBP	31.46	■■■□□ 2.63
ACADVL-238	ENST00000584103	TRPM1	Q7Z4N2	1603 aa		31.46	■■■□□ 2.63
ACADVL-238	ENST00000584103	ITSN1	Q15811	1721 aa		31.42	■■■□□ 2.62
ACADVL-238	ENST00000584103	KRT28	Q7Z3Y7	464 aa		31.41	■■■□□ 2.62
ACADVL-238	ENST00000584103	AFF2	P51816	1311 aa		31.4	■■■□□ 2.62
ACADVL-238	ENST00000584103	PRR36	Q9H6K5	1346 aa		31.4	■■■□□ 2.62
ACADVL-238	ENST00000584103	PSME1	Q06323	249 aa		31.39	■■■□□ 2.62
ACADVL-238	ENST00000584103	C8orf37	Q96NL8	207 aa		31.39	■■■□□ 2.62
ACADVL-238	ENST00000584103	SPATA31A3	Q5VYP0	1347 aa		31.39	■■■□□ 2.62
ACADVL-238	ENST00000584103	TNS3	Q68CZ2	1445 aa		31.39	■■■□□ 2.62
ACADVL-238	ENST00000584103	ADAMTS2	O95450	1211 aa		31.38	■■■□□ 2.61
ACADVL-238	ENST00000584103	ATP7B	P35670	1465 aa		31.38	■■■□□ 2.61
ACADVL-238	ENST00000584103	PMFBP1	Q8TBY8	1022 aa		31.37	■■■□□ 2.61
ACADVL-238	ENST00000584103	SBNO1	A3KN83	1393 aa		31.36	■■■□□ 2.61
ACADVL-238	ENST00000584103	QRICH2	Q9H0J4	1663 aa		31.35	■■■□□ 2.61
ACADVL-238	ENST00000584103	TONSL	Q96HA7	1378 aa		31.35	■■■□□ 2.61
ACADVL-238	ENST00000584103	CENPJ	Q9HC77	1338 aa	Predicted RBP	31.35	■■■□□ 2.61
ACADVL-238	ENST00000584103	MARF1	Q9Y4F3	1742 aa	Known RBP	31.35	■■■□□ 2.61
ACADVL-238	ENST00000584103	ROCK2	O75116	1388 aa	Known RBP	31.34	■■■□□ 2.61
ACADVL-238	ENST00000584103	TRPM3	Q9HCF6	1732 aa	Predicted RBP	31.32	■■■□□ 2.6
ACADVL-238	ENST00000584103	TOPAZ1	Q8N9V7	1692 aa		31.32	■■■□□ 2.6
ACADVL-238	ENST00000584103	NGLY1	Q96IV0	654 aa		31.31	■■■□□ 2.6
ACADVL-238	ENST00000584103	CDK19	Q9BWU1	502 aa		31.31	■■■□□ 2.6
ACADVL-238	ENST00000584103	GPRASP1	Q5JY77	1395 aa		31.3	■■■□□ 2.6
ACADVL-238	ENST00000584103	NUDT16	Q96DE0	195 aa	Known RBP	31.3	■■■□□ 2.6
ACADVL-238	ENST00000584103	ARHGEF10	O15013	1369 aa		31.3	■■■□□ 2.6
ACADVL-238	ENST00000584103	NGDN	Q8NEJ9	315 aa	Known RBP	31.27	■■■□□ 2.6
ACADVL-238	ENST00000584103	ABCA3	Q99758	1704 aa		31.25	■■■□□ 2.59
ACADVL-238	ENST00000584103	NBPF8	Q3BBV2	869 aa		31.25	■■■□□ 2.59
ACADVL-238	ENST00000584103	ALS2	Q96Q42	1657 aa		31.25	■■■□□ 2.59
ACADVL-238	ENST00000584103	RXRB	P28702	533 aa		31.24	■■■□□ 2.59
ACADVL-238	ENST00000584103	LMOD2	Q6P5Q4	547 aa		31.24	■■■□□ 2.59
ACADVL-238	ENST00000584103	FNBP4	Q8N3X1	1017 aa	Predicted RBP	31.22	■■■□□ 2.59
ACADVL-238	ENST00000584103	CCDC61	Q9Y6R9	512 aa		31.22	■■■□□ 2.59
ACADVL-238	ENST00000584103	RALGAPB	Q86X10	1494 aa		31.21	■■■□□ 2.59
ACADVL-238	ENST00000584103	CDK12	Q9NYV4	1490 aa	Predicted RBP	31.21	■■■□□ 2.59
ACADVL-238	ENST00000584103	SRPK2	P78362	688 aa	Known RBP	31.21	■■■□□ 2.59
ACADVL-238	ENST00000584103	USP21	Q9UK80	565 aa		31.21	■■■□□ 2.59
ACADVL-238	ENST00000584103	HAP1	P54257	671 aa	Predicted RBP	31.2	■■■□□ 2.59
ACADVL-238	ENST00000584103	QTRT2	Q9H974	415 aa	Known RBP	31.2	■■■□□ 2.59
ACADVL-238	ENST00000584103	POLR3A	O14802	1390 aa	Predicted RBP	31.18	■■■□□ 2.58
ACADVL-238	ENST00000584103	RBM6	P78332	1123 aa	Known RBP	31.16	■■■□□ 2.58
ACADVL-238	ENST00000584103	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	31.15	■■■□□ 2.58
ACADVL-238	ENST00000584103	PLEKHG3	A1L390	1219 aa		31.15	■■■□□ 2.58
ACADVL-238	ENST00000584103	CABLES1	Q8TDN4	633 aa		31.15	■■■□□ 2.58
ACADVL-238	ENST00000584103	CABP2	Q9NPB3	220 aa		31.15	■■■□□ 2.58
ACADVL-238	ENST00000584103	TRPC5	Q9UL62	973 aa	Predicted RBP	31.15	■■■□□ 2.58
ACADVL-238	ENST00000584103	PPIP5K1	Q6PFW1	1433 aa		31.15	■■■□□ 2.58
ACADVL-238	ENST00000584103	PAK3	O75914	559 aa	Predicted RBP	31.14	■■■□□ 2.58
ACADVL-238	ENST00000584103	CARD11	Q9BXL7	1154 aa		31.14	■■■□□ 2.58
ACADVL-238	ENST00000584103	ACE	P12821	1306 aa		31.14	■■■□□ 2.58

Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms