RNA–Protein interactions for RNA: ENST00000566398.1

CPNE7-208, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-208ENST00000566398 SIRT1Q96EB6 747 aa27.65■■■□□ 2.02
CPNE7-208ENST00000566398 SPATA31A6Q5VVP1 1343 aa27.65■■■□□ 2.02
CPNE7-208ENST00000566398 ORAI2Q96SN7 254 aa27.63■■■□□ 2.01
CPNE7-208ENST00000566398 NHSL1Q5SYE7 1610 aa27.62■■■□□ 2.01
CPNE7-208ENST00000566398 SOCS7O14512 581 aa27.61■■■□□ 2.01
CPNE7-208ENST00000566398 DDX17Q92841 729 aaKnown RBP27.61■■■□□ 2.01
CPNE7-208ENST00000566398 ADGRB1O14514 1584 aa27.6■■■□□ 2.01
CPNE7-208ENST00000566398 LRRC59Q96AG4 307 aaKnown RBP27.59■■■□□ 2.01
CPNE7-208ENST00000566398 PRAM1Q96QH2 718 aa27.59■■■□□ 2.01
CPNE7-208ENST00000566398 DLC1Q96QB1 1528 aa27.57■■■□□ 2
CPNE7-208ENST00000566398 SHPRHQ149N8 1683 aa27.57■■■□□ 2
CPNE7-208ENST00000566398 ESCO1Q5FWF5 840 aa27.57■■■□□ 2
CPNE7-208ENST00000566398 RGS17Q9UGC6 210 aaPredicted RBP27.57■■■□□ 2
CPNE7-208ENST00000566398 POGKQ9P215 609 aa27.56■■■□□ 2
CPNE7-208ENST00000566398 LRP6O75581 1613 aa27.56■■■□□ 2
CPNE7-208ENST00000566398 NUTM2FA1L443 756 aa27.55■■■□□ 2
CPNE7-208ENST00000566398 SAFB2Q14151 953 aaKnown RBP eCLIP27.54■■■□□ 2
CPNE7-208ENST00000566398 MEX3CQ5U5Q3 659 aaKnown RBP27.54■■■□□ 2
CPNE7-208ENST00000566398 TRAK1Q9UPV9 953 aa27.54■■■□□ 2
CPNE7-208ENST00000566398 SOS2Q07890 1332 aaPredicted RBP27.53■■■□□ 2
CPNE7-208ENST00000566398 PNPLA6Q8IY17 1366 aa27.52■■■□□ 2
CPNE7-208ENST00000566398 NPHP3Q7Z494 1330 aa27.52■■■□□ 2
CPNE7-208ENST00000566398 NUTM2BA6NNL0 878 aaPredicted RBP27.51■■□□□ 1.99
CPNE7-208ENST00000566398 NUTM2EB1AL46 878 aaPredicted RBP27.51■■□□□ 1.99
CPNE7-208ENST00000566398 NUTM2AQ8IVF1 878 aaPredicted RBP27.51■■□□□ 1.99
CPNE7-208ENST00000566398 FMN2Q9NZ56 1722 aa27.47■■□□□ 1.99
CPNE7-208ENST00000566398 FOXO3O43524 673 aa27.46■■□□□ 1.99
CPNE7-208ENST00000566398 TRIM26Q12899 539 aaPredicted RBP27.46■■□□□ 1.99
CPNE7-208ENST00000566398 POTEAQ6S8J7 498 aa27.45■■□□□ 1.98
CPNE7-208ENST00000566398 PXDNQ92626 1479 aa27.43■■□□□ 1.98
CPNE7-208ENST00000566398 ADGRB2O60241 1585 aa27.43■■□□□ 1.98
CPNE7-208ENST00000566398 MINK1Q8N4C8 1332 aaPredicted RBP27.41■■□□□ 1.98
CPNE7-208ENST00000566398 XPCQ01831 940 aaPredicted RBP27.41■■□□□ 1.98
CPNE7-208ENST00000566398 SIN3AQ96ST3 1273 aa27.41■■□□□ 1.98
CPNE7-208ENST00000566398 HIRIP3Q9BW71 556 aaPredicted RBP27.41■■□□□ 1.98
CPNE7-208ENST00000566398 ANKARQ7Z5J8 1434 aa27.41■■□□□ 1.98
CPNE7-208ENST00000566398 EIF3AQ14152 1382 aaKnown RBP27.39■■□□□ 1.98
CPNE7-208ENST00000566398 NEUROD1Q13562 356 aa27.39■■□□□ 1.98
CPNE7-208ENST00000566398 ZNF772Q68DY9 489 aaPredicted RBP27.39■■□□□ 1.98
CPNE7-208ENST00000566398 L3MBTL2Q969R5 705 aa27.39■■□□□ 1.98
CPNE7-208ENST00000566398 PHF8Q9UPP1 1060 aa27.39■■□□□ 1.98
CPNE7-208ENST00000566398 KIF1AQ12756 1690 aa27.39■■□□□ 1.97
CPNE7-208ENST00000566398 KIAA1210Q9ULL0 1709 aa27.37■■□□□ 1.97
CPNE7-208ENST00000566398 NBPF1Q3BBV0 1214 aa27.35■■□□□ 1.97
CPNE7-208ENST00000566398 C8orf37Q96NL8 207 aa27.35■■□□□ 1.97
CPNE7-208ENST00000566398 WASLO00401 505 aaPredicted RBP27.34■■□□□ 1.97
CPNE7-208ENST00000566398 ADAMTS2O95450 1211 aa27.34■■□□□ 1.97
CPNE7-208ENST00000566398 AFF2P51816 1311 aa27.33■■□□□ 1.97
CPNE7-208ENST00000566398 ARHGEF28Q8N1W1 1705 aaKnown RBP27.33■■□□□ 1.96
CPNE7-208ENST00000566398 TULP4Q9NRJ4 1543 aa27.32■■□□□ 1.96
CPNE7-208ENST00000566398 KRT28Q7Z3Y7 464 aa27.32■■□□□ 1.96
CPNE7-208ENST00000566398 COL22A1Q8NFW1 1626 aaPredicted RBP27.31■■□□□ 1.96
CPNE7-208ENST00000566398 PSME1Q06323 249 aa27.3■■□□□ 1.96
CPNE7-208ENST00000566398 SPATA31A3Q5VYP0 1347 aa27.3■■□□□ 1.96
CPNE7-208ENST00000566398 PMFBP1Q8TBY8 1022 aa27.29■■□□□ 1.96
CPNE7-208ENST00000566398 PRR36Q9H6K5 1346 aa27.29■■□□□ 1.96
CPNE7-208ENST00000566398 USP32Q8NFA0 1604 aa27.29■■□□□ 1.96
CPNE7-208ENST00000566398 TNS3Q68CZ2 1445 aa27.27■■□□□ 1.96
CPNE7-208ENST00000566398 NGLY1Q96IV0 654 aa27.27■■□□□ 1.96
CPNE7-208ENST00000566398 SBNO1A3KN83 1393 aa27.24■■□□□ 1.95
CPNE7-208ENST00000566398 CENPJQ9HC77 1338 aaPredicted RBP27.23■■□□□ 1.95
CPNE7-208ENST00000566398 ATP7BP35670 1465 aa27.23■■□□□ 1.95
CPNE7-208ENST00000566398 RXRBP28702 533 aa27.22■■□□□ 1.95
CPNE7-208ENST00000566398 RGPD8O14715 1765 aaPredicted RBP27.22■■□□□ 1.95
CPNE7-208ENST00000566398 ROCK2O75116 1388 aaKnown RBP27.22■■□□□ 1.95
CPNE7-208ENST00000566398 GPRASP1Q5JY77 1395 aa27.22■■□□□ 1.95
CPNE7-208ENST00000566398 CDK19Q9BWU1 502 aa27.21■■□□□ 1.95
CPNE7-208ENST00000566398 ARHGEF10O15013 1369 aa27.21■■□□□ 1.95
CPNE7-208ENST00000566398 NUDT16Q96DE0 195 aaKnown RBP27.2■■□□□ 1.94
CPNE7-208ENST00000566398 TONSLQ96HA7 1378 aa27.2■■□□□ 1.94
CPNE7-208ENST00000566398 LMOD2Q6P5Q4 547 aa27.19■■□□□ 1.94
CPNE7-208ENST00000566398 NGDNQ8NEJ9 315 aaKnown RBP27.19■■□□□ 1.94
CPNE7-208ENST00000566398 TRPM1Q7Z4N2 1603 aa27.17■■□□□ 1.94
CPNE7-208ENST00000566398 HAP1P54257 671 aaPredicted RBP27.17■■□□□ 1.94
CPNE7-208ENST00000566398 FNBP4Q8N3X1 1017 aaPredicted RBP27.17■■□□□ 1.94
CPNE7-208ENST00000566398 QTRT2Q9H974 415 aaKnown RBP27.17■■□□□ 1.94
CPNE7-208ENST00000566398 USP21Q9UK80 565 aa27.17■■□□□ 1.94
CPNE7-208ENST00000566398 CDK12Q9NYV4 1490 aaPredicted RBP27.13■■□□□ 1.93
CPNE7-208ENST00000566398 PLEKHG5O94827 1062 aa27.13■■□□□ 1.93
CPNE7-208ENST00000566398 RBM6P78332 1123 aaKnown RBP27.13■■□□□ 1.93
CPNE7-208ENST00000566398 SRPK2P78362 688 aaKnown RBP27.13■■□□□ 1.93
CPNE7-208ENST00000566398 NBPF8Q3BBV2 869 aa27.13■■□□□ 1.93
CPNE7-208ENST00000566398 CCDC61Q9Y6R9 512 aa27.13■■□□□ 1.93
CPNE7-208ENST00000566398 CABLES1Q8TDN4 633 aa27.11■■□□□ 1.93
CPNE7-208ENST00000566398 TRPC5Q9UL62 973 aaPredicted RBP27.11■■□□□ 1.93
CPNE7-208ENST00000566398 ITSN1Q15811 1721 aa27.1■■□□□ 1.93
CPNE7-208ENST00000566398 PAK3O75914 559 aaPredicted RBP27.09■■□□□ 1.93
CPNE7-208ENST00000566398 POLR3AO14802 1390 aaPredicted RBP27.09■■□□□ 1.93
CPNE7-208ENST00000566398 QRICH2Q9H0J4 1663 aa27.08■■□□□ 1.93
CPNE7-208ENST00000566398 TRPM3Q9HCF6 1732 aaPredicted RBP27.08■■□□□ 1.93
CPNE7-208ENST00000566398 ATRNO75882 1429 aa27.07■■□□□ 1.92
CPNE7-208ENST00000566398 BCL9LQ86UU0 1499 aa27.07■■□□□ 1.92
CPNE7-208ENST00000566398 PLEKHG3A1L390 1219 aa27.07■■□□□ 1.92
CPNE7-208ENST00000566398 CABP2Q9NPB3 220 aa27.07■■□□□ 1.92
CPNE7-208ENST00000566398 TOPAZ1Q8N9V7 1692 aa27.06■■□□□ 1.92
CPNE7-208ENST00000566398 ACEP12821 1306 aa27.06■■□□□ 1.92
CPNE7-208ENST00000566398 RGS12O14924 1447 aa27.06■■□□□ 1.92
CPNE7-208ENST00000566398 EVC2Q86UK5 1308 aa27.05■■□□□ 1.92
CPNE7-208ENST00000566398 PPIP5K1Q6PFW1 1433 aa27.05■■□□□ 1.92
CPNE7-208ENST00000566398 RALGAPBQ86X10 1494 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms