RNA–Protein interactions for RNA: ENST00000578061.5

LIMD2-202, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LIMD2, Length 756 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-202ENST00000578061 NUTM2FA1L443 756 aa30.09■■■□□ 2.41
LIMD2-202ENST00000578061 SAFB2Q14151 953 aaKnown RBP eCLIP30.08■■■□□ 2.41
LIMD2-202ENST00000578061 CDC42BPGQ6DT37 1551 aa30.07■■■□□ 2.4
LIMD2-202ENST00000578061 PRAM1Q96QH2 718 aa30.07■■■□□ 2.4
LIMD2-202ENST00000578061 SIRT1Q96EB6 747 aa30.06■■■□□ 2.4
LIMD2-202ENST00000578061 NHSL1Q5SYE7 1610 aa30.06■■■□□ 2.4
LIMD2-202ENST00000578061 ADGRB1O14514 1584 aa30.06■■■□□ 2.4
LIMD2-202ENST00000578061 STAC3Q96MF2 364 aa30.05■■■□□ 2.4
LIMD2-202ENST00000578061 TRAK1Q9UPV9 953 aa30.04■■■□□ 2.4
LIMD2-202ENST00000578061 ESCO1Q5FWF5 840 aa30.03■■■□□ 2.4
LIMD2-202ENST00000578061 RGS17Q9UGC6 210 aaPredicted RBP30.03■■■□□ 2.4
LIMD2-202ENST00000578061 SIN3AQ96ST3 1273 aa30.02■■■□□ 2.4
LIMD2-202ENST00000578061 POGKQ9P215 609 aa30.02■■■□□ 2.4
LIMD2-202ENST00000578061 TRIM26Q12899 539 aaPredicted RBP30.01■■■□□ 2.39
LIMD2-202ENST00000578061 LRRC59Q96AG4 307 aaKnown RBP30■■■□□ 2.39
LIMD2-202ENST00000578061 SPATA31A6Q5VVP1 1343 aa29.99■■■□□ 2.39
LIMD2-202ENST00000578061 LRP6O75581 1613 aa29.99■■■□□ 2.39
LIMD2-202ENST00000578061 SHPRHQ149N8 1683 aa29.98■■■□□ 2.39
LIMD2-202ENST00000578061 DLC1Q96QB1 1528 aa29.98■■■□□ 2.39
LIMD2-202ENST00000578061 NUTM2BA6NNL0 878 aaPredicted RBP29.98■■■□□ 2.39
LIMD2-202ENST00000578061 NUTM2EB1AL46 878 aaPredicted RBP29.98■■■□□ 2.39
LIMD2-202ENST00000578061 NUTM2AQ8IVF1 878 aaPredicted RBP29.98■■■□□ 2.39
LIMD2-202ENST00000578061 NEUROD1Q13562 356 aa29.96■■■□□ 2.39
LIMD2-202ENST00000578061 SOCS7O14512 581 aa29.95■■■□□ 2.39
LIMD2-202ENST00000578061 MEX3CQ5U5Q3 659 aaKnown RBP29.95■■■□□ 2.39
LIMD2-202ENST00000578061 SOS2Q07890 1332 aaPredicted RBP29.94■■■□□ 2.38
LIMD2-202ENST00000578061 FMN2Q9NZ56 1722 aa29.93■■■□□ 2.38
LIMD2-202ENST00000578061 XPCQ01831 940 aaPredicted RBP29.93■■■□□ 2.38
LIMD2-202ENST00000578061 HIRIP3Q9BW71 556 aaPredicted RBP29.93■■■□□ 2.38
LIMD2-202ENST00000578061 PNPLA6Q8IY17 1366 aa29.92■■■□□ 2.38
LIMD2-202ENST00000578061 FOXO3O43524 673 aa29.92■■■□□ 2.38
LIMD2-202ENST00000578061 L3MBTL2Q969R5 705 aa29.92■■■□□ 2.38
LIMD2-202ENST00000578061 MINK1Q8N4C8 1332 aaPredicted RBP29.91■■■□□ 2.38
LIMD2-202ENST00000578061 POTEAQ6S8J7 498 aa29.9■■■□□ 2.38
LIMD2-202ENST00000578061 NPHP3Q7Z494 1330 aa29.89■■■□□ 2.38
LIMD2-202ENST00000578061 NBPF1Q3BBV0 1214 aa29.88■■■□□ 2.37
LIMD2-202ENST00000578061 PXDNQ92626 1479 aa29.84■■■□□ 2.37
LIMD2-202ENST00000578061 PHF8Q9UPP1 1060 aa29.82■■■□□ 2.36
LIMD2-202ENST00000578061 RGPD8O14715 1765 aaPredicted RBP29.82■■■□□ 2.36
LIMD2-202ENST00000578061 KIAA1210Q9ULL0 1709 aa29.82■■■□□ 2.36
LIMD2-202ENST00000578061 ADGRB2O60241 1585 aa29.81■■■□□ 2.36
LIMD2-202ENST00000578061 ARHGEF28Q8N1W1 1705 aaKnown RBP29.81■■■□□ 2.36
LIMD2-202ENST00000578061 ADAMTS2O95450 1211 aa29.79■■■□□ 2.36
LIMD2-202ENST00000578061 WASLO00401 505 aaPredicted RBP29.78■■■□□ 2.36
LIMD2-202ENST00000578061 PMFBP1Q8TBY8 1022 aa29.78■■■□□ 2.36
LIMD2-202ENST00000578061 KIF1AQ12756 1690 aa29.78■■■□□ 2.36
LIMD2-202ENST00000578061 KRT28Q7Z3Y7 464 aa29.77■■■□□ 2.36
LIMD2-202ENST00000578061 C8orf37Q96NL8 207 aa29.77■■■□□ 2.36
LIMD2-202ENST00000578061 USP32Q8NFA0 1604 aa29.77■■■□□ 2.36
LIMD2-202ENST00000578061 PRR36Q9H6K5 1346 aa29.76■■■□□ 2.36
LIMD2-202ENST00000578061 ANKARQ7Z5J8 1434 aa29.76■■■□□ 2.35
LIMD2-202ENST00000578061 AFF2P51816 1311 aa29.73■■■□□ 2.35
LIMD2-202ENST00000578061 ZNF772Q68DY9 489 aaPredicted RBP29.73■■■□□ 2.35
LIMD2-202ENST00000578061 TULP4Q9NRJ4 1543 aa29.71■■■□□ 2.35
LIMD2-202ENST00000578061 PSME1Q06323 249 aa29.71■■■□□ 2.35
LIMD2-202ENST00000578061 EIF3AQ14152 1382 aaKnown RBP29.71■■■□□ 2.35
LIMD2-202ENST00000578061 SPATA31A3Q5VYP0 1347 aa29.71■■■□□ 2.35
LIMD2-202ENST00000578061 COL22A1Q8NFW1 1626 aaPredicted RBP29.7■■■□□ 2.34
LIMD2-202ENST00000578061 PLEKHG5O94827 1062 aa29.68■■■□□ 2.34
LIMD2-202ENST00000578061 NGLY1Q96IV0 654 aa29.68■■■□□ 2.34
LIMD2-202ENST00000578061 CDK19Q9BWU1 502 aa29.68■■■□□ 2.34
LIMD2-202ENST00000578061 NBPF8Q3BBV2 869 aa29.66■■■□□ 2.34
LIMD2-202ENST00000578061 NUDT16Q96DE0 195 aaKnown RBP29.66■■■□□ 2.34
LIMD2-202ENST00000578061 CENPJQ9HC77 1338 aaPredicted RBP29.66■■■□□ 2.34
LIMD2-202ENST00000578061 TRPM1Q7Z4N2 1603 aa29.65■■■□□ 2.34
LIMD2-202ENST00000578061 LMOD2Q6P5Q4 547 aa29.65■■■□□ 2.34
LIMD2-202ENST00000578061 ROCK2O75116 1388 aaKnown RBP29.64■■■□□ 2.33
LIMD2-202ENST00000578061 TONSLQ96HA7 1378 aa29.64■■■□□ 2.33
LIMD2-202ENST00000578061 TNS3Q68CZ2 1445 aa29.63■■■□□ 2.33
LIMD2-202ENST00000578061 ATP7BP35670 1465 aa29.62■■■□□ 2.33
LIMD2-202ENST00000578061 NGDNQ8NEJ9 315 aaKnown RBP29.62■■■□□ 2.33
LIMD2-202ENST00000578061 SBNO1A3KN83 1393 aa29.61■■■□□ 2.33
LIMD2-202ENST00000578061 CABLES1Q8TDN4 633 aa29.6■■■□□ 2.33
LIMD2-202ENST00000578061 RXRBP28702 533 aa29.59■■■□□ 2.33
LIMD2-202ENST00000578061 GPRASP1Q5JY77 1395 aa29.59■■■□□ 2.33
LIMD2-202ENST00000578061 QTRT2Q9H974 415 aaKnown RBP29.58■■■□□ 2.33
LIMD2-202ENST00000578061 SRPK2P78362 688 aaKnown RBP29.57■■■□□ 2.32
LIMD2-202ENST00000578061 HAP1P54257 671 aaPredicted RBP29.56■■■□□ 2.32
LIMD2-202ENST00000578061 USP21Q9UK80 565 aa29.56■■■□□ 2.32
LIMD2-202ENST00000578061 QRICH2Q9H0J4 1663 aa29.56■■■□□ 2.32
LIMD2-202ENST00000578061 PCGF6Q9BYE7 350 aa29.55■■■□□ 2.32
LIMD2-202ENST00000578061 CABP2Q9NPB3 220 aa29.55■■■□□ 2.32
LIMD2-202ENST00000578061 ARHGEF10O15013 1369 aa29.53■■■□□ 2.32
LIMD2-202ENST00000578061 PAK3O75914 559 aaPredicted RBP29.53■■■□□ 2.32
LIMD2-202ENST00000578061 FNBP4Q8N3X1 1017 aaPredicted RBP29.53■■■□□ 2.32
LIMD2-202ENST00000578061 CCDC61Q9Y6R9 512 aa29.53■■■□□ 2.32
LIMD2-202ENST00000578061 ITSN1Q15811 1721 aa29.53■■■□□ 2.32
LIMD2-202ENST00000578061 TRPM3Q9HCF6 1732 aaPredicted RBP29.53■■■□□ 2.32
LIMD2-202ENST00000578061 ACEP12821 1306 aa29.49■■■□□ 2.31
LIMD2-202ENST00000578061 MARF1Q9Y4F3 1742 aaKnown RBP29.49■■■□□ 2.31
LIMD2-202ENST00000578061 CARD11Q9BXL7 1154 aa29.49■■■□□ 2.31
LIMD2-202ENST00000578061 TOPAZ1Q8N9V7 1692 aa29.49■■■□□ 2.31
LIMD2-202ENST00000578061 RBM6P78332 1123 aaKnown RBP29.48■■■□□ 2.31
LIMD2-202ENST00000578061 PLEKHG3A1L390 1219 aa29.47■■■□□ 2.31
LIMD2-202ENST00000578061 TRPC5Q9UL62 973 aaPredicted RBP29.46■■■□□ 2.31
LIMD2-202ENST00000578061 PPIP5K1Q6PFW1 1433 aa29.45■■■□□ 2.31
LIMD2-202ENST00000578061 ALS2Q96Q42 1657 aa29.45■■■□□ 2.31
LIMD2-202ENST00000578061 BCL9LQ86UU0 1499 aa29.45■■■□□ 2.31
LIMD2-202ENST00000578061 POLR3AO14802 1390 aaPredicted RBP29.45■■■□□ 2.31
LIMD2-202ENST00000578061 RALGAPBQ86X10 1494 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms