RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 DCCP43146 1447 aa12.47□□□□□ -0.41
TRAPPC1-203ENST00000571739 MST1RQ04912 1400 aa12.47□□□□□ -0.41
TRAPPC1-203ENST00000571739 BRINP3Q76B58 766 aa12.47□□□□□ -0.41
TRAPPC1-203ENST00000571739 ORAI2Q96SN7 254 aa12.47□□□□□ -0.41
TRAPPC1-203ENST00000571739 KNDC1Q76NI1 1749 aa12.47□□□□□ -0.41
TRAPPC1-203ENST00000571739 DLC1Q96QB1 1528 aa12.47□□□□□ -0.41
TRAPPC1-203ENST00000571739 NALCNQ8IZF0 1738 aa12.46□□□□□ -0.41
TRAPPC1-203ENST00000571739 NUTM2FA1L443 756 aa12.46□□□□□ -0.41
TRAPPC1-203ENST00000571739 KIAA1210Q9ULL0 1709 aa12.45□□□□□ -0.42
TRAPPC1-203ENST00000571739 C1orf167Q5SNV9 1468 aa12.45□□□□□ -0.42
TRAPPC1-203ENST00000571739 MINK1Q8N4C8 1332 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC1-203ENST00000571739 DDX17Q92841 729 aaKnown RBP12.44□□□□□ -0.42
TRAPPC1-203ENST00000571739 HIRIP3Q9BW71 556 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC1-203ENST00000571739 TIMELESSQ9UNS1 1208 aa12.44□□□□□ -0.42
TRAPPC1-203ENST00000571739 ROBO1Q9Y6N7 1651 aa12.44□□□□□ -0.42
TRAPPC1-203ENST00000571739 WASLO00401 505 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC1-203ENST00000571739 ESCO1Q5FWF5 840 aa12.42□□□□□ -0.42
TRAPPC1-203ENST00000571739 ROCK2O75116 1388 aaKnown RBP12.42□□□□□ -0.42
TRAPPC1-203ENST00000571739 TRPM1Q7Z4N2 1603 aa12.41□□□□□ -0.42
TRAPPC1-203ENST00000571739 GPRASP1Q5JY77 1395 aa12.41□□□□□ -0.42
TRAPPC1-203ENST00000571739 CARD11Q9BXL7 1154 aa12.4□□□□□ -0.42
TRAPPC1-203ENST00000571739 ARHGEF28Q8N1W1 1705 aaKnown RBP12.4□□□□□ -0.43
TRAPPC1-203ENST00000571739 PRR36Q9H6K5 1346 aa12.39□□□□□ -0.43
TRAPPC1-203ENST00000571739 CDC42BPGQ6DT37 1551 aa12.39□□□□□ -0.43
TRAPPC1-203ENST00000571739 FOXO3O43524 673 aa12.39□□□□□ -0.43
TRAPPC1-203ENST00000571739 CDK19Q9BWU1 502 aa12.39□□□□□ -0.43
TRAPPC1-203ENST00000571739 CENPJQ9HC77 1338 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC1-203ENST00000571739 SOS2Q07890 1332 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC1-203ENST00000571739 RALGAPBQ86X10 1494 aa12.36□□□□□ -0.43
TRAPPC1-203ENST00000571739 PMFBP1Q8TBY8 1022 aa12.36□□□□□ -0.43
TRAPPC1-203ENST00000571739 NUDT16Q96DE0 195 aaKnown RBP12.36□□□□□ -0.43
TRAPPC1-203ENST00000571739 PHF8Q9UPP1 1060 aa12.36□□□□□ -0.43
TRAPPC1-203ENST00000571739 FMN2Q9NZ56 1722 aa12.36□□□□□ -0.43
TRAPPC1-203ENST00000571739 XPCQ01831 940 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC1-203ENST00000571739 LRRC59Q96AG4 307 aaKnown RBP12.35□□□□□ -0.43
TRAPPC1-203ENST00000571739 AHDC1Q5TGY3 1603 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC1-203ENST00000571739 RGPD8O14715 1765 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC1-203ENST00000571739 ADGRB2O60241 1585 aa12.35□□□□□ -0.43
TRAPPC1-203ENST00000571739 PHLPP1O60346 1717 aa12.34□□□□□ -0.43
TRAPPC1-203ENST00000571739 CABP2Q9NPB3 220 aa12.34□□□□□ -0.43
TRAPPC1-203ENST00000571739 COL16A1Q07092 1604 aaPredicted RBP12.33□□□□□ -0.43
TRAPPC1-203ENST00000571739 USP32Q8NFA0 1604 aa12.33□□□□□ -0.43
TRAPPC1-203ENST00000571739 ST20-MTHFSA0A0A6YYL1 179 aa12.33□□□□□ -0.44
TRAPPC1-203ENST00000571739 KRT28Q7Z3Y7 464 aa12.33□□□□□ -0.44
TRAPPC1-203ENST00000571739 CCDC61Q9Y6R9 512 aa12.33□□□□□ -0.44
TRAPPC1-203ENST00000571739 ANKARQ7Z5J8 1434 aa12.33□□□□□ -0.44
TRAPPC1-203ENST00000571739 NPHP3Q7Z494 1330 aa12.33□□□□□ -0.44
TRAPPC1-203ENST00000571739 JCADQ9P266 1359 aa12.32□□□□□ -0.44
TRAPPC1-203ENST00000571739 TESK2Q96S53 571 aa12.32□□□□□ -0.44
TRAPPC1-203ENST00000571739 NHSL1Q5SYE7 1610 aa12.32□□□□□ -0.44
TRAPPC1-203ENST00000571739 PLEKHG3A1L390 1219 aa12.31□□□□□ -0.44
TRAPPC1-203ENST00000571739 SRPK2P78362 688 aaKnown RBP12.31□□□□□ -0.44
TRAPPC1-203ENST00000571739 PSME1Q06323 249 aa12.31□□□□□ -0.44
TRAPPC1-203ENST00000571739 TULP4Q9NRJ4 1543 aa12.31□□□□□ -0.44
TRAPPC1-203ENST00000571739 EVC2Q86UK5 1308 aa12.3□□□□□ -0.44
TRAPPC1-203ENST00000571739 EIF3AQ14152 1382 aaKnown RBP12.3□□□□□ -0.44
TRAPPC1-203ENST00000571739 ATP7BP35670 1465 aa12.29□□□□□ -0.44
TRAPPC1-203ENST00000571739 PXDNQ92626 1479 aa12.29□□□□□ -0.44
TRAPPC1-203ENST00000571739 CABP1Q9NZU7 370 aa12.29□□□□□ -0.44
TRAPPC1-203ENST00000571739 SPATA31A3Q5VYP0 1347 aa12.29□□□□□ -0.44
TRAPPC1-203ENST00000571739 PNPLA6Q8IY17 1366 aa12.29□□□□□ -0.44
TRAPPC1-203ENST00000571739 SBNO2Q9Y2G9 1366 aa12.29□□□□□ -0.44
TRAPPC1-203ENST00000571739 QRICH2Q9H0J4 1663 aa12.29□□□□□ -0.44
TRAPPC1-203ENST00000571739 NGDNQ8NEJ9 315 aaKnown RBP12.28□□□□□ -0.44
TRAPPC1-203ENST00000571739 ACEP12821 1306 aa12.28□□□□□ -0.44
TRAPPC1-203ENST00000571739 SPATA31A6Q5VVP1 1343 aa12.28□□□□□ -0.44
TRAPPC1-203ENST00000571739 NUTM2BA6NNL0 878 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC1-203ENST00000571739 NUTM2EB1AL46 878 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC1-203ENST00000571739 NUTM2AQ8IVF1 878 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC1-203ENST00000571739 RGS17Q9UGC6 210 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC1-203ENST00000571739 USP47Q96K76 1375 aa12.26□□□□□ -0.45
TRAPPC1-203ENST00000571739 SBNO1A3KN83 1393 aa12.25□□□□□ -0.45
TRAPPC1-203ENST00000571739 POLR3AO14802 1390 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC1-203ENST00000571739 DISP3Q9P2K9 1392 aa12.25□□□□□ -0.45
TRAPPC1-203ENST00000571739 KIF1AQ12756 1690 aa12.25□□□□□ -0.45
TRAPPC1-203ENST00000571739 LRP6O75581 1613 aa12.24□□□□□ -0.45
TRAPPC1-203ENST00000571739 MED1Q15648 1581 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC1-203ENST00000571739 PPIP5K1Q6PFW1 1433 aa12.24□□□□□ -0.45
TRAPPC1-203ENST00000571739 PUS7Q96PZ0 661 aaKnown RBP12.24□□□□□ -0.45
TRAPPC1-203ENST00000571739 SLC12A5Q9H2X9 1139 aa12.24□□□□□ -0.45
TRAPPC1-203ENST00000571739 SHPRHQ149N8 1683 aa12.23□□□□□ -0.45
TRAPPC1-203ENST00000571739 CABLES1Q8TDN4 633 aa12.23□□□□□ -0.45
TRAPPC1-203ENST00000571739 SLC24A1O60721 1099 aa12.22□□□□□ -0.45
TRAPPC1-203ENST00000571739 PAK3O75914 559 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC1-203ENST00000571739 HSPA5P11021 654 aaKnown RBP12.22□□□□□ -0.45
TRAPPC1-203ENST00000571739 LMOD2Q6P5Q4 547 aa12.22□□□□□ -0.45
TRAPPC1-203ENST00000571739 TOPAZ1Q8N9V7 1692 aa12.22□□□□□ -0.45
TRAPPC1-203ENST00000571739 ATAD2Q6PL18 1390 aa12.21□□□□□ -0.45
TRAPPC1-203ENST00000571739 PLEKHG5O94827 1062 aa12.21□□□□□ -0.45
TRAPPC1-203ENST00000571739 ADAMTS2O95450 1211 aa12.21□□□□□ -0.45
TRAPPC1-203ENST00000571739 EIF4G2P78344 907 aaKnown RBP eCLIP12.21□□□□□ -0.45
TRAPPC1-203ENST00000571739 TMF1P82094 1093 aa12.21□□□□□ -0.45
TRAPPC1-203ENST00000571739 ZNF692Q9BU19 519 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC1-203ENST00000571739 TNS3Q68CZ2 1445 aa12.2□□□□□ -0.46
TRAPPC1-203ENST00000571739 ILDR2Q71H61 639 aa12.2□□□□□ -0.46
TRAPPC1-203ENST00000571739 TMC1Q8TDI8 760 aa12.2□□□□□ -0.46
TRAPPC1-203ENST00000571739 TRPM3Q9HCF6 1732 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC1-203ENST00000571739 CPSF1Q10570 1443 aaKnown RBP12.2□□□□□ -0.46
TRAPPC1-203ENST00000571739 MEX3CQ5U5Q3 659 aaKnown RBP12.19□□□□□ -0.46
TRAPPC1-203ENST00000571739 NUTM2GQ5VZR2 741 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms