RNA–Protein interactions for RNA: ENST00000560935.1

IPO4-215, Transcript of importin 4, human

TSL 3

Gene IPO4, Length 701 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IPO4-215	ENST00000560935	SHPRH	Q149N8	1683 aa		29.19	■■■□□ 2.26
IPO4-215	ENST00000560935	SIRT1	Q96EB6	747 aa		29.17	■■■□□ 2.26
IPO4-215	ENST00000560935	PLEKHH1	Q9ULM0	1364 aa		29.16	■■■□□ 2.26
IPO4-215	ENST00000560935	SPATA31A6	Q5VVP1	1343 aa		29.15	■■■□□ 2.26
IPO4-215	ENST00000560935	ADGRB1	O14514	1584 aa		29.13	■■■□□ 2.25
IPO4-215	ENST00000560935	ORAI2	Q96SN7	254 aa		29.12	■■■□□ 2.25
IPO4-215	ENST00000560935	DLC1	Q96QB1	1528 aa		29.11	■■■□□ 2.25
IPO4-215	ENST00000560935	SOCS7	O14512	581 aa		29.11	■■■□□ 2.25
IPO4-215	ENST00000560935	DDX17	Q92841	729 aa	Known RBP	29.1	■■■□□ 2.25
IPO4-215	ENST00000560935	LRRC59	Q96AG4	307 aa	Known RBP	29.1	■■■□□ 2.25
IPO4-215	ENST00000560935	FMN2	Q9NZ56	1722 aa		29.08	■■■□□ 2.25
IPO4-215	ENST00000560935	ESCO1	Q5FWF5	840 aa		29.07	■■■□□ 2.24
IPO4-215	ENST00000560935	PRAM1	Q96QH2	718 aa		29.07	■■■□□ 2.24
IPO4-215	ENST00000560935	LRP6	O75581	1613 aa		29.06	■■■□□ 2.24
IPO4-215	ENST00000560935	RGS17	Q9UGC6	210 aa	Predicted RBP	29.06	■■■□□ 2.24
IPO4-215	ENST00000560935	POGK	Q9P215	609 aa		29.05	■■■□□ 2.24
IPO4-215	ENST00000560935	NUTM2F	A1L443	756 aa		29.04	■■■□□ 2.24
IPO4-215	ENST00000560935	MEX3C	Q5U5Q3	659 aa	Known RBP	29.04	■■■□□ 2.24
IPO4-215	ENST00000560935	SAFB2	Q14151	953 aa	Known RBP eCLIP	29.03	■■■□□ 2.24
IPO4-215	ENST00000560935	TRAK1	Q9UPV9	953 aa		29.03	■■■□□ 2.24
IPO4-215	ENST00000560935	SOS2	Q07890	1332 aa	Predicted RBP	29.02	■■■□□ 2.24
IPO4-215	ENST00000560935	NPHP3	Q7Z494	1330 aa		29.01	■■■□□ 2.23
IPO4-215	ENST00000560935	PNPLA6	Q8IY17	1366 aa		29.01	■■■□□ 2.23
IPO4-215	ENST00000560935	KIAA1210	Q9ULL0	1709 aa		29	■■■□□ 2.23
IPO4-215	ENST00000560935	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.99	■■■□□ 2.23
IPO4-215	ENST00000560935	NUTM2E	B1AL46	878 aa	Predicted RBP	28.99	■■■□□ 2.23
IPO4-215	ENST00000560935	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.99	■■■□□ 2.23
IPO4-215	ENST00000560935	KIF1A	Q12756	1690 aa		28.99	■■■□□ 2.23
IPO4-215	ENST00000560935	ADGRB2	O60241	1585 aa		28.98	■■■□□ 2.23
IPO4-215	ENST00000560935	TRIM26	Q12899	539 aa	Predicted RBP	28.96	■■■□□ 2.23
IPO4-215	ENST00000560935	ARHGEF28	Q8N1W1	1705 aa	Known RBP	28.95	■■■□□ 2.23
IPO4-215	ENST00000560935	RGPD8	O14715	1765 aa	Predicted RBP	28.94	■■■□□ 2.22
IPO4-215	ENST00000560935	PXDN	Q92626	1479 aa		28.94	■■■□□ 2.22
IPO4-215	ENST00000560935	FOXO3	O43524	673 aa		28.94	■■■□□ 2.22
IPO4-215	ENST00000560935	POTEA	Q6S8J7	498 aa		28.94	■■■□□ 2.22
IPO4-215	ENST00000560935	SIN3A	Q96ST3	1273 aa		28.91	■■■□□ 2.22
IPO4-215	ENST00000560935	MINK1	Q8N4C8	1332 aa	Predicted RBP	28.91	■■■□□ 2.22
IPO4-215	ENST00000560935	ANKAR	Q7Z5J8	1434 aa		28.9	■■■□□ 2.22
IPO4-215	ENST00000560935	EIF3A	Q14152	1382 aa	Known RBP	28.89	■■■□□ 2.22
IPO4-215	ENST00000560935	XPC	Q01831	940 aa	Predicted RBP	28.89	■■■□□ 2.22
IPO4-215	ENST00000560935	ZNF772	Q68DY9	489 aa	Predicted RBP	28.89	■■■□□ 2.22
IPO4-215	ENST00000560935	HIRIP3	Q9BW71	556 aa	Predicted RBP	28.89	■■■□□ 2.22
IPO4-215	ENST00000560935	COL22A1	Q8NFW1	1626 aa	Predicted RBP	28.89	■■■□□ 2.22
IPO4-215	ENST00000560935	NEUROD1	Q13562	356 aa		28.88	■■■□□ 2.21
IPO4-215	ENST00000560935	L3MBTL2	Q969R5	705 aa		28.88	■■■□□ 2.21
IPO4-215	ENST00000560935	PHF8	Q9UPP1	1060 aa		28.88	■■■□□ 2.21
IPO4-215	ENST00000560935	USP32	Q8NFA0	1604 aa		28.87	■■■□□ 2.21
IPO4-215	ENST00000560935	TULP4	Q9NRJ4	1543 aa		28.84	■■■□□ 2.21
IPO4-215	ENST00000560935	WASL	O00401	505 aa	Predicted RBP	28.83	■■■□□ 2.21
IPO4-215	ENST00000560935	NBPF1	Q3BBV0	1214 aa		28.83	■■■□□ 2.21
IPO4-215	ENST00000560935	KRT28	Q7Z3Y7	464 aa		28.82	■■■□□ 2.2
IPO4-215	ENST00000560935	C8orf37	Q96NL8	207 aa		28.82	■■■□□ 2.2
IPO4-215	ENST00000560935	AFF2	P51816	1311 aa		28.82	■■■□□ 2.2
IPO4-215	ENST00000560935	ADAMTS2	O95450	1211 aa		28.81	■■■□□ 2.2
IPO4-215	ENST00000560935	PSME1	Q06323	249 aa		28.8	■■■□□ 2.2
IPO4-215	ENST00000560935	SPATA31A3	Q5VYP0	1347 aa		28.79	■■■□□ 2.2
IPO4-215	ENST00000560935	PMFBP1	Q8TBY8	1022 aa		28.77	■■■□□ 2.2
IPO4-215	ENST00000560935	TRPM1	Q7Z4N2	1603 aa		28.76	■■■□□ 2.2
IPO4-215	ENST00000560935	PRR36	Q9H6K5	1346 aa		28.76	■■■□□ 2.19
IPO4-215	ENST00000560935	NGLY1	Q96IV0	654 aa		28.76	■■■□□ 2.19
IPO4-215	ENST00000560935	ITSN1	Q15811	1721 aa		28.76	■■■□□ 2.19
IPO4-215	ENST00000560935	TNS3	Q68CZ2	1445 aa		28.76	■■■□□ 2.19
IPO4-215	ENST00000560935	SBNO1	A3KN83	1393 aa		28.74	■■■□□ 2.19
IPO4-215	ENST00000560935	MARF1	Q9Y4F3	1742 aa	Known RBP	28.72	■■■□□ 2.19
IPO4-215	ENST00000560935	ATP7B	P35670	1465 aa		28.72	■■■□□ 2.19
IPO4-215	ENST00000560935	CENPJ	Q9HC77	1338 aa	Predicted RBP	28.71	■■■□□ 2.19
IPO4-215	ENST00000560935	RXRB	P28702	533 aa		28.7	■■■□□ 2.18
IPO4-215	ENST00000560935	CDK19	Q9BWU1	502 aa		28.7	■■■□□ 2.18
IPO4-215	ENST00000560935	GPRASP1	Q5JY77	1395 aa		28.7	■■■□□ 2.18
IPO4-215	ENST00000560935	NUDT16	Q96DE0	195 aa	Known RBP	28.69	■■■□□ 2.18
IPO4-215	ENST00000560935	ARHGEF10	O15013	1369 aa		28.69	■■■□□ 2.18
IPO4-215	ENST00000560935	QRICH2	Q9H0J4	1663 aa		28.68	■■■□□ 2.18
IPO4-215	ENST00000560935	ROCK2	O75116	1388 aa	Known RBP	28.68	■■■□□ 2.18
IPO4-215	ENST00000560935	NGDN	Q8NEJ9	315 aa	Known RBP	28.68	■■■□□ 2.18
IPO4-215	ENST00000560935	TONSL	Q96HA7	1378 aa		28.67	■■■□□ 2.18
IPO4-215	ENST00000560935	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28.67	■■■□□ 2.18
IPO4-215	ENST00000560935	LMOD2	Q6P5Q4	547 aa		28.67	■■■□□ 2.18
IPO4-215	ENST00000560935	QTRT2	Q9H974	415 aa	Known RBP	28.66	■■■□□ 2.18
IPO4-215	ENST00000560935	TOPAZ1	Q8N9V7	1692 aa		28.65	■■■□□ 2.18
IPO4-215	ENST00000560935	FNBP4	Q8N3X1	1017 aa	Predicted RBP	28.65	■■■□□ 2.18
IPO4-215	ENST00000560935	USP21	Q9UK80	565 aa		28.65	■■■□□ 2.18
IPO4-215	ENST00000560935	HAP1	P54257	671 aa	Predicted RBP	28.64	■■■□□ 2.18
IPO4-215	ENST00000560935	CDK12	Q9NYV4	1490 aa	Predicted RBP	28.64	■■■□□ 2.17
IPO4-215	ENST00000560935	RBM6	P78332	1123 aa	Known RBP	28.62	■■■□□ 2.17
IPO4-215	ENST00000560935	ABCA3	Q99758	1704 aa		28.62	■■■□□ 2.17
IPO4-215	ENST00000560935	ALS2	Q96Q42	1657 aa		28.61	■■■□□ 2.17
IPO4-215	ENST00000560935	CCDC61	Q9Y6R9	512 aa		28.61	■■■□□ 2.17
IPO4-215	ENST00000560935	SRPK2	P78362	688 aa	Known RBP	28.6	■■■□□ 2.17
IPO4-215	ENST00000560935	NBPF8	Q3BBV2	869 aa		28.6	■■■□□ 2.17
IPO4-215	ENST00000560935	TRPC5	Q9UL62	973 aa	Predicted RBP	28.6	■■■□□ 2.17
IPO4-215	ENST00000560935	PLEKHG5	O94827	1062 aa		28.58	■■■□□ 2.17
IPO4-215	ENST00000560935	CABLES1	Q8TDN4	633 aa		28.58	■■■□□ 2.17
IPO4-215	ENST00000560935	ATRN	O75882	1429 aa		28.56	■■■□□ 2.16
IPO4-215	ENST00000560935	PAK3	O75914	559 aa	Predicted RBP	28.56	■■■□□ 2.16
IPO4-215	ENST00000560935	BCL9L	Q86UU0	1499 aa		28.55	■■■□□ 2.16
IPO4-215	ENST00000560935	POLR3A	O14802	1390 aa	Predicted RBP	28.55	■■■□□ 2.16
IPO4-215	ENST00000560935	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	28.55	■■■□□ 2.16
IPO4-215	ENST00000560935	ACE	P12821	1306 aa		28.54	■■■□□ 2.16
IPO4-215	ENST00000560935	PLEKHG3	A1L390	1219 aa		28.54	■■■□□ 2.16
IPO4-215	ENST00000560935	CABP2	Q9NPB3	220 aa		28.54	■■■□□ 2.16

Retrieved 100 of 20,778 RNA–protein pairs in 56 ms