RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 KDM2AQ9Y2K7 1162 aa16.28■□□□□ 0.2
LPCAT4-202ENST00000562404 ADGRB1O14514 1584 aa16.28■□□□□ 0.2
LPCAT4-202ENST00000562404 LRP6O75581 1613 aa16.27■□□□□ 0.2
LPCAT4-202ENST00000562404 DCAF11Q8TEB1 546 aa16.27■□□□□ 0.2
LPCAT4-202ENST00000562404 ORAI2Q96SN7 254 aa16.27■□□□□ 0.2
LPCAT4-202ENST00000562404 RGPD8O14715 1765 aaPredicted RBP16.26■□□□□ 0.19
LPCAT4-202ENST00000562404 FMN2Q9NZ56 1722 aa16.25■□□□□ 0.19
LPCAT4-202ENST00000562404 PHF23Q9BUL5 403 aaPredicted RBP16.25■□□□□ 0.19
LPCAT4-202ENST00000562404 NUTM2FA1L443 756 aa16.22■□□□□ 0.19
LPCAT4-202ENST00000562404 DLC1Q96QB1 1528 aa16.21■□□□□ 0.19
LPCAT4-202ENST00000562404 SOCS7O14512 581 aa16.21■□□□□ 0.19
LPCAT4-202ENST00000562404 SIRT1Q96EB6 747 aa16.21■□□□□ 0.19
LPCAT4-202ENST00000562404 SAFB2Q14151 953 aaKnown RBP eCLIP16.2■□□□□ 0.18
LPCAT4-202ENST00000562404 ARHGEF28Q8N1W1 1705 aaKnown RBP16.19■□□□□ 0.18
LPCAT4-202ENST00000562404 POTEAQ6S8J7 498 aa16.19■□□□□ 0.18
LPCAT4-202ENST00000562404 PRAM1Q96QH2 718 aa16.19■□□□□ 0.18
LPCAT4-202ENST00000562404 TRAK1Q9UPV9 953 aa16.19■□□□□ 0.18
LPCAT4-202ENST00000562404 USP32Q8NFA0 1604 aa16.19■□□□□ 0.18
LPCAT4-202ENST00000562404 SPATA31A6Q5VVP1 1343 aa16.19■□□□□ 0.18
LPCAT4-202ENST00000562404 PNPLA6Q8IY17 1366 aa16.18■□□□□ 0.18
LPCAT4-202ENST00000562404 SIN3AQ96ST3 1273 aa16.18■□□□□ 0.18
LPCAT4-202ENST00000562404 SOS2Q07890 1332 aaPredicted RBP16.18■□□□□ 0.18
LPCAT4-202ENST00000562404 ESCO1Q5FWF5 840 aa16.17■□□□□ 0.18
LPCAT4-202ENST00000562404 KIAA1210Q9ULL0 1709 aa16.16■□□□□ 0.18
LPCAT4-202ENST00000562404 PXDNQ92626 1479 aa16.16■□□□□ 0.18
LPCAT4-202ENST00000562404 LRRC59Q96AG4 307 aaKnown RBP16.16■□□□□ 0.18
LPCAT4-202ENST00000562404 ADGRB2O60241 1585 aa16.16■□□□□ 0.18
LPCAT4-202ENST00000562404 NUTM2BA6NNL0 878 aaPredicted RBP16.15■□□□□ 0.18
LPCAT4-202ENST00000562404 NUTM2EB1AL46 878 aaPredicted RBP16.15■□□□□ 0.18
LPCAT4-202ENST00000562404 NUTM2AQ8IVF1 878 aaPredicted RBP16.15■□□□□ 0.18
LPCAT4-202ENST00000562404 STAC3Q96MF2 364 aa16.15■□□□□ 0.18
LPCAT4-202ENST00000562404 FOXO3O43524 673 aa16.14■□□□□ 0.17
LPCAT4-202ENST00000562404 XPCQ01831 940 aaPredicted RBP16.14■□□□□ 0.17
LPCAT4-202ENST00000562404 KIF1AQ12756 1690 aa16.14■□□□□ 0.17
LPCAT4-202ENST00000562404 NBPF1Q3BBV0 1214 aa16.13■□□□□ 0.17
LPCAT4-202ENST00000562404 HIRIP3Q9BW71 556 aaPredicted RBP16.13■□□□□ 0.17
LPCAT4-202ENST00000562404 POGKQ9P215 609 aa16.13■□□□□ 0.17
LPCAT4-202ENST00000562404 COL22A1Q8NFW1 1626 aaPredicted RBP16.12■□□□□ 0.17
LPCAT4-202ENST00000562404 L3MBTL2Q969R5 705 aa16.12■□□□□ 0.17
LPCAT4-202ENST00000562404 NPHP3Q7Z494 1330 aa16.11■□□□□ 0.17
LPCAT4-202ENST00000562404 MINK1Q8N4C8 1332 aaPredicted RBP16.11■□□□□ 0.17
LPCAT4-202ENST00000562404 MEX3CQ5U5Q3 659 aaKnown RBP16.1■□□□□ 0.17
LPCAT4-202ENST00000562404 TRIM26Q12899 539 aaPredicted RBP16.09■□□□□ 0.17
LPCAT4-202ENST00000562404 NEUROD1Q13562 356 aa16.09■□□□□ 0.17
LPCAT4-202ENST00000562404 PRR36Q9H6K5 1346 aa16.09■□□□□ 0.17
LPCAT4-202ENST00000562404 TRPM1Q7Z4N2 1603 aa16.08■□□□□ 0.16
LPCAT4-202ENST00000562404 MARF1Q9Y4F3 1742 aaKnown RBP16.08■□□□□ 0.16
LPCAT4-202ENST00000562404 PHF8Q9UPP1 1060 aa16.07■□□□□ 0.16
LPCAT4-202ENST00000562404 TULP4Q9NRJ4 1543 aa16.07■□□□□ 0.16
LPCAT4-202ENST00000562404 ANKARQ7Z5J8 1434 aa16.06■□□□□ 0.16
LPCAT4-202ENST00000562404 AFF2P51816 1311 aa16.06■□□□□ 0.16
LPCAT4-202ENST00000562404 ADAMTS2O95450 1211 aa16.06■□□□□ 0.16
LPCAT4-202ENST00000562404 PMFBP1Q8TBY8 1022 aa16.06■□□□□ 0.16
LPCAT4-202ENST00000562404 TRPM3Q9HCF6 1732 aaPredicted RBP16.05■□□□□ 0.16
LPCAT4-202ENST00000562404 WASLO00401 505 aaPredicted RBP16.05■□□□□ 0.16
LPCAT4-202ENST00000562404 KRT28Q7Z3Y7 464 aa16.05■□□□□ 0.16
LPCAT4-202ENST00000562404 C8orf37Q96NL8 207 aa16.05■□□□□ 0.16
LPCAT4-202ENST00000562404 SPATA31A3Q5VYP0 1347 aa16.04■□□□□ 0.16
LPCAT4-202ENST00000562404 ATP7BP35670 1465 aa16.03■□□□□ 0.16
LPCAT4-202ENST00000562404 ABCA3Q99758 1704 aa16.03■□□□□ 0.16
LPCAT4-202ENST00000562404 ITSN1Q15811 1721 aa16.02■□□□□ 0.16
LPCAT4-202ENST00000562404 TOPAZ1Q8N9V7 1692 aa16.02■□□□□ 0.16
LPCAT4-202ENST00000562404 QRICH2Q9H0J4 1663 aa16.02■□□□□ 0.16
LPCAT4-202ENST00000562404 NBPF8Q3BBV2 869 aa16.02■□□□□ 0.16
LPCAT4-202ENST00000562404 ZNF772Q68DY9 489 aaPredicted RBP16.02■□□□□ 0.16
LPCAT4-202ENST00000562404 ALS2Q96Q42 1657 aa16.01■□□□□ 0.15
LPCAT4-202ENST00000562404 TNS3Q68CZ2 1445 aa16.01■□□□□ 0.15
LPCAT4-202ENST00000562404 NGLY1Q96IV0 654 aa15.99■□□□□ 0.15
LPCAT4-202ENST00000562404 CDK19Q9BWU1 502 aa15.99■□□□□ 0.15
LPCAT4-202ENST00000562404 PSME1Q06323 249 aa15.98■□□□□ 0.15
LPCAT4-202ENST00000562404 CABLES1Q8TDN4 633 aa15.98■□□□□ 0.15
LPCAT4-202ENST00000562404 NUDT16Q96DE0 195 aaKnown RBP15.98■□□□□ 0.15
LPCAT4-202ENST00000562404 SBNO1A3KN83 1393 aa15.98■□□□□ 0.15
LPCAT4-202ENST00000562404 CRYBG1Q9Y4K1 1723 aa15.97■□□□□ 0.15
LPCAT4-202ENST00000562404 PLEKHG5O94827 1062 aa15.97■□□□□ 0.15
LPCAT4-202ENST00000562404 EIF3AQ14152 1382 aaKnown RBP15.97■□□□□ 0.15
LPCAT4-202ENST00000562404 CENPJQ9HC77 1338 aaPredicted RBP15.96■□□□□ 0.15
LPCAT4-202ENST00000562404 FNBP4Q8N3X1 1017 aaPredicted RBP15.96■□□□□ 0.15
LPCAT4-202ENST00000562404 QTRT2Q9H974 415 aaKnown RBP15.96■□□□□ 0.15
LPCAT4-202ENST00000562404 BCL9LQ86UU0 1499 aa15.96■□□□□ 0.14
LPCAT4-202ENST00000562404 RXRBP28702 533 aa15.95■□□□□ 0.14
LPCAT4-202ENST00000562404 LMOD2Q6P5Q4 547 aa15.94■□□□□ 0.14
LPCAT4-202ENST00000562404 USP21Q9UK80 565 aa15.94■□□□□ 0.14
LPCAT4-202ENST00000562404 ROCK2O75116 1388 aaKnown RBP15.94■□□□□ 0.14
LPCAT4-202ENST00000562404 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.94■□□□□ 0.14
LPCAT4-202ENST00000562404 PLCH1Q4KWH8 1693 aa15.93■□□□□ 0.14
LPCAT4-202ENST00000562404 NGDNQ8NEJ9 315 aaKnown RBP15.93■□□□□ 0.14
LPCAT4-202ENST00000562404 RGS12O14924 1447 aa15.93■□□□□ 0.14
LPCAT4-202ENST00000562404 ATRNO75882 1429 aa15.93■□□□□ 0.14
LPCAT4-202ENST00000562404 CDK12Q9NYV4 1490 aaPredicted RBP15.92■□□□□ 0.14
LPCAT4-202ENST00000562404 GPRASP1Q5JY77 1395 aa15.92■□□□□ 0.14
LPCAT4-202ENST00000562404 CABP2Q9NPB3 220 aa15.92■□□□□ 0.14
LPCAT4-202ENST00000562404 SLIT2O94813 1529 aa15.92■□□□□ 0.14
LPCAT4-202ENST00000562404 ARHGEF10O15013 1369 aa15.91■□□□□ 0.14
LPCAT4-202ENST00000562404 ACEP12821 1306 aa15.91■□□□□ 0.14
LPCAT4-202ENST00000562404 POLR3AO14802 1390 aaPredicted RBP15.9■□□□□ 0.14
LPCAT4-202ENST00000562404 TONSLQ96HA7 1378 aa15.9■□□□□ 0.14
LPCAT4-202ENST00000562404 RBM6P78332 1123 aaKnown RBP15.9■□□□□ 0.14
LPCAT4-202ENST00000562404 CCDC61Q9Y6R9 512 aa15.9■□□□□ 0.14
LPCAT4-202ENST00000562404 RALGAPBQ86X10 1494 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms