RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 DDX17Q92841 729 aaKnown RBP29.26■■■□□ 2.27
SHCBP1-203ENST00000564272 LRP6O75581 1613 aa29.24■■■□□ 2.27
SHCBP1-203ENST00000564272 KDM2AQ9Y2K7 1162 aa29.23■■■□□ 2.27
SHCBP1-203ENST00000564272 DCAF11Q8TEB1 546 aa29.22■■■□□ 2.27
SHCBP1-203ENST00000564272 ORAI2Q96SN7 254 aa29.22■■■□□ 2.27
SHCBP1-203ENST00000564272 DHX57Q6P158 1386 aaKnown RBP29.22■■■□□ 2.27
SHCBP1-203ENST00000564272 SPATA31A6Q5VVP1 1343 aa29.2■■■□□ 2.27
SHCBP1-203ENST00000564272 ADGRB1O14514 1584 aa29.19■■■□□ 2.26
SHCBP1-203ENST00000564272 FMN2Q9NZ56 1722 aa29.15■■■□□ 2.26
SHCBP1-203ENST00000564272 SIRT1Q96EB6 747 aa29.15■■■□□ 2.26
SHCBP1-203ENST00000564272 LRRC59Q96AG4 307 aaKnown RBP29.14■■■□□ 2.26
SHCBP1-203ENST00000564272 DLC1Q96QB1 1528 aa29.14■■■□□ 2.25
SHCBP1-203ENST00000564272 NUTM2FA1L443 756 aa29.13■■■□□ 2.25
SHCBP1-203ENST00000564272 ESCO1Q5FWF5 840 aa29.12■■■□□ 2.25
SHCBP1-203ENST00000564272 MEX3CQ5U5Q3 659 aaKnown RBP29.12■■■□□ 2.25
SHCBP1-203ENST00000564272 POTEAQ6S8J7 498 aa29.12■■■□□ 2.25
SHCBP1-203ENST00000564272 PRAM1Q96QH2 718 aa29.12■■■□□ 2.25
SHCBP1-203ENST00000564272 PNPLA6Q8IY17 1366 aa29.12■■■□□ 2.25
SHCBP1-203ENST00000564272 NUTM2BA6NNL0 878 aaPredicted RBP29.11■■■□□ 2.25
SHCBP1-203ENST00000564272 NUTM2EB1AL46 878 aaPredicted RBP29.11■■■□□ 2.25
SHCBP1-203ENST00000564272 SAFB2Q14151 953 aaKnown RBP eCLIP29.11■■■□□ 2.25
SHCBP1-203ENST00000564272 NUTM2AQ8IVF1 878 aaPredicted RBP29.11■■■□□ 2.25
SHCBP1-203ENST00000564272 STAC3Q96MF2 364 aa29.09■■■□□ 2.25
SHCBP1-203ENST00000564272 SOS2Q07890 1332 aaPredicted RBP29.09■■■□□ 2.25
SHCBP1-203ENST00000564272 TRAK1Q9UPV9 953 aa29.07■■■□□ 2.24
SHCBP1-203ENST00000564272 POGKQ9P215 609 aa29.05■■■□□ 2.24
SHCBP1-203ENST00000564272 PXDNQ92626 1479 aa29.04■■■□□ 2.24
SHCBP1-203ENST00000564272 NPHP3Q7Z494 1330 aa29.04■■■□□ 2.24
SHCBP1-203ENST00000564272 KIF1AQ12756 1690 aa29.02■■■□□ 2.24
SHCBP1-203ENST00000564272 ADGRB2O60241 1585 aa29.02■■■□□ 2.24
SHCBP1-203ENST00000564272 FOXO3O43524 673 aa29.02■■■□□ 2.24
SHCBP1-203ENST00000564272 XPCQ01831 940 aaPredicted RBP29.02■■■□□ 2.24
SHCBP1-203ENST00000564272 RGPD8O14715 1765 aaPredicted RBP29.01■■■□□ 2.23
SHCBP1-203ENST00000564272 ARHGEF28Q8N1W1 1705 aaKnown RBP29■■■□□ 2.23
SHCBP1-203ENST00000564272 COL22A1Q8NFW1 1626 aaPredicted RBP28.98■■■□□ 2.23
SHCBP1-203ENST00000564272 KIAA1210Q9ULL0 1709 aa28.97■■■□□ 2.23
SHCBP1-203ENST00000564272 HIRIP3Q9BW71 556 aaPredicted RBP28.97■■■□□ 2.23
SHCBP1-203ENST00000564272 USP32Q8NFA0 1604 aa28.97■■■□□ 2.23
SHCBP1-203ENST00000564272 MINK1Q8N4C8 1332 aaPredicted RBP28.96■■■□□ 2.23
SHCBP1-203ENST00000564272 ZNF772Q68DY9 489 aaPredicted RBP28.95■■■□□ 2.22
SHCBP1-203ENST00000564272 SIN3AQ96ST3 1273 aa28.94■■■□□ 2.22
SHCBP1-203ENST00000564272 AFF2P51816 1311 aa28.94■■■□□ 2.22
SHCBP1-203ENST00000564272 C8orf37Q96NL8 207 aa28.93■■■□□ 2.22
SHCBP1-203ENST00000564272 ADAMTS2O95450 1211 aa28.92■■■□□ 2.22
SHCBP1-203ENST00000564272 PHF8Q9UPP1 1060 aa28.92■■■□□ 2.22
SHCBP1-203ENST00000564272 ANKARQ7Z5J8 1434 aa28.92■■■□□ 2.22
SHCBP1-203ENST00000564272 TULP4Q9NRJ4 1543 aa28.89■■■□□ 2.21
SHCBP1-203ENST00000564272 NBPF1Q3BBV0 1214 aa28.88■■■□□ 2.21
SHCBP1-203ENST00000564272 L3MBTL2Q969R5 705 aa28.88■■■□□ 2.21
SHCBP1-203ENST00000564272 NEUROD1Q13562 356 aa28.86■■■□□ 2.21
SHCBP1-203ENST00000564272 KRT28Q7Z3Y7 464 aa28.86■■■□□ 2.21
SHCBP1-203ENST00000564272 PRR36Q9H6K5 1346 aa28.86■■■□□ 2.21
SHCBP1-203ENST00000564272 WASLO00401 505 aaPredicted RBP28.85■■■□□ 2.21
SHCBP1-203ENST00000564272 SPATA31A3Q5VYP0 1347 aa28.85■■■□□ 2.21
SHCBP1-203ENST00000564272 EIF3AQ14152 1382 aaKnown RBP28.85■■■□□ 2.21
SHCBP1-203ENST00000564272 PMFBP1Q8TBY8 1022 aa28.84■■■□□ 2.21
SHCBP1-203ENST00000564272 TRIM26Q12899 539 aaPredicted RBP28.83■■■□□ 2.21
SHCBP1-203ENST00000564272 TNS3Q68CZ2 1445 aa28.83■■■□□ 2.21
SHCBP1-203ENST00000564272 NGLY1Q96IV0 654 aa28.82■■■□□ 2.2
SHCBP1-203ENST00000564272 MARF1Q9Y4F3 1742 aaKnown RBP28.8■■■□□ 2.2
SHCBP1-203ENST00000564272 RXRBP28702 533 aa28.79■■■□□ 2.2
SHCBP1-203ENST00000564272 ATP7BP35670 1465 aa28.78■■■□□ 2.2
SHCBP1-203ENST00000564272 PSME1Q06323 249 aa28.78■■■□□ 2.2
SHCBP1-203ENST00000564272 SBNO1A3KN83 1393 aa28.77■■■□□ 2.2
SHCBP1-203ENST00000564272 TRPM1Q7Z4N2 1603 aa28.77■■■□□ 2.2
SHCBP1-203ENST00000564272 ITSN1Q15811 1721 aa28.76■■■□□ 2.19
SHCBP1-203ENST00000564272 TRPM3Q9HCF6 1732 aaPredicted RBP28.76■■■□□ 2.19
SHCBP1-203ENST00000564272 QTRT2Q9H974 415 aaKnown RBP28.75■■■□□ 2.19
SHCBP1-203ENST00000564272 CDK19Q9BWU1 502 aa28.73■■■□□ 2.19
SHCBP1-203ENST00000564272 USP21Q9UK80 565 aa28.73■■■□□ 2.19
SHCBP1-203ENST00000564272 CDK12Q9NYV4 1490 aaPredicted RBP28.72■■■□□ 2.19
SHCBP1-203ENST00000564272 ABCA3Q99758 1704 aa28.72■■■□□ 2.19
SHCBP1-203ENST00000564272 PLEKHG5O94827 1062 aa28.72■■■□□ 2.19
SHCBP1-203ENST00000564272 LMOD2Q6P5Q4 547 aa28.72■■■□□ 2.19
SHCBP1-203ENST00000564272 FNBP4Q8N3X1 1017 aaPredicted RBP28.72■■■□□ 2.19
SHCBP1-203ENST00000564272 NUDT16Q96DE0 195 aaKnown RBP28.72■■■□□ 2.19
SHCBP1-203ENST00000564272 QRICH2Q9H0J4 1663 aa28.72■■■□□ 2.19
SHCBP1-203ENST00000564272 CENPJQ9HC77 1338 aaPredicted RBP28.71■■■□□ 2.19
SHCBP1-203ENST00000564272 TOPAZ1Q8N9V7 1692 aa28.71■■■□□ 2.19
SHCBP1-203ENST00000564272 ARHGEF10O15013 1369 aa28.71■■■□□ 2.19
SHCBP1-203ENST00000564272 GPRASP1Q5JY77 1395 aa28.71■■■□□ 2.19
SHCBP1-203ENST00000564272 CABLES1Q8TDN4 633 aa28.69■■■□□ 2.18
SHCBP1-203ENST00000564272 ALS2Q96Q42 1657 aa28.69■■■□□ 2.18
SHCBP1-203ENST00000564272 RGS12O14924 1447 aa28.69■■■□□ 2.18
SHCBP1-203ENST00000564272 RBM6P78332 1123 aaKnown RBP28.68■■■□□ 2.18
SHCBP1-203ENST00000564272 NGDNQ8NEJ9 315 aaKnown RBP28.68■■■□□ 2.18
SHCBP1-203ENST00000564272 BCL9LQ86UU0 1499 aa28.67■■■□□ 2.18
SHCBP1-203ENST00000564272 ROCK2O75116 1388 aaKnown RBP28.67■■■□□ 2.18
SHCBP1-203ENST00000564272 ATRNO75882 1429 aa28.67■■■□□ 2.18
SHCBP1-203ENST00000564272 HAP1P54257 671 aaPredicted RBP28.66■■■□□ 2.18
SHCBP1-203ENST00000564272 TRPC5Q9UL62 973 aaPredicted RBP28.66■■■□□ 2.18
SHCBP1-203ENST00000564272 NBPF8Q3BBV2 869 aa28.64■■■□□ 2.18
SHCBP1-203ENST00000564272 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.62■■■□□ 2.17
SHCBP1-203ENST00000564272 SLIT2O94813 1529 aa28.62■■■□□ 2.17
SHCBP1-203ENST00000564272 TONSLQ96HA7 1378 aa28.61■■■□□ 2.17
SHCBP1-203ENST00000564272 PAK3O75914 559 aaPredicted RBP28.6■■■□□ 2.17
SHCBP1-203ENST00000564272 SRPK2P78362 688 aaKnown RBP28.6■■■□□ 2.17
SHCBP1-203ENST00000564272 CCDC61Q9Y6R9 512 aa28.6■■■□□ 2.17
SHCBP1-203ENST00000564272 PLCH1Q4KWH8 1693 aa28.6■■■□□ 2.17
SHCBP1-203ENST00000564272 CABP2Q9NPB3 220 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms