RNA–Protein interactions for RNA: ENST00000578061.5

LIMD2-202, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LIMD2, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-202ENST00000578061 NUTM2FA1L443 756 aa30.09■■■□□ 2.41
LIMD2-202ENST00000578061 SAFB2Q14151 953 aaKnown RBP eCLIP30.08■■■□□ 2.41
LIMD2-202ENST00000578061 CDC42BPGQ6DT37 1551 aa30.07■■■□□ 2.4
LIMD2-202ENST00000578061 PRAM1Q96QH2 718 aa30.07■■■□□ 2.4
LIMD2-202ENST00000578061 SIRT1Q96EB6 747 aa30.06■■■□□ 2.4
LIMD2-202ENST00000578061 NHSL1Q5SYE7 1610 aa30.06■■■□□ 2.4
LIMD2-202ENST00000578061 ADGRB1O14514 1584 aa30.06■■■□□ 2.4
LIMD2-202ENST00000578061 STAC3Q96MF2 364 aa30.05■■■□□ 2.4
LIMD2-202ENST00000578061 TRAK1Q9UPV9 953 aa30.04■■■□□ 2.4
LIMD2-202ENST00000578061 ESCO1Q5FWF5 840 aa30.03■■■□□ 2.4
LIMD2-202ENST00000578061 RGS17Q9UGC6 210 aaPredicted RBP30.03■■■□□ 2.4
LIMD2-202ENST00000578061 SIN3AQ96ST3 1273 aa30.02■■■□□ 2.4
LIMD2-202ENST00000578061 POGKQ9P215 609 aa30.02■■■□□ 2.4
LIMD2-202ENST00000578061 TRIM26Q12899 539 aaPredicted RBP30.01■■■□□ 2.39
LIMD2-202ENST00000578061 LRRC59Q96AG4 307 aaKnown RBP30■■■□□ 2.39
LIMD2-202ENST00000578061 SPATA31A6Q5VVP1 1343 aa29.99■■■□□ 2.39
LIMD2-202ENST00000578061 LRP6O75581 1613 aa29.99■■■□□ 2.39
LIMD2-202ENST00000578061 SHPRHQ149N8 1683 aa29.98■■■□□ 2.39
LIMD2-202ENST00000578061 DLC1Q96QB1 1528 aa29.98■■■□□ 2.39
LIMD2-202ENST00000578061 NUTM2BA6NNL0 878 aaPredicted RBP29.98■■■□□ 2.39
LIMD2-202ENST00000578061 NUTM2EB1AL46 878 aaPredicted RBP29.98■■■□□ 2.39
LIMD2-202ENST00000578061 NUTM2AQ8IVF1 878 aaPredicted RBP29.98■■■□□ 2.39
LIMD2-202ENST00000578061 NEUROD1Q13562 356 aa29.96■■■□□ 2.39
LIMD2-202ENST00000578061 SOCS7O14512 581 aa29.95■■■□□ 2.39
LIMD2-202ENST00000578061 MEX3CQ5U5Q3 659 aaKnown RBP29.95■■■□□ 2.39
LIMD2-202ENST00000578061 SOS2Q07890 1332 aaPredicted RBP29.94■■■□□ 2.38
LIMD2-202ENST00000578061 FMN2Q9NZ56 1722 aa29.93■■■□□ 2.38
LIMD2-202ENST00000578061 XPCQ01831 940 aaPredicted RBP29.93■■■□□ 2.38
LIMD2-202ENST00000578061 HIRIP3Q9BW71 556 aaPredicted RBP29.93■■■□□ 2.38
LIMD2-202ENST00000578061 PNPLA6Q8IY17 1366 aa29.92■■■□□ 2.38
LIMD2-202ENST00000578061 FOXO3O43524 673 aa29.92■■■□□ 2.38
LIMD2-202ENST00000578061 L3MBTL2Q969R5 705 aa29.92■■■□□ 2.38
LIMD2-202ENST00000578061 MINK1Q8N4C8 1332 aaPredicted RBP29.91■■■□□ 2.38
LIMD2-202ENST00000578061 POTEAQ6S8J7 498 aa29.9■■■□□ 2.38
LIMD2-202ENST00000578061 NPHP3Q7Z494 1330 aa29.89■■■□□ 2.38
LIMD2-202ENST00000578061 NBPF1Q3BBV0 1214 aa29.88■■■□□ 2.37
LIMD2-202ENST00000578061 PXDNQ92626 1479 aa29.84■■■□□ 2.37
LIMD2-202ENST00000578061 PHF8Q9UPP1 1060 aa29.82■■■□□ 2.36
LIMD2-202ENST00000578061 RGPD8O14715 1765 aaPredicted RBP29.82■■■□□ 2.36
LIMD2-202ENST00000578061 KIAA1210Q9ULL0 1709 aa29.82■■■□□ 2.36
LIMD2-202ENST00000578061 ADGRB2O60241 1585 aa29.81■■■□□ 2.36
LIMD2-202ENST00000578061 ARHGEF28Q8N1W1 1705 aaKnown RBP29.81■■■□□ 2.36
LIMD2-202ENST00000578061 ADAMTS2O95450 1211 aa29.79■■■□□ 2.36
LIMD2-202ENST00000578061 WASLO00401 505 aaPredicted RBP29.78■■■□□ 2.36
LIMD2-202ENST00000578061 PMFBP1Q8TBY8 1022 aa29.78■■■□□ 2.36
LIMD2-202ENST00000578061 KIF1AQ12756 1690 aa29.78■■■□□ 2.36
LIMD2-202ENST00000578061 KRT28Q7Z3Y7 464 aa29.77■■■□□ 2.36
LIMD2-202ENST00000578061 C8orf37Q96NL8 207 aa29.77■■■□□ 2.36
LIMD2-202ENST00000578061 USP32Q8NFA0 1604 aa29.77■■■□□ 2.36
LIMD2-202ENST00000578061 PRR36Q9H6K5 1346 aa29.76■■■□□ 2.36
LIMD2-202ENST00000578061 ANKARQ7Z5J8 1434 aa29.76■■■□□ 2.35
LIMD2-202ENST00000578061 AFF2P51816 1311 aa29.73■■■□□ 2.35
LIMD2-202ENST00000578061 ZNF772Q68DY9 489 aaPredicted RBP29.73■■■□□ 2.35
LIMD2-202ENST00000578061 TULP4Q9NRJ4 1543 aa29.71■■■□□ 2.35
LIMD2-202ENST00000578061 PSME1Q06323 249 aa29.71■■■□□ 2.35
LIMD2-202ENST00000578061 EIF3AQ14152 1382 aaKnown RBP29.71■■■□□ 2.35
LIMD2-202ENST00000578061 SPATA31A3Q5VYP0 1347 aa29.71■■■□□ 2.35
LIMD2-202ENST00000578061 COL22A1Q8NFW1 1626 aaPredicted RBP29.7■■■□□ 2.34
LIMD2-202ENST00000578061 PLEKHG5O94827 1062 aa29.68■■■□□ 2.34
LIMD2-202ENST00000578061 NGLY1Q96IV0 654 aa29.68■■■□□ 2.34
LIMD2-202ENST00000578061 CDK19Q9BWU1 502 aa29.68■■■□□ 2.34
LIMD2-202ENST00000578061 NBPF8Q3BBV2 869 aa29.66■■■□□ 2.34
LIMD2-202ENST00000578061 NUDT16Q96DE0 195 aaKnown RBP29.66■■■□□ 2.34
LIMD2-202ENST00000578061 CENPJQ9HC77 1338 aaPredicted RBP29.66■■■□□ 2.34
LIMD2-202ENST00000578061 TRPM1Q7Z4N2 1603 aa29.65■■■□□ 2.34
LIMD2-202ENST00000578061 LMOD2Q6P5Q4 547 aa29.65■■■□□ 2.34
LIMD2-202ENST00000578061 ROCK2O75116 1388 aaKnown RBP29.64■■■□□ 2.33
LIMD2-202ENST00000578061 TONSLQ96HA7 1378 aa29.64■■■□□ 2.33
LIMD2-202ENST00000578061 TNS3Q68CZ2 1445 aa29.63■■■□□ 2.33
LIMD2-202ENST00000578061 ATP7BP35670 1465 aa29.62■■■□□ 2.33
LIMD2-202ENST00000578061 NGDNQ8NEJ9 315 aaKnown RBP29.62■■■□□ 2.33
LIMD2-202ENST00000578061 SBNO1A3KN83 1393 aa29.61■■■□□ 2.33
LIMD2-202ENST00000578061 CABLES1Q8TDN4 633 aa29.6■■■□□ 2.33
LIMD2-202ENST00000578061 RXRBP28702 533 aa29.59■■■□□ 2.33
LIMD2-202ENST00000578061 GPRASP1Q5JY77 1395 aa29.59■■■□□ 2.33
LIMD2-202ENST00000578061 QTRT2Q9H974 415 aaKnown RBP29.58■■■□□ 2.33
LIMD2-202ENST00000578061 SRPK2P78362 688 aaKnown RBP29.57■■■□□ 2.32
LIMD2-202ENST00000578061 HAP1P54257 671 aaPredicted RBP29.56■■■□□ 2.32
LIMD2-202ENST00000578061 USP21Q9UK80 565 aa29.56■■■□□ 2.32
LIMD2-202ENST00000578061 QRICH2Q9H0J4 1663 aa29.56■■■□□ 2.32
LIMD2-202ENST00000578061 PCGF6Q9BYE7 350 aa29.55■■■□□ 2.32
LIMD2-202ENST00000578061 CABP2Q9NPB3 220 aa29.55■■■□□ 2.32
LIMD2-202ENST00000578061 ARHGEF10O15013 1369 aa29.53■■■□□ 2.32
LIMD2-202ENST00000578061 PAK3O75914 559 aaPredicted RBP29.53■■■□□ 2.32
LIMD2-202ENST00000578061 FNBP4Q8N3X1 1017 aaPredicted RBP29.53■■■□□ 2.32
LIMD2-202ENST00000578061 CCDC61Q9Y6R9 512 aa29.53■■■□□ 2.32
LIMD2-202ENST00000578061 ITSN1Q15811 1721 aa29.53■■■□□ 2.32
LIMD2-202ENST00000578061 TRPM3Q9HCF6 1732 aaPredicted RBP29.53■■■□□ 2.32
LIMD2-202ENST00000578061 ACEP12821 1306 aa29.49■■■□□ 2.31
LIMD2-202ENST00000578061 MARF1Q9Y4F3 1742 aaKnown RBP29.49■■■□□ 2.31
LIMD2-202ENST00000578061 CARD11Q9BXL7 1154 aa29.49■■■□□ 2.31
LIMD2-202ENST00000578061 TOPAZ1Q8N9V7 1692 aa29.49■■■□□ 2.31
LIMD2-202ENST00000578061 RBM6P78332 1123 aaKnown RBP29.48■■■□□ 2.31
LIMD2-202ENST00000578061 PLEKHG3A1L390 1219 aa29.47■■■□□ 2.31
LIMD2-202ENST00000578061 TRPC5Q9UL62 973 aaPredicted RBP29.46■■■□□ 2.31
LIMD2-202ENST00000578061 PPIP5K1Q6PFW1 1433 aa29.45■■■□□ 2.31
LIMD2-202ENST00000578061 ALS2Q96Q42 1657 aa29.45■■■□□ 2.31
LIMD2-202ENST00000578061 BCL9LQ86UU0 1499 aa29.45■■■□□ 2.31
LIMD2-202ENST00000578061 POLR3AO14802 1390 aaPredicted RBP29.45■■■□□ 2.31
LIMD2-202ENST00000578061 RALGAPBQ86X10 1494 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms