RNA–Protein interactions for RNA: ENST00000556980.5

XRCC3-217, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-217ENST00000556980 SIRT1Q96EB6 747 aa26.09■■□□□ 1.77
XRCC3-217ENST00000556980 ILDR2Q71H61 639 aa26.07■■□□□ 1.76
XRCC3-217ENST00000556980 ADGRB1O14514 1584 aa26.07■■□□□ 1.76
XRCC3-217ENST00000556980 PRAM1Q96QH2 718 aa26.05■■□□□ 1.76
XRCC3-217ENST00000556980 ORAI2Q96SN7 254 aa26.03■■□□□ 1.76
XRCC3-217ENST00000556980 DLC1Q96QB1 1528 aa26.03■■□□□ 1.76
XRCC3-217ENST00000556980 DDX17Q92841 729 aaKnown RBP26.02■■□□□ 1.76
XRCC3-217ENST00000556980 POGKQ9P215 609 aa26.02■■□□□ 1.76
XRCC3-217ENST00000556980 NHSL1Q5SYE7 1610 aa26.02■■□□□ 1.76
XRCC3-217ENST00000556980 SAFB2Q14151 953 aaKnown RBP eCLIP26.01■■□□□ 1.75
XRCC3-217ENST00000556980 TRAK1Q9UPV9 953 aa26.01■■□□□ 1.75
XRCC3-217ENST00000556980 SPATA31A6Q5VVP1 1343 aa26■■□□□ 1.75
XRCC3-217ENST00000556980 NUTM2FA1L443 756 aa25.99■■□□□ 1.75
XRCC3-217ENST00000556980 ESCO1Q5FWF5 840 aa25.99■■□□□ 1.75
XRCC3-217ENST00000556980 LRRC59Q96AG4 307 aaKnown RBP25.98■■□□□ 1.75
XRCC3-217ENST00000556980 SIN3AQ96ST3 1273 aa25.98■■□□□ 1.75
XRCC3-217ENST00000556980 NEUROD1Q13562 356 aa25.96■■□□□ 1.75
XRCC3-217ENST00000556980 SHPRHQ149N8 1683 aa25.96■■□□□ 1.75
XRCC3-217ENST00000556980 L3MBTL2Q969R5 705 aa25.93■■□□□ 1.74
XRCC3-217ENST00000556980 FMN2Q9NZ56 1722 aa25.93■■□□□ 1.74
XRCC3-217ENST00000556980 NPHP3Q7Z494 1330 aa25.92■■□□□ 1.74
XRCC3-217ENST00000556980 MEX3CQ5U5Q3 659 aaKnown RBP25.92■■□□□ 1.74
XRCC3-217ENST00000556980 SOS2Q07890 1332 aaPredicted RBP25.91■■□□□ 1.74
XRCC3-217ENST00000556980 LRP6O75581 1613 aa25.91■■□□□ 1.74
XRCC3-217ENST00000556980 NUTM2BA6NNL0 878 aaPredicted RBP25.9■■□□□ 1.74
XRCC3-217ENST00000556980 NUTM2EB1AL46 878 aaPredicted RBP25.9■■□□□ 1.74
XRCC3-217ENST00000556980 NUTM2AQ8IVF1 878 aaPredicted RBP25.9■■□□□ 1.74
XRCC3-217ENST00000556980 PNPLA6Q8IY17 1366 aa25.9■■□□□ 1.74
XRCC3-217ENST00000556980 MINK1Q8N4C8 1332 aaPredicted RBP25.89■■□□□ 1.74
XRCC3-217ENST00000556980 KIAA1210Q9ULL0 1709 aa25.89■■□□□ 1.74
XRCC3-217ENST00000556980 FOXO3O43524 673 aa25.89■■□□□ 1.74
XRCC3-217ENST00000556980 HIRIP3Q9BW71 556 aaPredicted RBP25.89■■□□□ 1.74
XRCC3-217ENST00000556980 RGS17Q9UGC6 210 aaPredicted RBP25.89■■□□□ 1.74
XRCC3-217ENST00000556980 ADGRB2O60241 1585 aa25.88■■□□□ 1.73
XRCC3-217ENST00000556980 NBPF1Q3BBV0 1214 aa25.86■■□□□ 1.73
XRCC3-217ENST00000556980 EIF3AQ14152 1382 aaKnown RBP25.85■■□□□ 1.73
XRCC3-217ENST00000556980 XPCQ01831 940 aaPredicted RBP25.85■■□□□ 1.73
XRCC3-217ENST00000556980 ANKARQ7Z5J8 1434 aa25.85■■□□□ 1.73
XRCC3-217ENST00000556980 PXDNQ92626 1479 aa25.85■■□□□ 1.73
XRCC3-217ENST00000556980 KIF1AQ12756 1690 aa25.84■■□□□ 1.73
XRCC3-217ENST00000556980 ARHGEF28Q8N1W1 1705 aaKnown RBP25.83■■□□□ 1.73
XRCC3-217ENST00000556980 SOCS7O14512 581 aa25.83■■□□□ 1.73
XRCC3-217ENST00000556980 PHF8Q9UPP1 1060 aa25.83■■□□□ 1.73
XRCC3-217ENST00000556980 WASLO00401 505 aaPredicted RBP25.81■■□□□ 1.72
XRCC3-217ENST00000556980 TULP4Q9NRJ4 1543 aa25.78■■□□□ 1.72
XRCC3-217ENST00000556980 POTEAQ6S8J7 498 aa25.78■■□□□ 1.72
XRCC3-217ENST00000556980 KRT28Q7Z3Y7 464 aa25.77■■□□□ 1.72
XRCC3-217ENST00000556980 TONSLQ96HA7 1378 aa25.77■■□□□ 1.72
XRCC3-217ENST00000556980 USP32Q8NFA0 1604 aa25.76■■□□□ 1.71
XRCC3-217ENST00000556980 PRR36Q9H6K5 1346 aa25.75■■□□□ 1.71
XRCC3-217ENST00000556980 ZNF772Q68DY9 489 aaPredicted RBP25.75■■□□□ 1.71
XRCC3-217ENST00000556980 ROCK2O75116 1388 aaKnown RBP25.74■■□□□ 1.71
XRCC3-217ENST00000556980 ADAMTS2O95450 1211 aa25.74■■□□□ 1.71
XRCC3-217ENST00000556980 PSME1Q06323 249 aa25.74■■□□□ 1.71
XRCC3-217ENST00000556980 PMFBP1Q8TBY8 1022 aa25.74■■□□□ 1.71
XRCC3-217ENST00000556980 CENPJQ9HC77 1338 aaPredicted RBP25.73■■□□□ 1.71
XRCC3-217ENST00000556980 C8orf37Q96NL8 207 aa25.73■■□□□ 1.71
XRCC3-217ENST00000556980 RGPD8O14715 1765 aaPredicted RBP25.73■■□□□ 1.71
XRCC3-217ENST00000556980 COL22A1Q8NFW1 1626 aaPredicted RBP25.73■■□□□ 1.71
XRCC3-217ENST00000556980 SPATA31A3Q5VYP0 1347 aa25.72■■□□□ 1.71
XRCC3-217ENST00000556980 TRPM1Q7Z4N2 1603 aa25.72■■□□□ 1.71
XRCC3-217ENST00000556980 AFF2P51816 1311 aa25.71■■□□□ 1.71
XRCC3-217ENST00000556980 CDK19Q9BWU1 502 aa25.7■■□□□ 1.7
XRCC3-217ENST00000556980 TNS3Q68CZ2 1445 aa25.69■■□□□ 1.7
XRCC3-217ENST00000556980 ATP7BP35670 1465 aa25.68■■□□□ 1.7
XRCC3-217ENST00000556980 NBPF8Q3BBV2 869 aa25.68■■□□□ 1.7
XRCC3-217ENST00000556980 NUDT16Q96DE0 195 aaKnown RBP25.68■■□□□ 1.7
XRCC3-217ENST00000556980 SBNO1A3KN83 1393 aa25.68■■□□□ 1.7
XRCC3-217ENST00000556980 GPRASP1Q5JY77 1395 aa25.68■■□□□ 1.7
XRCC3-217ENST00000556980 NGLY1Q96IV0 654 aa25.67■■□□□ 1.7
XRCC3-217ENST00000556980 NGDNQ8NEJ9 315 aaKnown RBP25.66■■□□□ 1.7
XRCC3-217ENST00000556980 PCGF6Q9BYE7 350 aa25.66■■□□□ 1.7
XRCC3-217ENST00000556980 LMOD2Q6P5Q4 547 aa25.65■■□□□ 1.7
XRCC3-217ENST00000556980 ARHGEF10O15013 1369 aa25.64■■□□□ 1.69
XRCC3-217ENST00000556980 SRPK2P78362 688 aaKnown RBP25.63■■□□□ 1.69
XRCC3-217ENST00000556980 QRICH2Q9H0J4 1663 aa25.63■■□□□ 1.69
XRCC3-217ENST00000556980 ITSN1Q15811 1721 aa25.62■■□□□ 1.69
XRCC3-217ENST00000556980 HAP1P54257 671 aaPredicted RBP25.61■■□□□ 1.69
XRCC3-217ENST00000556980 CCDC61Q9Y6R9 512 aa25.61■■□□□ 1.69
XRCC3-217ENST00000556980 PLEKHG5O94827 1062 aa25.6■■□□□ 1.69
XRCC3-217ENST00000556980 RALGAPBQ86X10 1494 aa25.6■■□□□ 1.69
XRCC3-217ENST00000556980 RXRBP28702 533 aa25.59■■□□□ 1.69
XRCC3-217ENST00000556980 CARD11Q9BXL7 1154 aa25.59■■□□□ 1.69
XRCC3-217ENST00000556980 CABP2Q9NPB3 220 aa25.58■■□□□ 1.69
XRCC3-217ENST00000556980 PAK3O75914 559 aaPredicted RBP25.57■■□□□ 1.68
XRCC3-217ENST00000556980 USP21Q9UK80 565 aa25.57■■□□□ 1.68
XRCC3-217ENST00000556980 TOPAZ1Q8N9V7 1692 aa25.56■■□□□ 1.68
XRCC3-217ENST00000556980 FNBP4Q8N3X1 1017 aaPredicted RBP25.56■■□□□ 1.68
XRCC3-217ENST00000556980 CABLES1Q8TDN4 633 aa25.56■■□□□ 1.68
XRCC3-217ENST00000556980 QTRT2Q9H974 415 aaKnown RBP25.56■■□□□ 1.68
XRCC3-217ENST00000556980 TRPM3Q9HCF6 1732 aaPredicted RBP25.56■■□□□ 1.68
XRCC3-217ENST00000556980 EVC2Q86UK5 1308 aa25.56■■□□□ 1.68
XRCC3-217ENST00000556980 POLR3AO14802 1390 aaPredicted RBP25.55■■□□□ 1.68
XRCC3-217ENST00000556980 PLEKHG3A1L390 1219 aa25.54■■□□□ 1.68
XRCC3-217ENST00000556980 ACEP12821 1306 aa25.54■■□□□ 1.68
XRCC3-217ENST00000556980 PPIP5K1Q6PFW1 1433 aa25.54■■□□□ 1.68
XRCC3-217ENST00000556980 RBM6P78332 1123 aaKnown RBP25.51■■□□□ 1.67
XRCC3-217ENST00000556980 TRPC5Q9UL62 973 aaPredicted RBP25.51■■□□□ 1.67
XRCC3-217ENST00000556980 ALS2Q96Q42 1657 aa25.5■■□□□ 1.67
XRCC3-217ENST00000556980 CLSPNQ9HAW4 1339 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms