RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 JCADQ9P266 1359 aa27.33■■□□□ 1.97
LIMS2-218ENST00000582671 FMN2Q9NZ56 1722 aa27.3■■□□□ 1.96
LIMS2-218ENST00000582671 DDX17Q92841 729 aaKnown RBP27.3■■□□□ 1.96
LIMS2-218ENST00000582671 SIRT1Q96EB6 747 aa27.3■■□□□ 1.96
LIMS2-218ENST00000582671 STAC3Q96MF2 364 aa27.29■■□□□ 1.96
LIMS2-218ENST00000582671 ORAI2Q96SN7 254 aa27.29■■□□□ 1.96
LIMS2-218ENST00000582671 RGPD8O14715 1765 aaPredicted RBP27.29■■□□□ 1.96
LIMS2-218ENST00000582671 DLC1Q96QB1 1528 aa27.28■■□□□ 1.96
LIMS2-218ENST00000582671 PHF23Q9BUL5 403 aaPredicted RBP27.27■■□□□ 1.96
LIMS2-218ENST00000582671 KIAA1210Q9ULL0 1709 aa27.24■■□□□ 1.95
LIMS2-218ENST00000582671 TRIM26Q12899 539 aaPredicted RBP27.24■■□□□ 1.95
LIMS2-218ENST00000582671 PRAM1Q96QH2 718 aa27.23■■□□□ 1.95
LIMS2-218ENST00000582671 RGS17Q9UGC6 210 aaPredicted RBP27.23■■□□□ 1.95
LIMS2-218ENST00000582671 LRP6O75581 1613 aa27.23■■□□□ 1.95
LIMS2-218ENST00000582671 ARHGEF28Q8N1W1 1705 aaKnown RBP27.22■■□□□ 1.95
LIMS2-218ENST00000582671 SIN3AQ96ST3 1273 aa27.22■■□□□ 1.95
LIMS2-218ENST00000582671 NUTM2FA1L443 756 aa27.21■■□□□ 1.95
LIMS2-218ENST00000582671 TRAK1Q9UPV9 953 aa27.21■■□□□ 1.95
LIMS2-218ENST00000582671 SAFB2Q14151 953 aaKnown RBP eCLIP27.2■■□□□ 1.94
LIMS2-218ENST00000582671 SPATA31A6Q5VVP1 1343 aa27.18■■□□□ 1.94
LIMS2-218ENST00000582671 ESCO1Q5FWF5 840 aa27.18■■□□□ 1.94
LIMS2-218ENST00000582671 ADGRB2O60241 1585 aa27.17■■□□□ 1.94
LIMS2-218ENST00000582671 LRRC59Q96AG4 307 aaKnown RBP27.16■■□□□ 1.94
LIMS2-218ENST00000582671 POGKQ9P215 609 aa27.16■■□□□ 1.94
LIMS2-218ENST00000582671 USP32Q8NFA0 1604 aa27.16■■□□□ 1.94
LIMS2-218ENST00000582671 SOS2Q07890 1332 aaPredicted RBP27.16■■□□□ 1.94
LIMS2-218ENST00000582671 KIF1AQ12756 1690 aa27.14■■□□□ 1.94
LIMS2-218ENST00000582671 L3MBTL2Q969R5 705 aa27.14■■□□□ 1.94
LIMS2-218ENST00000582671 PNPLA6Q8IY17 1366 aa27.13■■□□□ 1.93
LIMS2-218ENST00000582671 NEUROD1Q13562 356 aa27.12■■□□□ 1.93
LIMS2-218ENST00000582671 PXDNQ92626 1479 aa27.12■■□□□ 1.93
LIMS2-218ENST00000582671 NBPF1Q3BBV0 1214 aa27.1■■□□□ 1.93
LIMS2-218ENST00000582671 NUTM2BA6NNL0 878 aaPredicted RBP27.09■■□□□ 1.93
LIMS2-218ENST00000582671 NUTM2EB1AL46 878 aaPredicted RBP27.09■■□□□ 1.93
LIMS2-218ENST00000582671 SOCS7O14512 581 aa27.09■■□□□ 1.93
LIMS2-218ENST00000582671 FOXO3O43524 673 aa27.09■■□□□ 1.93
LIMS2-218ENST00000582671 NUTM2AQ8IVF1 878 aaPredicted RBP27.09■■□□□ 1.93
LIMS2-218ENST00000582671 HIRIP3Q9BW71 556 aaPredicted RBP27.08■■□□□ 1.93
LIMS2-218ENST00000582671 NPHP3Q7Z494 1330 aa27.08■■□□□ 1.93
LIMS2-218ENST00000582671 MINK1Q8N4C8 1332 aaPredicted RBP27.08■■□□□ 1.93
LIMS2-218ENST00000582671 COL22A1Q8NFW1 1626 aaPredicted RBP27.08■■□□□ 1.93
LIMS2-218ENST00000582671 XPCQ01831 940 aaPredicted RBP27.07■■□□□ 1.92
LIMS2-218ENST00000582671 TRPM1Q7Z4N2 1603 aa27.07■■□□□ 1.92
LIMS2-218ENST00000582671 POTEAQ6S8J7 498 aa27.06■■□□□ 1.92
LIMS2-218ENST00000582671 MEX3CQ5U5Q3 659 aaKnown RBP27.05■■□□□ 1.92
LIMS2-218ENST00000582671 ANKARQ7Z5J8 1434 aa27.03■■□□□ 1.92
LIMS2-218ENST00000582671 PHF8Q9UPP1 1060 aa27.01■■□□□ 1.91
LIMS2-218ENST00000582671 TULP4Q9NRJ4 1543 aa27■■□□□ 1.91
LIMS2-218ENST00000582671 PRR36Q9H6K5 1346 aa27■■□□□ 1.91
LIMS2-218ENST00000582671 WASLO00401 505 aaPredicted RBP27■■□□□ 1.91
LIMS2-218ENST00000582671 MARF1Q9Y4F3 1742 aaKnown RBP26.99■■□□□ 1.91
LIMS2-218ENST00000582671 ITSN1Q15811 1721 aa26.97■■□□□ 1.91
LIMS2-218ENST00000582671 QRICH2Q9H0J4 1663 aa26.97■■□□□ 1.91
LIMS2-218ENST00000582671 KRT28Q7Z3Y7 464 aa26.96■■□□□ 1.91
LIMS2-218ENST00000582671 PMFBP1Q8TBY8 1022 aa26.96■■□□□ 1.91
LIMS2-218ENST00000582671 EIF3AQ14152 1382 aaKnown RBP26.95■■□□□ 1.9
LIMS2-218ENST00000582671 TRPM3Q9HCF6 1732 aaPredicted RBP26.94■■□□□ 1.9
LIMS2-218ENST00000582671 SPATA31A3Q5VYP0 1347 aa26.93■■□□□ 1.9
LIMS2-218ENST00000582671 ADAMTS2O95450 1211 aa26.93■■□□□ 1.9
LIMS2-218ENST00000582671 NBPF8Q3BBV2 869 aa26.93■■□□□ 1.9
LIMS2-218ENST00000582671 ATP7BP35670 1465 aa26.93■■□□□ 1.9
LIMS2-218ENST00000582671 TOPAZ1Q8N9V7 1692 aa26.92■■□□□ 1.9
LIMS2-218ENST00000582671 AFF2P51816 1311 aa26.91■■□□□ 1.9
LIMS2-218ENST00000582671 ZNF772Q68DY9 489 aaPredicted RBP26.91■■□□□ 1.9
LIMS2-218ENST00000582671 C8orf37Q96NL8 207 aa26.91■■□□□ 1.9
LIMS2-218ENST00000582671 CDK19Q9BWU1 502 aa26.9■■□□□ 1.9
LIMS2-218ENST00000582671 ABCA3Q99758 1704 aa26.89■■□□□ 1.9
LIMS2-218ENST00000582671 CENPJQ9HC77 1338 aaPredicted RBP26.89■■□□□ 1.89
LIMS2-218ENST00000582671 PSME1Q06323 249 aa26.88■■□□□ 1.89
LIMS2-218ENST00000582671 NUDT16Q96DE0 195 aaKnown RBP26.88■■□□□ 1.89
LIMS2-218ENST00000582671 TNS3Q68CZ2 1445 aa26.88■■□□□ 1.89
LIMS2-218ENST00000582671 ALS2Q96Q42 1657 aa26.87■■□□□ 1.89
LIMS2-218ENST00000582671 SBNO1A3KN83 1393 aa26.86■■□□□ 1.89
LIMS2-218ENST00000582671 ROCK2O75116 1388 aaKnown RBP26.86■■□□□ 1.89
LIMS2-218ENST00000582671 TONSLQ96HA7 1378 aa26.86■■□□□ 1.89
LIMS2-218ENST00000582671 NGLY1Q96IV0 654 aa26.84■■□□□ 1.89
LIMS2-218ENST00000582671 GPRASP1Q5JY77 1395 aa26.81■■□□□ 1.88
LIMS2-218ENST00000582671 NGDNQ8NEJ9 315 aaKnown RBP26.8■■□□□ 1.88
LIMS2-218ENST00000582671 CRYBG1Q9Y4K1 1723 aa26.79■■□□□ 1.88
LIMS2-218ENST00000582671 CABLES1Q8TDN4 633 aa26.79■■□□□ 1.88
LIMS2-218ENST00000582671 LMOD2Q6P5Q4 547 aa26.78■■□□□ 1.88
LIMS2-218ENST00000582671 FNBP4Q8N3X1 1017 aaPredicted RBP26.78■■□□□ 1.88
LIMS2-218ENST00000582671 PCGF6Q9BYE7 350 aa26.78■■□□□ 1.88
LIMS2-218ENST00000582671 RALGAPBQ86X10 1494 aa26.78■■□□□ 1.88
LIMS2-218ENST00000582671 ARHGEF10O15013 1369 aa26.77■■□□□ 1.88
LIMS2-218ENST00000582671 PLEKHG5O94827 1062 aa26.77■■□□□ 1.88
LIMS2-218ENST00000582671 RXRBP28702 533 aa26.77■■□□□ 1.88
LIMS2-218ENST00000582671 CABP2Q9NPB3 220 aa26.77■■□□□ 1.88
LIMS2-218ENST00000582671 CCDC61Q9Y6R9 512 aa26.77■■□□□ 1.88
LIMS2-218ENST00000582671 SRPK2P78362 688 aaKnown RBP26.76■■□□□ 1.87
LIMS2-218ENST00000582671 QTRT2Q9H974 415 aaKnown RBP26.76■■□□□ 1.87
LIMS2-218ENST00000582671 USP21Q9UK80 565 aa26.76■■□□□ 1.87
LIMS2-218ENST00000582671 POLR3AO14802 1390 aaPredicted RBP26.74■■□□□ 1.87
LIMS2-218ENST00000582671 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.74■■□□□ 1.87
LIMS2-218ENST00000582671 BCL9LQ86UU0 1499 aa26.74■■□□□ 1.87
LIMS2-218ENST00000582671 PLCH1Q4KWH8 1693 aa26.73■■□□□ 1.87
LIMS2-218ENST00000582671 ACEP12821 1306 aa26.73■■□□□ 1.87
LIMS2-218ENST00000582671 PLEKHG3A1L390 1219 aa26.73■■□□□ 1.87
LIMS2-218ENST00000582671 PPIP5K1Q6PFW1 1433 aa26.72■■□□□ 1.87
LIMS2-218ENST00000582671 CARD11Q9BXL7 1154 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms