RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 LRPPRCP42704 1394 aaKnown RBP23.01■■□□□ 1.27
TUBB3-214ENST00000557490 DHX57Q6P158 1386 aaKnown RBP23.01■■□□□ 1.27
TUBB3-214ENST00000557490 ROBO2Q9HCK4 1378 aa23.01■■□□□ 1.27
TUBB3-214ENST00000557490 PRAG1Q86YV5 1406 aa23■■□□□ 1.27
TUBB3-214ENST00000557490 ZRANB1Q9UGI0 708 aa23■■□□□ 1.27
TUBB3-214ENST00000557490 EP400Q96L91 3159 aa22.99■■□□□ 1.27
TUBB3-214ENST00000557490 BRINP3Q76B58 766 aa22.99■■□□□ 1.27
TUBB3-214ENST00000557490 QTRT2Q9H974 415 aaKnown RBP22.99■■□□□ 1.27
TUBB3-214ENST00000557490 ATAD2Q6PL18 1390 aa22.99■■□□□ 1.27
TUBB3-214ENST00000557490 ABCC11Q96J66 1382 aa22.97■■□□□ 1.27
TUBB3-214ENST00000557490 DCCP43146 1447 aa22.97■■□□□ 1.27
TUBB3-214ENST00000557490 ADGRL3Q9HAR2 1447 aa22.97■■□□□ 1.27
TUBB3-214ENST00000557490 C8orf37Q96NL8 207 aa22.96■■□□□ 1.27
TUBB3-214ENST00000557490 YTHDC2Q9H6S0 1430 aaKnown RBP22.96■■□□□ 1.27
TUBB3-214ENST00000557490 LAMC1P11047 1609 aa22.95■■□□□ 1.26
TUBB3-214ENST00000557490 ASXL1Q8IXJ9 1541 aa22.95■■□□□ 1.26
TUBB3-214ENST00000557490 SIN3AQ96ST3 1273 aa22.95■■□□□ 1.26
TUBB3-214ENST00000557490 NHSL1Q5SYE7 1610 aa22.94■■□□□ 1.26
TUBB3-214ENST00000557490 TECPR2O15040 1411 aa22.94■■□□□ 1.26
TUBB3-214ENST00000557490 NEUROD1Q13562 356 aa22.94■■□□□ 1.26
TUBB3-214ENST00000557490 WAPLQ7Z5K2 1190 aa22.91■■□□□ 1.26
TUBB3-214ENST00000557490 SIRT1Q96EB6 747 aa22.91■■□□□ 1.26
TUBB3-214ENST00000557490 NGLY1Q96IV0 654 aa22.89■■□□□ 1.25
TUBB3-214ENST00000557490 L3MBTL2Q969R5 705 aa22.88■■□□□ 1.25
TUBB3-214ENST00000557490 PCGF6Q9BYE7 350 aa22.88■■□□□ 1.25
TUBB3-214ENST00000557490 NALCNQ8IZF0 1738 aa22.88■■□□□ 1.25
TUBB3-214ENST00000557490 MST1RQ04912 1400 aa22.87■■□□□ 1.25
TUBB3-214ENST00000557490 KNDC1Q76NI1 1749 aa22.87■■□□□ 1.25
TUBB3-214ENST00000557490 PNPLA6Q8IY17 1366 aa22.87■■□□□ 1.25
TUBB3-214ENST00000557490 LRRC59Q96AG4 307 aaKnown RBP22.86■■□□□ 1.25
TUBB3-214ENST00000557490 PLEKHH1Q9ULM0 1364 aa22.86■■□□□ 1.25
TUBB3-214ENST00000557490 ADGRB1O14514 1584 aa22.85■■□□□ 1.25
TUBB3-214ENST00000557490 PRAM1Q96QH2 718 aa22.84■■□□□ 1.25
TUBB3-214ENST00000557490 POGKQ9P215 609 aa22.84■■□□□ 1.25
TUBB3-214ENST00000557490 TRAK1Q9UPV9 953 aa22.84■■□□□ 1.25
TUBB3-214ENST00000557490 DLC1Q96QB1 1528 aa22.82■■□□□ 1.24
TUBB3-214ENST00000557490 ADAMTS2O95450 1211 aa22.81■■□□□ 1.24
TUBB3-214ENST00000557490 C1orf167Q5SNV9 1468 aa22.8■■□□□ 1.24
TUBB3-214ENST00000557490 SAFB2Q14151 953 aaKnown RBP eCLIP22.8■■□□□ 1.24
TUBB3-214ENST00000557490 DDX17Q92841 729 aaKnown RBP22.79■■□□□ 1.24
TUBB3-214ENST00000557490 CDC42BPGQ6DT37 1551 aa22.79■■□□□ 1.24
TUBB3-214ENST00000557490 CCDC125Q86Z20 511 aa22.77■■□□□ 1.24
TUBB3-214ENST00000557490 USP21Q9UK80 565 aa22.77■■□□□ 1.24
TUBB3-214ENST00000557490 TRPC5Q9UL62 973 aaPredicted RBP22.77■■□□□ 1.24
TUBB3-214ENST00000557490 TONSLQ96HA7 1378 aa22.76■■□□□ 1.23
TUBB3-214ENST00000557490 NBPF1Q3BBV0 1214 aa22.76■■□□□ 1.23
TUBB3-214ENST00000557490 LRP5O75197 1615 aa22.75■■□□□ 1.23
TUBB3-214ENST00000557490 KIAA1210Q9ULL0 1709 aa22.75■■□□□ 1.23
TUBB3-214ENST00000557490 ATRNO75882 1429 aa22.74■■□□□ 1.23
TUBB3-214ENST00000557490 NUTM2FA1L443 756 aa22.74■■□□□ 1.23
TUBB3-214ENST00000557490 ESCO1Q5FWF5 840 aa22.74■■□□□ 1.23
TUBB3-214ENST00000557490 ORAI2Q96SN7 254 aa22.74■■□□□ 1.23
TUBB3-214ENST00000557490 FNBP4Q8N3X1 1017 aaPredicted RBP22.71■■□□□ 1.23
TUBB3-214ENST00000557490 MINK1Q8N4C8 1332 aaPredicted RBP22.71■■□□□ 1.23
TUBB3-214ENST00000557490 HIRIP3Q9BW71 556 aaPredicted RBP22.69■■□□□ 1.22
TUBB3-214ENST00000557490 ROCK2O75116 1388 aaKnown RBP22.66■■□□□ 1.22
TUBB3-214ENST00000557490 FMN2Q9NZ56 1722 aa22.66■■□□□ 1.22
TUBB3-214ENST00000557490 EIF3AQ14152 1382 aaKnown RBP22.65■■□□□ 1.22
TUBB3-214ENST00000557490 NPHP3Q7Z494 1330 aa22.65■■□□□ 1.22
TUBB3-214ENST00000557490 ADGRB2O60241 1585 aa22.65■■□□□ 1.22
TUBB3-214ENST00000557490 NBPF8Q3BBV2 869 aa22.65■■□□□ 1.22
TUBB3-214ENST00000557490 ARHGEF28Q8N1W1 1705 aaKnown RBP22.65■■□□□ 1.22
TUBB3-214ENST00000557490 BLMP54132 1417 aaPredicted RBP22.65■■□□□ 1.22
TUBB3-214ENST00000557490 CLSPNQ9HAW4 1339 aa22.64■■□□□ 1.22
TUBB3-214ENST00000557490 WASLO00401 505 aaPredicted RBP22.64■■□□□ 1.21
TUBB3-214ENST00000557490 SOS2Q07890 1332 aaPredicted RBP22.63■■□□□ 1.21
TUBB3-214ENST00000557490 FOXO3O43524 673 aa22.63■■□□□ 1.21
TUBB3-214ENST00000557490 ANKARQ7Z5J8 1434 aa22.63■■□□□ 1.21
TUBB3-214ENST00000557490 CENPJQ9HC77 1338 aaPredicted RBP22.62■■□□□ 1.21
TUBB3-214ENST00000557490 TRPM1Q7Z4N2 1603 aa22.62■■□□□ 1.21
TUBB3-214ENST00000557490 COL22A1Q8NFW1 1626 aaPredicted RBP22.62■■□□□ 1.21
TUBB3-214ENST00000557490 PHF8Q9UPP1 1060 aa22.62■■□□□ 1.21
TUBB3-214ENST00000557490 BCL9LQ86UU0 1499 aa22.61■■□□□ 1.21
TUBB3-214ENST00000557490 DEFB132Q7Z7B7 95 aa22.6■■□□□ 1.21
TUBB3-214ENST00000557490 CCER1Q8TC90 406 aaPredicted RBP22.59■■□□□ 1.21
TUBB3-214ENST00000557490 MARF1Q9Y4F3 1742 aaKnown RBP22.58■■□□□ 1.21
TUBB3-214ENST00000557490 XPCQ01831 940 aaPredicted RBP22.58■■□□□ 1.21
TUBB3-214ENST00000557490 CDK19Q9BWU1 502 aa22.57■■□□□ 1.2
TUBB3-214ENST00000557490 GPRASP1Q5JY77 1395 aa22.57■■□□□ 1.2
TUBB3-214ENST00000557490 TULP4Q9NRJ4 1543 aa22.57■■□□□ 1.2
TUBB3-214ENST00000557490 KIF1AQ12756 1690 aa22.56■■□□□ 1.2
TUBB3-214ENST00000557490 GJD4Q96KN9 370 aaPredicted RBP22.56■■□□□ 1.2
TUBB3-214ENST00000557490 CARD11Q9BXL7 1154 aa22.56■■□□□ 1.2
TUBB3-214ENST00000557490 PRR36Q9H6K5 1346 aa22.56■■□□□ 1.2
TUBB3-214ENST00000557490 PMFBP1Q8TBY8 1022 aa22.55■■□□□ 1.2
TUBB3-214ENST00000557490 BRWD3Q6RI45 1802 aa22.54■■□□□ 1.2
TUBB3-214ENST00000557490 RALGAPBQ86X10 1494 aa22.54■■□□□ 1.2
TUBB3-214ENST00000557490 PXDNQ92626 1479 aa22.54■■□□□ 1.2
TUBB3-214ENST00000557490 PSME1Q06323 249 aa22.54■■□□□ 1.2
TUBB3-214ENST00000557490 KRT28Q7Z3Y7 464 aa22.54■■□□□ 1.2
TUBB3-214ENST00000557490 NUDT16Q96DE0 195 aaKnown RBP22.54■■□□□ 1.2
TUBB3-214ENST00000557490 TIMELESSQ9UNS1 1208 aa22.54■■□□□ 1.2
TUBB3-214ENST00000557490 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.54■■□□□ 1.2
TUBB3-214ENST00000557490 GLI3P10071 1580 aa22.53■■□□□ 1.2
TUBB3-214ENST00000557490 USP32Q8NFA0 1604 aa22.53■■□□□ 1.2
TUBB3-214ENST00000557490 SRPK2P78362 688 aaKnown RBP22.51■■□□□ 1.19
TUBB3-214ENST00000557490 RGPD8O14715 1765 aaPredicted RBP22.5■■□□□ 1.19
TUBB3-214ENST00000557490 NGDNQ8NEJ9 315 aaKnown RBP22.5■■□□□ 1.19
TUBB3-214ENST00000557490 PSDA5PKW4 1024 aaPredicted RBP22.49■■□□□ 1.19
TUBB3-214ENST00000557490 CCDC61Q9Y6R9 512 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms