RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 ARHGEF28Q8N1W1 1705 aaKnown RBP15.1■□□□□ 0.01
SNX6-208ENST00000556712 FMN2Q9NZ56 1722 aa15.1■□□□□ 0.01
SNX6-208ENST00000556712 DLC1Q96QB1 1528 aa15.09■□□□□ 0.01
SNX6-208ENST00000556712 SIN3AQ96ST3 1273 aa15.09■□□□□ 0.01
SNX6-208ENST00000556712 KIAA1210Q9ULL0 1709 aa15.09■□□□□ 0.01
SNX6-208ENST00000556712 SHPRHQ149N8 1683 aa15.06■□□□□ 0
SNX6-208ENST00000556712 SAFB2Q14151 953 aaKnown RBP eCLIP15.06■□□□□ 0
SNX6-208ENST00000556712 DDX17Q92841 729 aaKnown RBP15.06■□□□□ 0
SNX6-208ENST00000556712 RGPD8O14715 1765 aaPredicted RBP15.06■□□□□ 0
SNX6-208ENST00000556712 NUTM2FA1L443 756 aa15.05■□□□□ -0
SNX6-208ENST00000556712 NEUROD1Q13562 356 aa15.05■□□□□ -0
SNX6-208ENST00000556712 PRAM1Q96QH2 718 aa15.05■□□□□ -0
SNX6-208ENST00000556712 TRAK1Q9UPV9 953 aa15.05■□□□□ -0
SNX6-208ENST00000556712 ADGRB2O60241 1585 aa15.04■□□□□ -0
SNX6-208ENST00000556712 ORAI2Q96SN7 254 aa15.04■□□□□ -0
SNX6-208ENST00000556712 JCADQ9P266 1359 aa15.03■□□□□ -0
SNX6-208ENST00000556712 L3MBTL2Q969R5 705 aa15.03■□□□□ -0
SNX6-208ENST00000556712 TRPM1Q7Z4N2 1603 aa15.03■□□□□ -0
SNX6-208ENST00000556712 USP32Q8NFA0 1604 aa15.03■□□□□ -0
SNX6-208ENST00000556712 STAC3Q96MF2 364 aa15.02■□□□□ -0
SNX6-208ENST00000556712 LRP6O75581 1613 aa15.02□□□□□ -0.01
SNX6-208ENST00000556712 KIF1AQ12756 1690 aa15□□□□□ -0.01
SNX6-208ENST00000556712 ILDR2Q71H61 639 aa15□□□□□ -0.01
SNX6-208ENST00000556712 SIRT1Q96EB6 747 aa15□□□□□ -0.01
SNX6-208ENST00000556712 POGKQ9P215 609 aa15□□□□□ -0.01
SNX6-208ENST00000556712 NBPF1Q3BBV0 1214 aa14.99□□□□□ -0.01
SNX6-208ENST00000556712 HIRIP3Q9BW71 556 aaPredicted RBP14.99□□□□□ -0.01
SNX6-208ENST00000556712 MINK1Q8N4C8 1332 aaPredicted RBP14.98□□□□□ -0.01
SNX6-208ENST00000556712 ESCO1Q5FWF5 840 aa14.98□□□□□ -0.01
SNX6-208ENST00000556712 QRICH2Q9H0J4 1663 aa14.97□□□□□ -0.01
SNX6-208ENST00000556712 PXDNQ92626 1479 aa14.97□□□□□ -0.01
SNX6-208ENST00000556712 PCGF6Q9BYE7 350 aa14.96□□□□□ -0.01
SNX6-208ENST00000556712 TULP4Q9NRJ4 1543 aa14.96□□□□□ -0.02
SNX6-208ENST00000556712 PNPLA6Q8IY17 1366 aa14.96□□□□□ -0.02
SNX6-208ENST00000556712 XPCQ01831 940 aaPredicted RBP14.95□□□□□ -0.02
SNX6-208ENST00000556712 SOS2Q07890 1332 aaPredicted RBP14.94□□□□□ -0.02
SNX6-208ENST00000556712 TONSLQ96HA7 1378 aa14.94□□□□□ -0.02
SNX6-208ENST00000556712 SPATA31A6Q5VVP1 1343 aa14.93□□□□□ -0.02
SNX6-208ENST00000556712 COL22A1Q8NFW1 1626 aaPredicted RBP14.93□□□□□ -0.02
SNX6-208ENST00000556712 ITSN1Q15811 1721 aa14.93□□□□□ -0.02
SNX6-208ENST00000556712 ANKARQ7Z5J8 1434 aa14.92□□□□□ -0.02
SNX6-208ENST00000556712 NUTM2BA6NNL0 878 aaPredicted RBP14.92□□□□□ -0.02
SNX6-208ENST00000556712 NUTM2EB1AL46 878 aaPredicted RBP14.92□□□□□ -0.02
SNX6-208ENST00000556712 FOXO3O43524 673 aa14.92□□□□□ -0.02
SNX6-208ENST00000556712 NBPF8Q3BBV2 869 aa14.92□□□□□ -0.02
SNX6-208ENST00000556712 NUTM2AQ8IVF1 878 aaPredicted RBP14.92□□□□□ -0.02
SNX6-208ENST00000556712 LRRC59Q96AG4 307 aaKnown RBP14.92□□□□□ -0.02
SNX6-208ENST00000556712 RGS17Q9UGC6 210 aaPredicted RBP14.92□□□□□ -0.02
SNX6-208ENST00000556712 TOPAZ1Q8N9V7 1692 aa14.92□□□□□ -0.02
SNX6-208ENST00000556712 NPHP3Q7Z494 1330 aa14.92□□□□□ -0.02
SNX6-208ENST00000556712 PRR36Q9H6K5 1346 aa14.92□□□□□ -0.02
SNX6-208ENST00000556712 ATP7BP35670 1465 aa14.91□□□□□ -0.02
SNX6-208ENST00000556712 ROCK2O75116 1388 aaKnown RBP14.91□□□□□ -0.02
SNX6-208ENST00000556712 WASLO00401 505 aaPredicted RBP14.9□□□□□ -0.02
SNX6-208ENST00000556712 MEX3CQ5U5Q3 659 aaKnown RBP14.9□□□□□ -0.02
SNX6-208ENST00000556712 TRPM3Q9HCF6 1732 aaPredicted RBP14.89□□□□□ -0.03
SNX6-208ENST00000556712 PMFBP1Q8TBY8 1022 aa14.89□□□□□ -0.03
SNX6-208ENST00000556712 PHF8Q9UPP1 1060 aa14.89□□□□□ -0.03
SNX6-208ENST00000556712 RALGAPBQ86X10 1494 aa14.89□□□□□ -0.03
SNX6-208ENST00000556712 EIF3AQ14152 1382 aaKnown RBP14.88□□□□□ -0.03
SNX6-208ENST00000556712 ABCA3Q99758 1704 aa14.88□□□□□ -0.03
SNX6-208ENST00000556712 CENPJQ9HC77 1338 aaPredicted RBP14.88□□□□□ -0.03
SNX6-208ENST00000556712 MARF1Q9Y4F3 1742 aaKnown RBP14.87□□□□□ -0.03
SNX6-208ENST00000556712 TNS3Q68CZ2 1445 aa14.86□□□□□ -0.03
SNX6-208ENST00000556712 GPRASP1Q5JY77 1395 aa14.85□□□□□ -0.03
SNX6-208ENST00000556712 POTEAQ6S8J7 498 aa14.85□□□□□ -0.03
SNX6-208ENST00000556712 KRT28Q7Z3Y7 464 aa14.85□□□□□ -0.03
SNX6-208ENST00000556712 CDK19Q9BWU1 502 aa14.85□□□□□ -0.03
SNX6-208ENST00000556712 ALS2Q96Q42 1657 aa14.84□□□□□ -0.03
SNX6-208ENST00000556712 SPATA31A3Q5VYP0 1347 aa14.84□□□□□ -0.03
SNX6-208ENST00000556712 ADAMTS2O95450 1211 aa14.83□□□□□ -0.04
SNX6-208ENST00000556712 NUDT16Q96DE0 195 aaKnown RBP14.83□□□□□ -0.04
SNX6-208ENST00000556712 PLEKHG5O94827 1062 aa14.82□□□□□ -0.04
SNX6-208ENST00000556712 C8orf37Q96NL8 207 aa14.82□□□□□ -0.04
SNX6-208ENST00000556712 CRYBG1Q9Y4K1 1723 aa14.81□□□□□ -0.04
SNX6-208ENST00000556712 PSME1Q06323 249 aa14.81□□□□□ -0.04
SNX6-208ENST00000556712 AFF2P51816 1311 aa14.81□□□□□ -0.04
SNX6-208ENST00000556712 SBNO1A3KN83 1393 aa14.81□□□□□ -0.04
SNX6-208ENST00000556712 SRPK2P78362 688 aaKnown RBP14.8□□□□□ -0.04
SNX6-208ENST00000556712 CARD11Q9BXL7 1154 aa14.8□□□□□ -0.04
SNX6-208ENST00000556712 CABP2Q9NPB3 220 aa14.8□□□□□ -0.04
SNX6-208ENST00000556712 LMOD2Q6P5Q4 547 aa14.79□□□□□ -0.04
SNX6-208ENST00000556712 PPIP5K1Q6PFW1 1433 aa14.79□□□□□ -0.04
SNX6-208ENST00000556712 NGDNQ8NEJ9 315 aaKnown RBP14.79□□□□□ -0.04
SNX6-208ENST00000556712 PLCH1Q4KWH8 1693 aa14.78□□□□□ -0.04
SNX6-208ENST00000556712 SOCS7O14512 581 aa14.78□□□□□ -0.04
SNX6-208ENST00000556712 PHRF1Q9P1Y6 1649 aaKnown RBP14.77□□□□□ -0.04
SNX6-208ENST00000556712 ARHGEF10O15013 1369 aa14.77□□□□□ -0.04
SNX6-208ENST00000556712 ZNF772Q68DY9 489 aaPredicted RBP14.77□□□□□ -0.05
SNX6-208ENST00000556712 CABLES1Q8TDN4 633 aa14.77□□□□□ -0.05
SNX6-208ENST00000556712 POLR3AO14802 1390 aaPredicted RBP14.76□□□□□ -0.05
SNX6-208ENST00000556712 NGLY1Q96IV0 654 aa14.76□□□□□ -0.05
SNX6-208ENST00000556712 AKAP12Q02952 1782 aa14.75□□□□□ -0.05
SNX6-208ENST00000556712 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.75□□□□□ -0.05
SNX6-208ENST00000556712 ACEP12821 1306 aa14.75□□□□□ -0.05
SNX6-208ENST00000556712 EVC2Q86UK5 1308 aa14.75□□□□□ -0.05
SNX6-208ENST00000556712 PAK3O75914 559 aaPredicted RBP14.75□□□□□ -0.05
SNX6-208ENST00000556712 CCDC61Q9Y6R9 512 aa14.75□□□□□ -0.05
SNX6-208ENST00000556712 SBNO2Q9Y2G9 1366 aa14.74□□□□□ -0.05
SNX6-208ENST00000556712 CLSPNQ9HAW4 1339 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms