RNA–Protein interactions for RNA: ENST00000558077.1

ALPK3-202, Transcript of alpha kinase 3, humanhuman

TSL 3

Gene ALPK3, Length 487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-202ENST00000558077 AHDC1Q5TGY3 1603 aaPredicted RBP19.79■□□□□ 0.76
ALPK3-202ENST00000558077 SIN3AQ96ST3 1273 aa19.78■□□□□ 0.76
ALPK3-202ENST00000558077 C1orf167Q5SNV9 1468 aa19.77■□□□□ 0.76
ALPK3-202ENST00000558077 CDC42BPGQ6DT37 1551 aa19.75■□□□□ 0.75
ALPK3-202ENST00000558077 DLC1Q96QB1 1528 aa19.75■□□□□ 0.75
ALPK3-202ENST00000558077 NHSL1Q5SYE7 1610 aa19.74■□□□□ 0.75
ALPK3-202ENST00000558077 ORAI2Q96SN7 254 aa19.72■□□□□ 0.75
ALPK3-202ENST00000558077 L3MBTL2Q969R5 705 aa19.71■□□□□ 0.75
ALPK3-202ENST00000558077 KIAA1210Q9ULL0 1709 aa19.71■□□□□ 0.75
ALPK3-202ENST00000558077 DDX17Q92841 729 aaKnown RBP19.7■□□□□ 0.74
ALPK3-202ENST00000558077 PRAM1Q96QH2 718 aa19.7■□□□□ 0.74
ALPK3-202ENST00000558077 FMN2Q9NZ56 1722 aa19.69■□□□□ 0.74
ALPK3-202ENST00000558077 TRAK1Q9UPV9 953 aa19.69■□□□□ 0.74
ALPK3-202ENST00000558077 JCADQ9P266 1359 aa19.69■□□□□ 0.74
ALPK3-202ENST00000558077 NBPF1Q3BBV0 1214 aa19.67■□□□□ 0.74
ALPK3-202ENST00000558077 NEUROD1Q13562 356 aa19.66■□□□□ 0.74
ALPK3-202ENST00000558077 SHPRHQ149N8 1683 aa19.65■□□□□ 0.74
ALPK3-202ENST00000558077 ARHGEF28Q8N1W1 1705 aaKnown RBP19.65■□□□□ 0.74
ALPK3-202ENST00000558077 RGPD8O14715 1765 aaPredicted RBP19.65■□□□□ 0.74
ALPK3-202ENST00000558077 SAFB2Q14151 953 aaKnown RBP eCLIP19.65■□□□□ 0.74
ALPK3-202ENST00000558077 RGS17Q9UGC6 210 aaPredicted RBP19.64■□□□□ 0.73
ALPK3-202ENST00000558077 SOS2Q07890 1332 aaPredicted RBP19.64■□□□□ 0.73
ALPK3-202ENST00000558077 ADGRB2O60241 1585 aa19.63■□□□□ 0.73
ALPK3-202ENST00000558077 NUTM2FA1L443 756 aa19.63■□□□□ 0.73
ALPK3-202ENST00000558077 POGKQ9P215 609 aa19.63■□□□□ 0.73
ALPK3-202ENST00000558077 LRP6O75581 1613 aa19.62■□□□□ 0.73
ALPK3-202ENST00000558077 USP32Q8NFA0 1604 aa19.62■□□□□ 0.73
ALPK3-202ENST00000558077 ESCO1Q5FWF5 840 aa19.61■□□□□ 0.73
ALPK3-202ENST00000558077 LRRC59Q96AG4 307 aaKnown RBP19.6■□□□□ 0.73
ALPK3-202ENST00000558077 SPATA31A6Q5VVP1 1343 aa19.59■□□□□ 0.73
ALPK3-202ENST00000558077 PXDNQ92626 1479 aa19.59■□□□□ 0.73
ALPK3-202ENST00000558077 TRPM1Q7Z4N2 1603 aa19.58■□□□□ 0.73
ALPK3-202ENST00000558077 PNPLA6Q8IY17 1366 aa19.58■□□□□ 0.73
ALPK3-202ENST00000558077 MINK1Q8N4C8 1332 aaPredicted RBP19.58■□□□□ 0.73
ALPK3-202ENST00000558077 NBPF8Q3BBV2 869 aa19.58■□□□□ 0.72
ALPK3-202ENST00000558077 HIRIP3Q9BW71 556 aaPredicted RBP19.58■□□□□ 0.72
ALPK3-202ENST00000558077 FOXO3O43524 673 aa19.57■□□□□ 0.72
ALPK3-202ENST00000558077 PRR36Q9H6K5 1346 aa19.56■□□□□ 0.72
ALPK3-202ENST00000558077 NPHP3Q7Z494 1330 aa19.55■□□□□ 0.72
ALPK3-202ENST00000558077 WASLO00401 505 aaPredicted RBP19.55■□□□□ 0.72
ALPK3-202ENST00000558077 ANKARQ7Z5J8 1434 aa19.55■□□□□ 0.72
ALPK3-202ENST00000558077 KIF1AQ12756 1690 aa19.55■□□□□ 0.72
ALPK3-202ENST00000558077 XPCQ01831 940 aaPredicted RBP19.53■□□□□ 0.72
ALPK3-202ENST00000558077 PHF8Q9UPP1 1060 aa19.53■□□□□ 0.72
ALPK3-202ENST00000558077 PCGF6Q9BYE7 350 aa19.52■□□□□ 0.72
ALPK3-202ENST00000558077 TULP4Q9NRJ4 1543 aa19.51■□□□□ 0.71
ALPK3-202ENST00000558077 COL22A1Q8NFW1 1626 aaPredicted RBP19.51■□□□□ 0.71
ALPK3-202ENST00000558077 POTEAQ6S8J7 498 aa19.5■□□□□ 0.71
ALPK3-202ENST00000558077 GPRASP1Q5JY77 1395 aa19.49■□□□□ 0.71
ALPK3-202ENST00000558077 NUTM2BA6NNL0 878 aaPredicted RBP19.49■□□□□ 0.71
ALPK3-202ENST00000558077 NUTM2EB1AL46 878 aaPredicted RBP19.49■□□□□ 0.71
ALPK3-202ENST00000558077 NUTM2AQ8IVF1 878 aaPredicted RBP19.49■□□□□ 0.71
ALPK3-202ENST00000558077 KRT28Q7Z3Y7 464 aa19.48■□□□□ 0.71
ALPK3-202ENST00000558077 CDK19Q9BWU1 502 aa19.48■□□□□ 0.71
ALPK3-202ENST00000558077 ATP7BP35670 1465 aa19.48■□□□□ 0.71
ALPK3-202ENST00000558077 TONSLQ96HA7 1378 aa19.47■□□□□ 0.71
ALPK3-202ENST00000558077 PMFBP1Q8TBY8 1022 aa19.47■□□□□ 0.71
ALPK3-202ENST00000558077 SPATA31A3Q5VYP0 1347 aa19.47■□□□□ 0.71
ALPK3-202ENST00000558077 CENPJQ9HC77 1338 aaPredicted RBP19.47■□□□□ 0.71
ALPK3-202ENST00000558077 EIF3AQ14152 1382 aaKnown RBP19.46■□□□□ 0.71
ALPK3-202ENST00000558077 NUDT16Q96DE0 195 aaKnown RBP19.46■□□□□ 0.71
ALPK3-202ENST00000558077 QRICH2Q9H0J4 1663 aa19.46■□□□□ 0.71
ALPK3-202ENST00000558077 ROCK2O75116 1388 aaKnown RBP19.45■□□□□ 0.7
ALPK3-202ENST00000558077 TRPM3Q9HCF6 1732 aaPredicted RBP19.44■□□□□ 0.7
ALPK3-202ENST00000558077 TOPAZ1Q8N9V7 1692 aa19.43■□□□□ 0.7
ALPK3-202ENST00000558077 SBNO1A3KN83 1393 aa19.43■□□□□ 0.7
ALPK3-202ENST00000558077 RALGAPBQ86X10 1494 aa19.42■□□□□ 0.7
ALPK3-202ENST00000558077 MEX3CQ5U5Q3 659 aaKnown RBP19.42■□□□□ 0.7
ALPK3-202ENST00000558077 ITSN1Q15811 1721 aa19.42■□□□□ 0.7
ALPK3-202ENST00000558077 TNS3Q68CZ2 1445 aa19.41■□□□□ 0.7
ALPK3-202ENST00000558077 ADAMTS2O95450 1211 aa19.4■□□□□ 0.7
ALPK3-202ENST00000558077 PSME1Q06323 249 aa19.4■□□□□ 0.7
ALPK3-202ENST00000558077 PLEKHG3A1L390 1219 aa19.39■□□□□ 0.69
ALPK3-202ENST00000558077 CCDC61Q9Y6R9 512 aa19.39■□□□□ 0.69
ALPK3-202ENST00000558077 AFF2P51816 1311 aa19.39■□□□□ 0.69
ALPK3-202ENST00000558077 ALS2Q96Q42 1657 aa19.39■□□□□ 0.69
ALPK3-202ENST00000558077 POLR3AO14802 1390 aaPredicted RBP19.38■□□□□ 0.69
ALPK3-202ENST00000558077 CLSPNQ9HAW4 1339 aa19.38■□□□□ 0.69
ALPK3-202ENST00000558077 CABP2Q9NPB3 220 aa19.38■□□□□ 0.69
ALPK3-202ENST00000558077 MARF1Q9Y4F3 1742 aaKnown RBP19.38■□□□□ 0.69
ALPK3-202ENST00000558077 C8orf37Q96NL8 207 aa19.37■□□□□ 0.69
ALPK3-202ENST00000558077 ZNF772Q68DY9 489 aaPredicted RBP19.36■□□□□ 0.69
ALPK3-202ENST00000558077 CARD11Q9BXL7 1154 aa19.36■□□□□ 0.69
ALPK3-202ENST00000558077 ACEP12821 1306 aa19.35■□□□□ 0.69
ALPK3-202ENST00000558077 ABCA3Q99758 1704 aa19.35■□□□□ 0.69
ALPK3-202ENST00000558077 NGDNQ8NEJ9 315 aaKnown RBP19.35■□□□□ 0.69
ALPK3-202ENST00000558077 SRPK2P78362 688 aaKnown RBP19.34■□□□□ 0.69
ALPK3-202ENST00000558077 FNBP4Q8N3X1 1017 aaPredicted RBP19.34■□□□□ 0.69
ALPK3-202ENST00000558077 CABLES1Q8TDN4 633 aa19.34■□□□□ 0.69
ALPK3-202ENST00000558077 SBNO2Q9Y2G9 1366 aa19.33■□□□□ 0.69
ALPK3-202ENST00000558077 NGLY1Q96IV0 654 aa19.33■□□□□ 0.68
ALPK3-202ENST00000558077 ARHGEF10O15013 1369 aa19.32■□□□□ 0.68
ALPK3-202ENST00000558077 CRYBG1Q9Y4K1 1723 aa19.32■□□□□ 0.68
ALPK3-202ENST00000558077 PPIP5K1Q6PFW1 1433 aa19.32■□□□□ 0.68
ALPK3-202ENST00000558077 EVC2Q86UK5 1308 aa19.31■□□□□ 0.68
ALPK3-202ENST00000558077 TIMELESSQ9UNS1 1208 aa19.31■□□□□ 0.68
ALPK3-202ENST00000558077 BCL9LQ86UU0 1499 aa19.3■□□□□ 0.68
ALPK3-202ENST00000558077 CABP1Q9NZU7 370 aa19.3■□□□□ 0.68
ALPK3-202ENST00000558077 LMOD2Q6P5Q4 547 aa19.29■□□□□ 0.68
ALPK3-202ENST00000558077 QTRT2Q9H974 415 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms