RNA–Protein interactions for RNA: ENST00000575225.5

NOMO3-213, Transcript of NODAL modulator 3, humanhuman

TSL 1 (best)

Gene NOMO3, Length 3,765 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOMO3-213ENST00000575225 DISP1Q96F81 1524 aa20.23■□□□□ 0.83
NOMO3-213ENST00000575225 FAM43AQ8N2R8 423 aa20.22■□□□□ 0.83
NOMO3-213ENST00000575225 EVC2Q86UK5 1308 aa20.22■□□□□ 0.83
NOMO3-213ENST00000575225 IFT140Q96RY7 1462 aa20.21■□□□□ 0.83
NOMO3-213ENST00000575225 DIAPH1O60610 1272 aaKnown RBP20.21■□□□□ 0.83
NOMO3-213ENST00000575225 MCTP1Q6DN14 999 aa20.2■□□□□ 0.82
NOMO3-213ENST00000575225 DDX11L8A8MPP1 907 aa20.2■□□□□ 0.82
NOMO3-213ENST00000575225 TRIM27P14373 513 aa20.2■□□□□ 0.82
NOMO3-213ENST00000575225 CALD1Q05682 793 aaKnown RBP20.2■□□□□ 0.82
NOMO3-213ENST00000575225 CASC1Q6TDU7 716 aa20.2■□□□□ 0.82
NOMO3-213ENST00000575225 TERF2IPQ9NYB0 399 aa20.2■□□□□ 0.82
NOMO3-213ENST00000575225 PRKAR2BP31323 418 aa20.19■□□□□ 0.82
NOMO3-213ENST00000575225 ATF7IPQ6VMQ6 1270 aa20.19■□□□□ 0.82
NOMO3-213ENST00000575225 LRRIQ1Q96JM4 1722 aa20.19■□□□□ 0.82
NOMO3-213ENST00000575225 FAM135AQ9P2D6 1515 aa20.18■□□□□ 0.82
NOMO3-213ENST00000575225 XRCC6P12956 609 aaKnown RBP eCLIP20.17■□□□□ 0.82
NOMO3-213ENST00000575225 RNF214Q8ND24 703 aa20.17■□□□□ 0.82
NOMO3-213ENST00000575225 RBM42Q9BTD8 480 aaKnown RBP20.17■□□□□ 0.82
NOMO3-213ENST00000575225 A2MP01023 1474 aa20.17■□□□□ 0.82
NOMO3-213ENST00000575225 TBC1D32Q96NH3 1257 aa20.17■□□□□ 0.82
NOMO3-213ENST00000575225 KDM5CP41229 1560 aa20.17■□□□□ 0.82
NOMO3-213ENST00000575225 TRIM6-TRIM34B2RNG4 842 aa20.17■□□□□ 0.82
NOMO3-213ENST00000575225 RRAGDQ9NQL2 400 aaPredicted RBP20.16■□□□□ 0.82
NOMO3-213ENST00000575225 ZNF428Q96B54 188 aa20.15■□□□□ 0.82
NOMO3-213ENST00000575225 DCTN1Q14203 1278 aa20.15■□□□□ 0.82
NOMO3-213ENST00000575225 KIF21AQ7Z4S6 1674 aa20.15■□□□□ 0.82
NOMO3-213ENST00000575225 UHRF1BP1Q6BDS2 1440 aa20.14■□□□□ 0.82
NOMO3-213ENST00000575225 ABCA5Q8WWZ7 1642 aa20.14■□□□□ 0.82
NOMO3-213ENST00000575225 KIAA0556O60303 1618 aa20.14■□□□□ 0.81
NOMO3-213ENST00000575225 TMPOP42166 694 aaKnown RBP20.14■□□□□ 0.81
NOMO3-213ENST00000575225 CAVIN1Q6NZI2 390 aaKnown RBP20.14■□□□□ 0.81
NOMO3-213ENST00000575225 GRPEL1Q9HAV7 217 aa20.14■□□□□ 0.81
NOMO3-213ENST00000575225 RILPL2Q969X0 211 aa20.13■□□□□ 0.81
NOMO3-213ENST00000575225 RBM10P98175 930 aaKnown RBP20.12■□□□□ 0.81
NOMO3-213ENST00000575225 PRAM1Q96QH2 718 aa20.12■□□□□ 0.81
NOMO3-213ENST00000575225 FAM13BQ9NYF5 915 aa20.12■□□□□ 0.81
NOMO3-213ENST00000575225 MRE11P49959 708 aa20.12■□□□□ 0.81
NOMO3-213ENST00000575225 SYCP2Q9BX26 1530 aa20.11■□□□□ 0.81
NOMO3-213ENST00000575225 CABP1Q9NZU7 370 aa20.11■□□□□ 0.81
NOMO3-213ENST00000575225 GPRASP1Q5JY77 1395 aa20.11■□□□□ 0.81
NOMO3-213ENST00000575225 COL17A1Q9UMD9 1497 aaPredicted RBP20.11■□□□□ 0.81
NOMO3-213ENST00000575225 WDR63Q8IWG1 891 aa20.11■□□□□ 0.81
NOMO3-213ENST00000575225 MAGI2Q86UL8 1455 aa20.1■□□□□ 0.81
NOMO3-213ENST00000575225 VGFO15240 615 aaPredicted RBP20.1■□□□□ 0.81
NOMO3-213ENST00000575225 CHD1LQ86WJ1 897 aa20.1■□□□□ 0.81
NOMO3-213ENST00000575225 LTV1Q96GA3 475 aaPredicted RBP20.1■□□□□ 0.81
NOMO3-213ENST00000575225 BCL11BQ9C0K0 894 aaPredicted RBP20.09■□□□□ 0.81
NOMO3-213ENST00000575225 RAPGEF3O95398 923 aa20.08■□□□□ 0.81
NOMO3-213ENST00000575225 NASPP49321 788 aaPredicted RBP20.08■□□□□ 0.81
NOMO3-213ENST00000575225 TNPO1Q92973 898 aaKnown RBP20.08■□□□□ 0.81
NOMO3-213ENST00000575225 ADAMTS12P58397 1594 aa20.08■□□□□ 0.81
NOMO3-213ENST00000575225 SSFA2P28290 1259 aa20.07■□□□□ 0.8
NOMO3-213ENST00000575225 NGEFQ8N5V2 710 aa20.07■□□□□ 0.8
NOMO3-213ENST00000575225 KIF16BQ96L93 1317 aa20.07■□□□□ 0.8
NOMO3-213ENST00000575225 RRS1Q15050 365 aaKnown RBP20.07■□□□□ 0.8
NOMO3-213ENST00000575225 ESPNB1AK53 854 aa20.06■□□□□ 0.8
NOMO3-213ENST00000575225 SMARCA5O60264 1052 aaPredicted RBP20.06■□□□□ 0.8
NOMO3-213ENST00000575225 PRPF40AO75400 957 aaKnown RBP20.06■□□□□ 0.8
NOMO3-213ENST00000575225 BLMP54132 1417 aaPredicted RBP20.06■□□□□ 0.8
NOMO3-213ENST00000575225 OS9Q13438 667 aaPredicted RBP20.06■□□□□ 0.8
NOMO3-213ENST00000575225 MIS18AQ9NYP9 233 aa20.05■□□□□ 0.8
NOMO3-213ENST00000575225 CHMP3Q9Y3E7 222 aa20.05■□□□□ 0.8
NOMO3-213ENST00000575225 SCAF11Q99590 1463 aaKnown RBP20.05■□□□□ 0.8
NOMO3-213ENST00000575225 CHMP4BQ9H444 224 aaKnown RBP20.05■□□□□ 0.8
NOMO3-213ENST00000575225 ZMYM4Q5VZL5 1548 aa20.04■□□□□ 0.8
NOMO3-213ENST00000575225 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.04■□□□□ 0.8
NOMO3-213ENST00000575225 R3HCC1Q9Y3T6 440 aaKnown RBP20.04■□□□□ 0.8
NOMO3-213ENST00000575225 LMOD2Q6P5Q4 547 aa20.03■□□□□ 0.8
NOMO3-213ENST00000575225 MBD5Q9P267 1494 aa20.03■□□□□ 0.8
NOMO3-213ENST00000575225 FAM83GA6ND36 823 aa20.03■□□□□ 0.8
NOMO3-213ENST00000575225 TWISTNBQ3B726 338 aaPredicted RBP20.03■□□□□ 0.8
NOMO3-213ENST00000575225 RTF1Q92541 710 aaKnown RBP20.03■□□□□ 0.8
NOMO3-213ENST00000575225 ASXL1Q8IXJ9 1541 aa20.02■□□□□ 0.8
NOMO3-213ENST00000575225 ARHGEF12Q9NZN5 1544 aa20.02■□□□□ 0.8
NOMO3-213ENST00000575225 ST18O60284 1047 aa20.02■□□□□ 0.79
NOMO3-213ENST00000575225 TSHZ3Q63HK5 1081 aa20.02■□□□□ 0.79
NOMO3-213ENST00000575225 ANO2Q9NQ90 1003 aa20.01■□□□□ 0.79
NOMO3-213ENST00000575225 TRAPPC8Q9Y2L5 1435 aa20.01■□□□□ 0.79
NOMO3-213ENST00000575225 KCNJ4P48050 445 aa20.01■□□□□ 0.79
NOMO3-213ENST00000575225 WAPLQ7Z5K2 1190 aa20.01■□□□□ 0.79
NOMO3-213ENST00000575225 NOS1P29475 1434 aa20■□□□□ 0.79
NOMO3-213ENST00000575225 ZNF521Q96K83 1311 aa19.99■□□□□ 0.79
NOMO3-213ENST00000575225 CFAP65Q6ZU64 1925 aaKnown RBP19.99■□□□□ 0.79
NOMO3-213ENST00000575225 K7ELQ4 463 aaPredicted RBP19.99■□□□□ 0.79
NOMO3-213ENST00000575225 C16orf71Q8IYS4 520 aaPredicted RBP19.99■□□□□ 0.79
NOMO3-213ENST00000575225 EMILIN1Q9Y6C2 1016 aa19.99■□□□□ 0.79
NOMO3-213ENST00000575225 USP19O94966 1318 aa19.98■□□□□ 0.79
NOMO3-213ENST00000575225 ITSN2Q9NZM3 1697 aa19.98■□□□□ 0.79
NOMO3-213ENST00000575225 ADGRL2O95490 1459 aa19.98■□□□□ 0.79
NOMO3-213ENST00000575225 NEK4P51957 841 aa19.98■□□□□ 0.79
NOMO3-213ENST00000575225 TSPYL6Q8N831 410 aa19.98■□□□□ 0.79
NOMO3-213ENST00000575225 CDC45O75419 566 aa19.97■□□□□ 0.79
NOMO3-213ENST00000575225 DTNBO60941 627 aa19.97■□□□□ 0.79
NOMO3-213ENST00000575225 TBC1D9Q6ZT07 1266 aa19.97■□□□□ 0.79
NOMO3-213ENST00000575225 NUTM2GQ5VZR2 741 aa19.97■□□□□ 0.79
NOMO3-213ENST00000575225 CDK19Q9BWU1 502 aa19.97■□□□□ 0.79
NOMO3-213ENST00000575225 ATAD2Q6PL18 1390 aa19.96■□□□□ 0.79
NOMO3-213ENST00000575225 SKOR2Q2VWA4 1001 aaPredicted RBP19.96■□□□□ 0.79
NOMO3-213ENST00000575225 TARBP1Q13395 1621 aaKnown RBP19.96■□□□□ 0.79
NOMO3-213ENST00000575225 KRT24Q2M2I5 525 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms