RNA–Protein interactions for RNA: ENST00000579339.5

LINC00271-205, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-205ENST00000579339 ORAI2Q96SN7 254 aa39.03■■■■□ 3.84
LINC00271-205ENST00000579339 ADGRB1O14514 1584 aa39.02■■■■□ 3.84
LINC00271-205ENST00000579339 STAC3Q96MF2 364 aa39.01■■■■□ 3.84
LINC00271-205ENST00000579339 NHSL1Q5SYE7 1610 aa39■■■■□ 3.83
LINC00271-205ENST00000579339 SIRT1Q96EB6 747 aa38.99■■■■□ 3.83
LINC00271-205ENST00000579339 NUTM2FA1L443 756 aa38.97■■■■□ 3.83
LINC00271-205ENST00000579339 TRIM26Q12899 539 aaPredicted RBP38.97■■■■□ 3.83
LINC00271-205ENST00000579339 SAFB2Q14151 953 aaKnown RBP eCLIP38.97■■■■□ 3.83
LINC00271-205ENST00000579339 PRAM1Q96QH2 718 aa38.97■■■■□ 3.83
LINC00271-205ENST00000579339 TRAK1Q9UPV9 953 aa38.94■■■■□ 3.82
LINC00271-205ENST00000579339 SIN3AQ96ST3 1273 aa38.92■■■■□ 3.82
LINC00271-205ENST00000579339 DLC1Q96QB1 1528 aa38.92■■■■□ 3.82
LINC00271-205ENST00000579339 ESCO1Q5FWF5 840 aa38.91■■■■□ 3.82
LINC00271-205ENST00000579339 POGKQ9P215 609 aa38.9■■■■□ 3.82
LINC00271-205ENST00000579339 SHPRHQ149N8 1683 aa38.9■■■■□ 3.82
LINC00271-205ENST00000579339 RGS17Q9UGC6 210 aaPredicted RBP38.89■■■■□ 3.82
LINC00271-205ENST00000579339 LRP6O75581 1613 aa38.88■■■■□ 3.81
LINC00271-205ENST00000579339 SPATA31A6Q5VVP1 1343 aa38.88■■■■□ 3.81
LINC00271-205ENST00000579339 LRRC59Q96AG4 307 aaKnown RBP38.86■■■■□ 3.81
LINC00271-205ENST00000579339 FMN2Q9NZ56 1722 aa38.86■■■■□ 3.81
LINC00271-205ENST00000579339 NEUROD1Q13562 356 aa38.84■■■■□ 3.81
LINC00271-205ENST00000579339 NUTM2BA6NNL0 878 aaPredicted RBP38.81■■■■□ 3.8
LINC00271-205ENST00000579339 NUTM2EB1AL46 878 aaPredicted RBP38.81■■■■□ 3.8
LINC00271-205ENST00000579339 NUTM2AQ8IVF1 878 aaPredicted RBP38.81■■■■□ 3.8
LINC00271-205ENST00000579339 SOS2Q07890 1332 aaPredicted RBP38.81■■■■□ 3.8
LINC00271-205ENST00000579339 L3MBTL2Q969R5 705 aa38.8■■■■□ 3.8
LINC00271-205ENST00000579339 PNPLA6Q8IY17 1366 aa38.79■■■■□ 3.8
LINC00271-205ENST00000579339 HIRIP3Q9BW71 556 aaPredicted RBP38.78■■■■□ 3.8
LINC00271-205ENST00000579339 FOXO3O43524 673 aa38.77■■■■□ 3.8
LINC00271-205ENST00000579339 MEX3CQ5U5Q3 659 aaKnown RBP38.77■■■■□ 3.8
LINC00271-205ENST00000579339 MINK1Q8N4C8 1332 aaPredicted RBP38.77■■■■□ 3.8
LINC00271-205ENST00000579339 XPCQ01831 940 aaPredicted RBP38.76■■■■□ 3.8
LINC00271-205ENST00000579339 NPHP3Q7Z494 1330 aa38.75■■■■□ 3.79
LINC00271-205ENST00000579339 SOCS7O14512 581 aa38.75■■■■□ 3.79
LINC00271-205ENST00000579339 NBPF1Q3BBV0 1214 aa38.75■■■■□ 3.79
LINC00271-205ENST00000579339 KIAA1210Q9ULL0 1709 aa38.73■■■■□ 3.79
LINC00271-205ENST00000579339 ADGRB2O60241 1585 aa38.72■■■■□ 3.79
LINC00271-205ENST00000579339 ARHGEF28Q8N1W1 1705 aaKnown RBP38.72■■■■□ 3.79
LINC00271-205ENST00000579339 POTEAQ6S8J7 498 aa38.71■■■■□ 3.79
LINC00271-205ENST00000579339 PXDNQ92626 1479 aa38.71■■■■□ 3.79
LINC00271-205ENST00000579339 RGPD8O14715 1765 aaPredicted RBP38.69■■■■□ 3.78
LINC00271-205ENST00000579339 KIF1AQ12756 1690 aa38.65■■■■□ 3.78
LINC00271-205ENST00000579339 PHF8Q9UPP1 1060 aa38.65■■■■□ 3.78
LINC00271-205ENST00000579339 USP32Q8NFA0 1604 aa38.63■■■■□ 3.78
LINC00271-205ENST00000579339 ANKARQ7Z5J8 1434 aa38.63■■■■□ 3.77
LINC00271-205ENST00000579339 WASLO00401 505 aaPredicted RBP38.61■■■■□ 3.77
LINC00271-205ENST00000579339 PRR36Q9H6K5 1346 aa38.6■■■■□ 3.77
LINC00271-205ENST00000579339 PMFBP1Q8TBY8 1022 aa38.58■■■■□ 3.77
LINC00271-205ENST00000579339 ADAMTS2O95450 1211 aa38.57■■■■□ 3.76
LINC00271-205ENST00000579339 KRT28Q7Z3Y7 464 aa38.57■■■■□ 3.76
LINC00271-205ENST00000579339 TULP4Q9NRJ4 1543 aa38.57■■■■□ 3.76
LINC00271-205ENST00000579339 EIF3AQ14152 1382 aaKnown RBP38.56■■■■□ 3.76
LINC00271-205ENST00000579339 C8orf37Q96NL8 207 aa38.54■■■■□ 3.76
LINC00271-205ENST00000579339 COL22A1Q8NFW1 1626 aaPredicted RBP38.53■■■■□ 3.76
LINC00271-205ENST00000579339 AFF2P51816 1311 aa38.52■■■■□ 3.76
LINC00271-205ENST00000579339 ZNF772Q68DY9 489 aaPredicted RBP38.51■■■■□ 3.76
LINC00271-205ENST00000579339 SPATA31A3Q5VYP0 1347 aa38.51■■■■□ 3.76
LINC00271-205ENST00000579339 TRPM1Q7Z4N2 1603 aa38.51■■■■□ 3.76
LINC00271-205ENST00000579339 PSME1Q06323 249 aa38.48■■■■□ 3.75
LINC00271-205ENST00000579339 NBPF8Q3BBV2 869 aa38.48■■■■□ 3.75
LINC00271-205ENST00000579339 CENPJQ9HC77 1338 aaPredicted RBP38.47■■■■□ 3.75
LINC00271-205ENST00000579339 CDK19Q9BWU1 502 aa38.47■■■■□ 3.75
LINC00271-205ENST00000579339 TONSLQ96HA7 1378 aa38.46■■■■□ 3.75
LINC00271-205ENST00000579339 ROCK2O75116 1388 aaKnown RBP38.45■■■■□ 3.75
LINC00271-205ENST00000579339 ATP7BP35670 1465 aa38.45■■■■□ 3.75
LINC00271-205ENST00000579339 NUDT16Q96DE0 195 aaKnown RBP38.44■■■■□ 3.74
LINC00271-205ENST00000579339 TNS3Q68CZ2 1445 aa38.44■■■■□ 3.74
LINC00271-205ENST00000579339 NGLY1Q96IV0 654 aa38.43■■■■□ 3.74
LINC00271-205ENST00000579339 SBNO1A3KN83 1393 aa38.41■■■■□ 3.74
LINC00271-205ENST00000579339 PLEKHG5O94827 1062 aa38.4■■■■□ 3.74
LINC00271-205ENST00000579339 LMOD2Q6P5Q4 547 aa38.4■■■■□ 3.74
LINC00271-205ENST00000579339 NGDNQ8NEJ9 315 aaKnown RBP38.38■■■■□ 3.73
LINC00271-205ENST00000579339 QRICH2Q9H0J4 1663 aa38.37■■■■□ 3.73
LINC00271-205ENST00000579339 GPRASP1Q5JY77 1395 aa38.36■■■■□ 3.73
LINC00271-205ENST00000579339 PCGF6Q9BYE7 350 aa38.35■■■■□ 3.73
LINC00271-205ENST00000579339 ITSN1Q15811 1721 aa38.34■■■■□ 3.73
LINC00271-205ENST00000579339 CABLES1Q8TDN4 633 aa38.33■■■■□ 3.73
LINC00271-205ENST00000579339 SRPK2P78362 688 aaKnown RBP38.32■■■■□ 3.72
LINC00271-205ENST00000579339 TRPM3Q9HCF6 1732 aaPredicted RBP38.32■■■■□ 3.72
LINC00271-205ENST00000579339 ARHGEF10O15013 1369 aa38.31■■■■□ 3.72
LINC00271-205ENST00000579339 RXRBP28702 533 aa38.31■■■■□ 3.72
LINC00271-205ENST00000579339 QTRT2Q9H974 415 aaKnown RBP38.3■■■■□ 3.72
LINC00271-205ENST00000579339 CABP2Q9NPB3 220 aa38.3■■■■□ 3.72
LINC00271-205ENST00000579339 USP21Q9UK80 565 aa38.29■■■■□ 3.72
LINC00271-205ENST00000579339 CCDC61Q9Y6R9 512 aa38.29■■■■□ 3.72
LINC00271-205ENST00000579339 TOPAZ1Q8N9V7 1692 aa38.29■■■■□ 3.72
LINC00271-205ENST00000579339 FNBP4Q8N3X1 1017 aaPredicted RBP38.28■■■■□ 3.72
LINC00271-205ENST00000579339 HAP1P54257 671 aaPredicted RBP38.27■■■■□ 3.72
LINC00271-205ENST00000579339 MARF1Q9Y4F3 1742 aaKnown RBP38.26■■■■□ 3.71
LINC00271-205ENST00000579339 PAK3O75914 559 aaPredicted RBP38.25■■■■□ 3.71
LINC00271-205ENST00000579339 RALGAPBQ86X10 1494 aa38.25■■■■□ 3.71
LINC00271-205ENST00000579339 CARD11Q9BXL7 1154 aa38.25■■■■□ 3.71
LINC00271-205ENST00000579339 ACEP12821 1306 aa38.24■■■■□ 3.71
LINC00271-205ENST00000579339 ALS2Q96Q42 1657 aa38.23■■■■□ 3.71
LINC00271-205ENST00000579339 POLR3AO14802 1390 aaPredicted RBP38.21■■■■□ 3.71
LINC00271-205ENST00000579339 PLEKHG3A1L390 1219 aa38.21■■■■□ 3.71
LINC00271-205ENST00000579339 ABCA3Q99758 1704 aa38.21■■■■□ 3.71
LINC00271-205ENST00000579339 PPIP5K1Q6PFW1 1433 aa38.21■■■■□ 3.71
LINC00271-205ENST00000579339 RBM6P78332 1123 aaKnown RBP38.19■■■■□ 3.7
LINC00271-205ENST00000579339 EVC2Q86UK5 1308 aa38.18■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms