RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 CFAP70Q5T0N1 1121 aa25.2■■□□□ 1.62
RPA1-203ENST00000571058 LRRC59Q96AG4 307 aaKnown RBP25.19■■□□□ 1.62
RPA1-203ENST00000571058 DCAF11Q8TEB1 546 aa25.18■■□□□ 1.62
RPA1-203ENST00000571058 WAPLQ7Z5K2 1190 aa25.17■■□□□ 1.62
RPA1-203ENST00000571058 DLC1Q96QB1 1528 aa25.13■■□□□ 1.61
RPA1-203ENST00000571058 RGS17Q9UGC6 210 aaPredicted RBP25.13■■□□□ 1.61
RPA1-203ENST00000571058 KDM2AQ9Y2K7 1162 aa25.13■■□□□ 1.61
RPA1-203ENST00000571058 ORAI2Q96SN7 254 aa25.12■■□□□ 1.61
RPA1-203ENST00000571058 PLEKHH1Q9ULM0 1364 aa25.12■■□□□ 1.61
RPA1-203ENST00000571058 ADGRB1O14514 1584 aa25.11■■□□□ 1.61
RPA1-203ENST00000571058 SOS2Q07890 1332 aaPredicted RBP25.1■■□□□ 1.61
RPA1-203ENST00000571058 ESCO1Q5FWF5 840 aa25.09■■□□□ 1.61
RPA1-203ENST00000571058 MEX3CQ5U5Q3 659 aaKnown RBP25.09■■□□□ 1.61
RPA1-203ENST00000571058 NPHP3Q7Z494 1330 aa25.09■■□□□ 1.61
RPA1-203ENST00000571058 LRP6O75581 1613 aa25.08■■□□□ 1.61
RPA1-203ENST00000571058 FMN2Q9NZ56 1722 aa25.08■■□□□ 1.61
RPA1-203ENST00000571058 DDX17Q92841 729 aaKnown RBP25.07■■□□□ 1.6
RPA1-203ENST00000571058 PRAM1Q96QH2 718 aa25.07■■□□□ 1.6
RPA1-203ENST00000571058 PNPLA6Q8IY17 1366 aa25.06■■□□□ 1.6
RPA1-203ENST00000571058 POGKQ9P215 609 aa25.06■■□□□ 1.6
RPA1-203ENST00000571058 KIF1AQ12756 1690 aa25.02■■□□□ 1.6
RPA1-203ENST00000571058 ZNF772Q68DY9 489 aaPredicted RBP25.02■■□□□ 1.6
RPA1-203ENST00000571058 KIAA1210Q9ULL0 1709 aa25.01■■□□□ 1.59
RPA1-203ENST00000571058 NUTM2BA6NNL0 878 aaPredicted RBP25.01■■□□□ 1.59
RPA1-203ENST00000571058 NUTM2EB1AL46 878 aaPredicted RBP25.01■■□□□ 1.59
RPA1-203ENST00000571058 POTEAQ6S8J7 498 aa25.01■■□□□ 1.59
RPA1-203ENST00000571058 NUTM2AQ8IVF1 878 aaPredicted RBP25.01■■□□□ 1.59
RPA1-203ENST00000571058 TRAK1Q9UPV9 953 aa25.01■■□□□ 1.59
RPA1-203ENST00000571058 ADGRB2O60241 1585 aa25.01■■□□□ 1.59
RPA1-203ENST00000571058 NUTM2FA1L443 756 aa24.99■■□□□ 1.59
RPA1-203ENST00000571058 FOXO3O43524 673 aa24.99■■□□□ 1.59
RPA1-203ENST00000571058 PXDNQ92626 1479 aa24.99■■□□□ 1.59
RPA1-203ENST00000571058 EIF3AQ14152 1382 aaKnown RBP24.98■■□□□ 1.59
RPA1-203ENST00000571058 SAFB2Q14151 953 aaKnown RBP eCLIP24.98■■□□□ 1.59
RPA1-203ENST00000571058 ANKARQ7Z5J8 1434 aa24.97■■□□□ 1.59
RPA1-203ENST00000571058 COL22A1Q8NFW1 1626 aaPredicted RBP24.96■■□□□ 1.59
RPA1-203ENST00000571058 ARHGEF28Q8N1W1 1705 aaKnown RBP24.93■■□□□ 1.58
RPA1-203ENST00000571058 PHF8Q9UPP1 1060 aa24.93■■□□□ 1.58
RPA1-203ENST00000571058 RGPD8O14715 1765 aaPredicted RBP24.93■■□□□ 1.58
RPA1-203ENST00000571058 PSME1Q06323 249 aa24.9■■□□□ 1.58
RPA1-203ENST00000571058 TRIM26Q12899 539 aaPredicted RBP24.9■■□□□ 1.58
RPA1-203ENST00000571058 AFF2P51816 1311 aa24.89■■□□□ 1.58
RPA1-203ENST00000571058 MINK1Q8N4C8 1332 aaPredicted RBP24.89■■□□□ 1.58
RPA1-203ENST00000571058 XPCQ01831 940 aaPredicted RBP24.89■■□□□ 1.58
RPA1-203ENST00000571058 C8orf37Q96NL8 207 aa24.89■■□□□ 1.58
RPA1-203ENST00000571058 TULP4Q9NRJ4 1543 aa24.88■■□□□ 1.57
RPA1-203ENST00000571058 WASLO00401 505 aaPredicted RBP24.88■■□□□ 1.57
RPA1-203ENST00000571058 KRT28Q7Z3Y7 464 aa24.88■■□□□ 1.57
RPA1-203ENST00000571058 HIRIP3Q9BW71 556 aaPredicted RBP24.88■■□□□ 1.57
RPA1-203ENST00000571058 USP32Q8NFA0 1604 aa24.87■■□□□ 1.57
RPA1-203ENST00000571058 L3MBTL2Q969R5 705 aa24.87■■□□□ 1.57
RPA1-203ENST00000571058 SPATA31A3Q5VYP0 1347 aa24.86■■□□□ 1.57
RPA1-203ENST00000571058 ADAMTS2O95450 1211 aa24.86■■□□□ 1.57
RPA1-203ENST00000571058 NGLY1Q96IV0 654 aa24.85■■□□□ 1.57
RPA1-203ENST00000571058 SIN3AQ96ST3 1273 aa24.85■■□□□ 1.57
RPA1-203ENST00000571058 SBNO1A3KN83 1393 aa24.84■■□□□ 1.57
RPA1-203ENST00000571058 RXRBP28702 533 aa24.83■■□□□ 1.57
RPA1-203ENST00000571058 TNS3Q68CZ2 1445 aa24.83■■□□□ 1.57
RPA1-203ENST00000571058 NBPF1Q3BBV0 1214 aa24.82■■□□□ 1.56
RPA1-203ENST00000571058 CDK12Q9NYV4 1490 aaPredicted RBP24.82■■□□□ 1.56
RPA1-203ENST00000571058 NEUROD1Q13562 356 aa24.81■■□□□ 1.56
RPA1-203ENST00000571058 ITSN1Q15811 1721 aa24.81■■□□□ 1.56
RPA1-203ENST00000571058 ARHGEF10O15013 1369 aa24.8■■□□□ 1.56
RPA1-203ENST00000571058 FNBP4Q8N3X1 1017 aaPredicted RBP24.8■■□□□ 1.56
RPA1-203ENST00000571058 MARF1Q9Y4F3 1742 aaKnown RBP24.8■■□□□ 1.56
RPA1-203ENST00000571058 PRR36Q9H6K5 1346 aa24.8■■□□□ 1.56
RPA1-203ENST00000571058 GPRASP1Q5JY77 1395 aa24.8■■□□□ 1.56
RPA1-203ENST00000571058 PMFBP1Q8TBY8 1022 aa24.79■■□□□ 1.56
RPA1-203ENST00000571058 QTRT2Q9H974 415 aaKnown RBP24.78■■□□□ 1.56
RPA1-203ENST00000571058 ATP7BP35670 1465 aa24.77■■□□□ 1.56
RPA1-203ENST00000571058 RBM6P78332 1123 aaKnown RBP24.76■■□□□ 1.55
RPA1-203ENST00000571058 NUDT16Q96DE0 195 aaKnown RBP24.76■■□□□ 1.55
RPA1-203ENST00000571058 USP21Q9UK80 565 aa24.76■■□□□ 1.55
RPA1-203ENST00000571058 CENPJQ9HC77 1338 aaPredicted RBP24.76■■□□□ 1.55
RPA1-203ENST00000571058 TRPM1Q7Z4N2 1603 aa24.75■■□□□ 1.55
RPA1-203ENST00000571058 CDK19Q9BWU1 502 aa24.75■■□□□ 1.55
RPA1-203ENST00000571058 NGDNQ8NEJ9 315 aaKnown RBP24.74■■□□□ 1.55
RPA1-203ENST00000571058 TRPC5Q9UL62 973 aaPredicted RBP24.74■■□□□ 1.55
RPA1-203ENST00000571058 TRPM3Q9HCF6 1732 aaPredicted RBP24.73■■□□□ 1.55
RPA1-203ENST00000571058 HAP1P54257 671 aaPredicted RBP24.73■■□□□ 1.55
RPA1-203ENST00000571058 CCDC61Q9Y6R9 512 aa24.72■■□□□ 1.55
RPA1-203ENST00000571058 ROCK2O75116 1388 aaKnown RBP24.71■■□□□ 1.55
RPA1-203ENST00000571058 LMOD2Q6P5Q4 547 aa24.71■■□□□ 1.55
RPA1-203ENST00000571058 QRICH2Q9H0J4 1663 aa24.69■■□□□ 1.54
RPA1-203ENST00000571058 ATRNO75882 1429 aa24.69■■□□□ 1.54
RPA1-203ENST00000571058 TOPAZ1Q8N9V7 1692 aa24.69■■□□□ 1.54
RPA1-203ENST00000571058 ALS2Q96Q42 1657 aa24.69■■□□□ 1.54
RPA1-203ENST00000571058 TONSLQ96HA7 1378 aa24.68■■□□□ 1.54
RPA1-203ENST00000571058 BCL9LQ86UU0 1499 aa24.68■■□□□ 1.54
RPA1-203ENST00000571058 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.67■■□□□ 1.54
RPA1-203ENST00000571058 POLR3AO14802 1390 aaPredicted RBP24.67■■□□□ 1.54
RPA1-203ENST00000571058 ABCA3Q99758 1704 aa24.66■■□□□ 1.54
RPA1-203ENST00000571058 PLEKHG3A1L390 1219 aa24.66■■□□□ 1.54
RPA1-203ENST00000571058 SLIT2O94813 1529 aa24.66■■□□□ 1.54
RPA1-203ENST00000571058 SRPK2P78362 688 aaKnown RBP24.65■■□□□ 1.54
RPA1-203ENST00000571058 RGS12O14924 1447 aa24.64■■□□□ 1.54
RPA1-203ENST00000571058 PAK3O75914 559 aaPredicted RBP24.63■■□□□ 1.53
RPA1-203ENST00000571058 UNC5CLQ8IV45 518 aa24.63■■□□□ 1.53
RPA1-203ENST00000571058 CABLES1Q8TDN4 633 aa24.63■■□□□ 1.53
RPA1-203ENST00000571058 ACEP12821 1306 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms