RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 UPF2Q9HAU5 1272 aaKnown RBP14.98□□□□□ -0.01
PDXDC1-217ENST00000570001 WAPLQ7Z5K2 1190 aa14.98□□□□□ -0.01
PDXDC1-217ENST00000570001 BCL2L13Q9BXK5 485 aa14.97□□□□□ -0.01
PDXDC1-217ENST00000570001 NPC1L1Q9UHC9 1359 aa14.97□□□□□ -0.01
PDXDC1-217ENST00000570001 PIK3C2GO75747 1445 aa14.97□□□□□ -0.01
PDXDC1-217ENST00000570001 SLFN5Q08AF3 891 aa14.96□□□□□ -0.01
PDXDC1-217ENST00000570001 CLUAP1Q96AJ1 413 aa14.96□□□□□ -0.01
PDXDC1-217ENST00000570001 MADDQ8WXG6 1647 aa14.96□□□□□ -0.01
PDXDC1-217ENST00000570001 SMC4Q9NTJ3 1288 aa14.96□□□□□ -0.01
PDXDC1-217ENST00000570001 NOP58Q9Y2X3 529 aaKnown RBP14.95□□□□□ -0.02
PDXDC1-217ENST00000570001 CALD1Q05682 793 aaKnown RBP14.95□□□□□ -0.02
PDXDC1-217ENST00000570001 CENPQQ7L2Z9 268 aaPredicted RBP14.95□□□□□ -0.02
PDXDC1-217ENST00000570001 ABCC3O15438 1527 aa14.95□□□□□ -0.02
PDXDC1-217ENST00000570001 RNF17Q9BXT8 1623 aaKnown RBP14.95□□□□□ -0.02
PDXDC1-217ENST00000570001 ZBTB7CA1YPR0 619 aa14.95□□□□□ -0.02
PDXDC1-217ENST00000570001 PLEKHG5O94827 1062 aa14.94□□□□□ -0.02
PDXDC1-217ENST00000570001 NGDNQ8NEJ9 315 aaKnown RBP14.94□□□□□ -0.02
PDXDC1-217ENST00000570001 NBR1Q14596 966 aa14.94□□□□□ -0.02
PDXDC1-217ENST00000570001 ANKRD36BQ8N2N9 1353 aa14.94□□□□□ -0.02
PDXDC1-217ENST00000570001 KDM5AP29375 1690 aaKnown RBP14.94□□□□□ -0.02
PDXDC1-217ENST00000570001 RIPK4P57078 832 aa14.94□□□□□ -0.02
PDXDC1-217ENST00000570001 DUSP27Q5VZP5 1158 aa14.94□□□□□ -0.02
PDXDC1-217ENST00000570001 PUS7Q96PZ0 661 aaKnown RBP14.94□□□□□ -0.02
PDXDC1-217ENST00000570001 SBNO2Q9Y2G9 1366 aa14.93□□□□□ -0.02
PDXDC1-217ENST00000570001 LAMC1P11047 1609 aa14.93□□□□□ -0.02
PDXDC1-217ENST00000570001 WWC1Q8IX03 1113 aa14.93□□□□□ -0.02
PDXDC1-217ENST00000570001 DDRGK1Q96HY6 314 aa14.93□□□□□ -0.02
PDXDC1-217ENST00000570001 COG6Q9Y2V7 657 aa14.93□□□□□ -0.02
PDXDC1-217ENST00000570001 MAP3K4Q9Y6R4 1608 aa14.93□□□□□ -0.02
PDXDC1-217ENST00000570001 FANCIQ9NVI1 1328 aa14.93□□□□□ -0.02
PDXDC1-217ENST00000570001 KIDINS220Q9ULH0 1771 aa14.93□□□□□ -0.02
PDXDC1-217ENST00000570001 NSD2O96028 1365 aa14.93□□□□□ -0.02
PDXDC1-217ENST00000570001 NINLQ9Y2I6 1382 aa14.93□□□□□ -0.02
PDXDC1-217ENST00000570001 ERVK-7P63135 1459 aa14.92□□□□□ -0.02
PDXDC1-217ENST00000570001 IPO8O15397 1037 aaKnown RBP14.92□□□□□ -0.02
PDXDC1-217ENST00000570001 SYNMO15061 1565 aa14.92□□□□□ -0.02
PDXDC1-217ENST00000570001 BCAR3O75815 825 aa14.92□□□□□ -0.02
PDXDC1-217ENST00000570001 CEP152O94986 1710 aa14.91□□□□□ -0.02
PDXDC1-217ENST00000570001 LMTK2Q8IWU2 1503 aa14.91□□□□□ -0.02
PDXDC1-217ENST00000570001 ITPRIPQ8IWB1 547 aa14.9□□□□□ -0.02
PDXDC1-217ENST00000570001 PPRC1Q5VV67 1664 aaKnown RBP14.9□□□□□ -0.02
PDXDC1-217ENST00000570001 RIMS2Q9UQ26 1411 aa14.9□□□□□ -0.02
PDXDC1-217ENST00000570001 PDE4AP27815 886 aa14.9□□□□□ -0.02
PDXDC1-217ENST00000570001 INSRP06213 1382 aa14.9□□□□□ -0.02
PDXDC1-217ENST00000570001 WDR63Q8IWG1 891 aa14.9□□□□□ -0.02
PDXDC1-217ENST00000570001 PMFBP1Q8TBY8 1022 aa14.9□□□□□ -0.02
PDXDC1-217ENST00000570001 POLR3AO14802 1390 aaPredicted RBP14.9□□□□□ -0.02
PDXDC1-217ENST00000570001 BLMP54132 1417 aaPredicted RBP14.9□□□□□ -0.02
PDXDC1-217ENST00000570001 PAK3O75914 559 aaPredicted RBP14.89□□□□□ -0.03
PDXDC1-217ENST00000570001 HMOX1P09601 288 aa14.89□□□□□ -0.03
PDXDC1-217ENST00000570001 PLEKHH1Q9ULM0 1364 aa14.89□□□□□ -0.03
PDXDC1-217ENST00000570001 LMOD3Q0VAK6 560 aa14.89□□□□□ -0.03
PDXDC1-217ENST00000570001 SLC26A8Q96RN1 970 aa14.89□□□□□ -0.03
PDXDC1-217ENST00000570001 YTHDC2Q9H6S0 1430 aaKnown RBP14.89□□□□□ -0.03
PDXDC1-217ENST00000570001 RWDD1Q9H446 243 aaPredicted RBP14.89□□□□□ -0.03
PDXDC1-217ENST00000570001 ZKSCAN2Q63HK3 967 aa14.88□□□□□ -0.03
PDXDC1-217ENST00000570001 PANK1Q8TE04 598 aa14.88□□□□□ -0.03
PDXDC1-217ENST00000570001 NUDT16Q96DE0 195 aaKnown RBP14.88□□□□□ -0.03
PDXDC1-217ENST00000570001 CHMP4BQ9H444 224 aaKnown RBP14.88□□□□□ -0.03
PDXDC1-217ENST00000570001 CCDC61Q9Y6R9 512 aa14.88□□□□□ -0.03
PDXDC1-217ENST00000570001 DEPDC5O75140 1603 aa14.88□□□□□ -0.03
PDXDC1-217ENST00000570001 TNRQ92752 1358 aa14.88□□□□□ -0.03
PDXDC1-217ENST00000570001 C20orf194Q5TEA3 1177 aa14.87□□□□□ -0.03
PDXDC1-217ENST00000570001 TSPOAP1O95153 1857 aa14.87□□□□□ -0.03
PDXDC1-217ENST00000570001 RNF123Q5XPI4 1314 aa14.87□□□□□ -0.03
PDXDC1-217ENST00000570001 NKTRP30414 1462 aaKnown RBP14.87□□□□□ -0.03
PDXDC1-217ENST00000570001 WASLO00401 505 aaPredicted RBP14.87□□□□□ -0.03
PDXDC1-217ENST00000570001 CEBPAP49715 358 aaPredicted RBP14.87□□□□□ -0.03
PDXDC1-217ENST00000570001 LMOD2Q6P5Q4 547 aa14.87□□□□□ -0.03
PDXDC1-217ENST00000570001 ARHGAP31Q2M1Z3 1444 aa14.86□□□□□ -0.03
PDXDC1-217ENST00000570001 PRKAR2BP31323 418 aa14.86□□□□□ -0.03
PDXDC1-217ENST00000570001 ZMYM3Q14202 1370 aa14.86□□□□□ -0.03
PDXDC1-217ENST00000570001 ADGRB3O60242 1522 aa14.86□□□□□ -0.03
PDXDC1-217ENST00000570001 THEMISQ8N1K5 641 aaPredicted RBP14.86□□□□□ -0.03
PDXDC1-217ENST00000570001 IPO9Q96P70 1041 aaKnown RBP14.86□□□□□ -0.03
PDXDC1-217ENST00000570001 ABCA6Q8N139 1617 aa14.86□□□□□ -0.03
PDXDC1-217ENST00000570001 VWDEQ8N2E2 1590 aa14.86□□□□□ -0.03
PDXDC1-217ENST00000570001 RTF1Q92541 710 aaKnown RBP14.86□□□□□ -0.03
PDXDC1-217ENST00000570001 ZNF692Q9BU19 519 aaPredicted RBP14.86□□□□□ -0.03
PDXDC1-217ENST00000570001 FYB1O15117 783 aa14.85□□□□□ -0.03
PDXDC1-217ENST00000570001 AMPHP49418 695 aa14.85□□□□□ -0.03
PDXDC1-217ENST00000570001 A0A1W2PP64 1363 aa14.85□□□□□ -0.03
PDXDC1-217ENST00000570001 PDE3AQ14432 1141 aa14.85□□□□□ -0.03
PDXDC1-217ENST00000570001 HAP1P54257 671 aaPredicted RBP14.85□□□□□ -0.03
PDXDC1-217ENST00000570001 ZMYM4Q5VZL5 1548 aa14.84□□□□□ -0.03
PDXDC1-217ENST00000570001 TSR2Q969E8 191 aaKnown RBP14.84□□□□□ -0.03
PDXDC1-217ENST00000570001 ELL2O00472 640 aaPredicted RBP14.83□□□□□ -0.04
PDXDC1-217ENST00000570001 TMPOP42166 694 aaKnown RBP14.83□□□□□ -0.04
PDXDC1-217ENST00000570001 DZIP1LQ8IYY4 767 aaKnown RBP14.83□□□□□ -0.04
PDXDC1-217ENST00000570001 DIP2CQ9Y2E4 1556 aa14.83□□□□□ -0.04
PDXDC1-217ENST00000570001 EXOSC9Q06265 439 aaKnown RBP14.82□□□□□ -0.04
PDXDC1-217ENST00000570001 NME9Q86XW9 330 aa14.81□□□□□ -0.04
PDXDC1-217ENST00000570001 FCHSD2O94868 740 aa14.81□□□□□ -0.04
PDXDC1-217ENST00000570001 CAMSAP1Q5T5Y3 1602 aa14.8□□□□□ -0.04
PDXDC1-217ENST00000570001 RRS1Q15050 365 aaKnown RBP14.8□□□□□ -0.04
PDXDC1-217ENST00000570001 FAM161AQ3B820 660 aa14.8□□□□□ -0.04
PDXDC1-217ENST00000570001 IQGAP1P46940 1657 aa14.8□□□□□ -0.04
PDXDC1-217ENST00000570001 BECN1Q14457 450 aa14.79□□□□□ -0.04
PDXDC1-217ENST00000570001 GNAI1P63096 354 aa14.79□□□□□ -0.04
PDXDC1-217ENST00000570001 MROH1Q8NDA8 1641 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms